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Cited by 1,790

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JASPAR: an open-access database for eukaryotic transcription factor binding profiles

Open access
Sandelin, A.·2004·Nucleic Acids Research

Abstract

The analysis of regulatory regions in genome sequences is strongly based on the detection of potential transcription factor binding sites. The preferred models for representation of transcription factor binding specificity have been termed position-specific scoring matrices. JASPAR is an open-access database of annotated, high-quality, matrix-based transcription factor binding site profiles for multicellular eukaryotes. The profiles were derived exclusively from sets of nucleotide sequences experimentally demonstrated to bind transcription factors. The database is complemented by a web interface for browsing, searching and subset selection, an online sequence analysis utility and a suite of programming tools for genome-wide and comparative genomic analysis of regulatory regions. JASPAR is available at http://jaspar. cgb.ki.se.

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Metadata

Authors
Sandelin, A.
Venue
Nucleic Acids Research
Published
2004-01-01
Volume
32
Issue
90001
Pages
91D-94
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
OpenAlex
W2084620487
Cited by
1,790
References
2
FWCI
18.77
Type
journal article
Language
en
Open access
hybrid

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CoChat. (2026). Citation check: JASPAR: an open-access database for eukaryotic transcription factor binding profiles. https://app.cochat.ai/papers/10.1093/nar/gkh012
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Sandelin, A. (2004). JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Research. https://doi.org/10.1093/nar/gkh012

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