The DOI matches its Crossref record; 27 of the 27 references it cites were found in a registry or an index.
Database resources of the National Center for Biotechnology Information
Open accessAbstract
The National Center for Biotechnology Information (NCBI) provides a large suite of online resources for biological information and data, including the GenBank® nucleic acid sequence database and the PubMed® database of citations and abstracts published in life science journals. The Entrez system provides search and retrieval operations for most of these data from 34 distinct databases. The E-utilities serve as the programming interface for the Entrez system. Custom implementations of the BLAST program provide sequence-based searching of many specialized datasets. New resources released in the past year include a new PubMed interface and NCBI datasets. Additional resources that were updated in the past year include PMC, Bookshelf, Genome Data Viewer, SRA, ClinVar, dbSNP, dbVar, Pathogen Detection, BLAST, Primer-BLAST, IgBLAST, iCn3D and PubChem. All of these resources can be accessed through the NCBI home page at https://www.ncbi.nlm.nih.gov.
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Citations
Cites
BLAST+: architecture and applications
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., & Madden, T. L. (2009) · BMC Bioinformatics · doi:10.1186/1471-2105-10-421 · Cited by 22,074
Self-citationDatabase resources of the National Center for Biotechnology Information: update
Wheeler, D. L. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh073 · Cited by 10,641
NCBI prokaryotic genome annotation pipeline
Tatusova, T., DiCuccio, M., Badretdin, A., Chetvernin, V., Nawrocki, E. P., Zaslavsky, L., Lomsadze, A., Pruitt, K. D., Borodovsky, M., & Ostell, J. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw569 · Cited by 7,014
Self-citationPrimer-BLAST: A tool to design target-specific primers for polymerase chain reaction
Ye, J., Coulouris, G., Zaretskaya, I., Cutcutache, I., Rozen, S., & Madden, T. L. (2012) · BMC Bioinformatics · doi:10.1186/1471-2105-13-134 · Cited by 6,111
Self-citationPubChem Substance and Compound databases
Kim, S., Thiessen, P. A., Bolton, E. E., Chen, J., Fu, G., Gindulyte, A., Han, L., He, J., He, S., Shoemaker, B. A., et al. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkv951 · Cited by 5,436
Self-citationPubChem 2019 update: improved access to chemical data
Kim, S., Chen, J., Cheng, T., Gindulyte, A., He, J., He, S., Li, Q., Shoemaker, B. A., Thiessen, P. A., Yu, B., et al. (2019) · Nucleic Acids Research · doi:10.1093/nar/gky1033 · Cited by 3,249
Self-citationOPM database and PPM web server: resources for positioning of proteins in membranes
Lomize, M. A., Pogozheva, I. D., Joo, H., Mosberg, H. I., & Lomize, A. L. (2012) · Nucleic Acids Research · doi:10.1093/nar/gkr703 · Cited by 2,151
Feldgarden, M., Brover, V., Haft, D. H., Prasad, A. B., Slotta, D. J., Tolstoy, I., Tyson, G. H., Zhao, S., Hsu, C.-H., McDermott, P. F., et al. (2019) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00483-19 · Cited by 1,459
Self-citationBLAST: a more efficient report with usability improvements
Boratyn, G. M., Camacho, C., Cooper, P. S., Coulouris, G., Fong, A., Ma, N., Madden, T. L., Matten, W. T., McGinnis, S. D., Merezhuk, Y., et al. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt282 · Cited by 1,369
Self-citationIgBLAST: an immunoglobulin variable domain sequence analysis tool
Ye, J., Ma, N., Madden, T. L., & Ostell, J. M. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt382 · Cited by 1,189
Self-citation
Research works printed but not linked: 1
- Sayers, 2020, GenBank, Nucleic Acids Res., 48, D84
Cited by
Database resources of the national center for biotechnology information
Sayers, E. W., Bolton, E. E., Brister, J. R., Canese, K., Chan, J., Comeau, D. C., Connor, R., Funk, K., Kelly, C., Kim, S., et al. (2022) · Nucleic Acids Research · doi:10.1093/nar/gkab1112 · Cited by 2,812
Self-citationJASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles
Castro-Mondragon, J. A., Riudavets-Puig, R., Rauluseviciute, I., Berhanu Lemma, R., Turchi, L., Blanc-Mathieu, R., Lucas, J., Boddie, P., Khan, A., Manosalva Pérez, N., et al. (2022) · Nucleic Acids Research · doi:10.1093/nar/gkab1113 · Cited by 1,935
Genenames.org: the HGNC resources in 2023
Seal, R. L., Braschi, B., Gray, K., Jones, T. E. M., Tweedie, S., Haim-Vilmovsky, L., & Bruford, E. A. (2023) · Nucleic Acids Research · doi:10.1093/nar/gkac888 · Cited by 527
Therapeutic siRNA: State-of-the-Art and Future Perspectives
Friedrich, M., & Aigner, A. (2022) · BioDrugs · doi:10.1007/s40259-022-00549-3 · Cited by 396
A positive correlation between GC content and growth temperature in prokaryotes
Hu, E.-Z., Lan, X.-R., Liu, Z.-L., Gao, J., & Niu, D.-K. (2022) · BMC Genomics · doi:10.1186/s12864-022-08353-7 · Cited by 135
Metadata
- Authors
- Sayers, E. W., Beck, J., Bolton, E. E., Bourexis, D., Brister, J. R., Canese, K., Comeau, D. C., Funk, K., Kim, S., Klimke, W., Marchler-Bauer, A., Landrum, M., Lathrop, S., Lu, Z., Madden, T. L., O’Leary, N., Phan, L., Rangwala, S. H., Schneider, V. A., Skripchenko, Y., Wang, J., Ye, J., Trawick, B. W., Pruitt, K. D., & Sherry, S. T.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2020-10-23
- Volume
- 49
- Issue
- D1
- Pages
- D10-D17
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W4247001379
- Cited by
- 962
- References
- 27
- FWCI
- 36.93
- Type
- journal article
- Language
- en
- Open access
- gold
- Funders
- National Institutes of Health
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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- CoChat. (2026). Citation check: Database resources of the National Center for Biotechnology Information. https://app.cochat.ai/papers/10.1093/nar/gkaa892
- The paper
- Sayers, E. W., Beck, J., Bolton, E. E., Bourexis, D., Brister, J. R., Canese, K., Comeau, D. C., Funk, K., Kim, S., Klimke, W., Marchler-Bauer, A., Landrum, M., Lathrop, S., Lu, Z., Madden, T. L., O’Leary, N., Phan, L., Rangwala, S. H., Schneider, V. A., . . . Sherry, S. T. (2021). Database resources of the National Center for Biotechnology Information. Nucleic Acids Research. https://doi.org/10.1093/nar/gkaa892
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
