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Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL
Open accessAbstract
TRANSFAC, TRRD (Transcription Regulatory Region Database) and COMPEL are databases which store information about transcriptional regulation in eukaryotic cells. The three databases provide distinct views on the components involved in transcription: transcription factors and their binding sites and binding profiles (TRANSFAC), the regulatory hierarchy of whole genes (TRRD), and the structural and functional properties of composite elements (COMPEL). The quantitative and qualitative changes of all three databases and connected programs are described. The databases are accessible via WWW:http://transfac.gbf.de/TRANSFAC orhttp://www.bionet.nsc.ru/TRRD
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Cited by
Plant cis-acting regulatory DNA elements (PLACE) database: 1999
Higo, K., Ugawa, Y., Iwamoto, M., & Korenaga, T. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.297 · Cited by 3,381
Shiraki, T., Kondo, S., Katayama, S., Waki, K., Kasukawa, T., Kawaji, H., Kodzius, R., Watahiki, A., Nakamura, M., Arakawa, T., et al. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2136655100 · Cited by 773
Synnestvedt, K., Furuta, G. T., Comerford, K. M., Louis, N., Karhausen, J., Eltzschig, H. K., Hansen, K. R., Thompson, L. F., & Colgan, S. P. (2002) · Journal of Clinical Investigation · doi:10.1172/jci0215337 · Cited by 660
Identification of Novel, Functional Genetic Variants in the Human Matrix Metalloproteinase-2 Gene
Price, S. J., Greaves, D. R., & Watkins, H. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m010242200 · Cited by 406
Eiberg, H., Troelsen, J., Nielsen, M., Mikkelsen, A., Mengel-From, J., Kjaer, K. W., & Hansen, L. (2008) · Human Genetics · doi:10.1007/s00439-007-0460-x · Cited by 346
Metadata
- Authors
- Heinemeyer, T.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 1998-01-01
- Volume
- 26
- Issue
- 1
- Pages
- 362-367
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2151625863
- Cited by
- 1,451
- References
- 0
- FWCI
- 34.55
- Type
- journal article
- Language
- en
- Open access
- bronze
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