ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes

Ovcharenko, I., Nobrega, M. A., Loots, G. G., Stubbs, L.·2004·Nucleic Acids Research

Cited by (519)

Items 201–300 of 519

  1. LSD1-mediated repression of GFI1 super-enhancer plays an essential role in erythroleukemia
    Goichi Tatsumi, Masahiro Kawahara, Ryusuke Yamamoto, Masakatsu Hishizawa, Katsuyuki Kito, Takayoshi Suzuki, Akifumi Takaori‐Kondo, Akira Andoh · 2019 · Leukemia
  2. JunB Is Critical for Survival of T Helper Cells
    Tsung-han Hsieh, Daiki Sasaki, Naoyuki Taira, Hsiao-Chiao Chien, Shukla Sarkar, Yu Seto, Mio Miyagi, Hiroki Ishikawa · 2022 · Frontiers in Immunology
  3. GFI1B controls its own expression binding to multiple sites
    Eduardo Anguita, Ana Villegas, Francisco J. Iborra, A. Hernandez · 2009 · Haematologica
  4. Biotinidase deficiency: Genotype-biochemical phenotype association in Brazilian patients
    Taciane Borsatto, Fernanda Sperb‐Ludwig, Samyra Espindola Lima, Maria Raquel Santos Carvalho, Pablo Augusto de Souza Fonseca, José Simon Camelo, Erlane Marques Ribeiro, Paula Frassinetti Vasconcelos de Medeiros, Charles Marques Lourenço, Carolina Fischinger Moura de Souza et al. · 2017 · PLoS ONE
  5. Secondary enhancers synergise with primary enhancers to guarantee fine-tuned muscle gene expression
    Lucía Guerrero, Raquel Marco-Ferreres, Antonio L. Serrano, Juan J. Arredondo, Margarita Cervera · 2009 · Developmental Biology
  6. Basal PIR expression in HeLa cells is driven by NRF2 via evolutionary conserved antioxidant response element
    Kamil Brzóska, Tomasz Maciej Stępkowski, Marcin K. Kruszewski · 2014 · Molecular and Cellular Biochemistry
  7. A remote and highly conserved enhancer supports amygdala specific expression of the gene encoding the anxiogenic neuropeptide substance-P
    Scott Davidson, Kerry Ann Miller, A Dowell, A Gildea, Alasdair MacKenzie · 2006 · Molecular Psychiatry
  8. The Human C‐Type Lectin‐Like Receptor CLEC‐1 is Upregulated by TGF‐β and Primarily Localized in the Endoplasmic Membrane Compartment
    Susanne Sattler, D. Reiche, Caterina Sturtzel, I. Karas, Sophie von Richter, Madeleine L. Kalb, Wolfgang Gregor, Erhard Hofer · 2011 · Scandinavian Journal of Immunology
  9. Differential roles for ETS, CREB, and EGR binding sites in mediating VEGF receptor 1 expression in vivo
    Enjing Jin, Ju Liu, Jun‐ichi Suehiro, Lei Yuan, Yoshiaki Okada, Vesna Nikolova-Krstevski, Kiichiro Yano, Lauren Janes, David L. Beeler, Katherine Spokes et al. · 2009 · Blood
  10. BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression
    Batya Cohen, Hanoch Tempelhof, Tal Raz, Roni Oren, Julian Nicenboim, Filip Bochner, Ron Even, Adam Jelinski, Raya Eilam, Shifra Ben‐Dor et al. · 2020 · Life Science Alliance
  11. The identification and functional characterisation of conserved regulatory elements in developmental genes
    Thomas Dickmeis · 2005 · Briefings in Functional Genomics and Proteomics
  12. Complex organisation and structure of the ghrelin antisense strand gene GHRLOS, a candidate non-coding RNA gene
    Inge Seim, Shea L. Carter, Adrian C. Herington, Lisa K. Chopin · 2008 · BMC Molecular Biology
  13. Tools and strategies for physiological genomics: the Rat Genome Database
    Simon N. Twigger, Dean Pasko, Jeff Nie, Mary E. Shimoyama, Susan K. Bromberg, Dan Campbell, Jiali Chen, Norberto dela Cruz, Chunyu Fan, C. N. Foote et al. · 2005 · Physiological Genomics
  14. Similarities and differences of X and Y chromosome homologous genes, SRY and SOX3, in regulating the renin-angiotensin system promoters
    Fabiano Conde Araujo, Amy Milsted, Ingrid Kazue Mizuno Watanabe, Helen Lima Del Puerto, Robson A.S. Santos, Jozef Lazar, Fernando Marcos dos Reis, Jeremy W. Prokop · 2015 · Physiological Genomics
  15. Muscle regulatory factors regulate T1R3 taste receptor expression
    Shoichiro Kokabu, Jonathan Wayne Lowery, Takashi Toyono, Yuji Seta, Suzuro Hitomi, Tsuyoshi Sato, Yuichiro Enoki, Masahiko Okubo, Yosuke Fukushima, Tetsuya Yoda · 2015 · Biochemical and Biophysical Research Communications
  16. COUP-TFI/Nr2f1 Orchestrates Intrinsic Neuronal Activity during Development of the Somatosensory Cortex
    Isabel del Pino, Chiara Tocco, Elia Magrinelli, Andrea Marcantoni, Celeste Ferraguto, Giulia Tomagra, Michele Bertacchi, Christian Alfano, Xavier Leinekugel, Andreas Frick et al. · 2020 · Cerebral Cortex
  17. TLR4-RelA-miR-30a signal pathway regulates Th17 differentiation during experimental autoimmune encephalomyelitis development
    Xuebin Qu, Jingjing Han, Ying Zhang, Xing-Qi Wang, Hongbin Fan, F. Hua, Rui-Qin Yao · 2019 · Journal of Neuroinflammation
  18. A Ftz-F1-Containing Yeast Artificial Chromosome Recapitulates Expression of Steroidogenic Factor 1 in Vivo
    Tatiana Karpova, Jeremy Presley, Rengasamy R. Manimaran, Serge Scherrer, Lovella V. Tejada, Kenneth R. Peterson, Leslie L. Heckert · 2005 · Molecular Endocrinology
  19. The impact of comparative genomics on infectious disease research
    Ren Zhang, Chun‐Ting Zhang · 2006 · Microbes and Infection
  20. FOXC1 regulates endothelial CD98 (LAT1/4F2hc) expression in retinal angiogenesis and blood-retina barrier formation
    Teena Bhakuni, Pieter R. Norden, Naoto Ujiie, Can Tan, Sun Kyong Lee, Thomas R. Tedeschi, Yi-Wen Hsieh, Ying Wang, Ting Liu, Amani A. Fawzi et al. · 2024 · Nature Communications
  21. UCbase 2.0: ultraconserved sequences database (2014 update)
    Vincenzo Lomonaco, Riccardo Martoglia, Federica Mandreoli, Laura Anderlucci, Warren Emmett, Silvio Bicciato, Cristian Taccioli · 2014 · Database
  22. HIF-1 regulation of miR-29c impairs SERCA2 expression and cardiac contractility
    Allison Lesher Williams, Chad B. Walton, Keith A. MacCannell, Abigail Avelar, Ralph V. Shohet · 2018 · American Journal of Physiology-Heart and Circulatory Physiology
  23. A bioinformatic and computational study of myosin phosphatase subunit diversity
    Rachael P. Dippold, Steven A. Fisher · 2014 · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology
  24. A predicted hairpin cluster correlates with barriers to PCR, sequencing and possibly BAC recombineering
    Brian L. Nelms, Patricia Ann Labosky · 2011 · Scientific Reports
  25. Differential regulation of Gli proteins by Sufu in the lung affects PDGF signaling and myofibroblast development
    Chuwen Lin, Miao-Hsueh Chen, Erica Yao, Hai Song, Rhodora Gacayan, Chi‐chung Hui, Pao‐Tien Chuang · 2014 · Developmental Biology
  26. GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs
    Anil Goud Jegga, Jing Chen, Siva Gowrisankar, M. A. Deshmukh, Ranga Chandra Gudivada, S. Kong, Vinod Kaimal, Bruce J. Aronow · 2006 · Nucleic Acids Research
  27. Association of common variants in TOMM40/APOE/APOC1 region with human longevity in a Chinese population
    Rong Lin, Yunxia Zhang, Dongjing Yan, Xiaoping Liao, Gu Gong, Junjie Hu, Yun‐Xin Fu, Wangwei Cai · 2015 · Journal of Human Genetics
  28. PLAG1 and USF2 Co-regulate Expression of Musashi-2 in Human Hematopoietic Stem and Progenitor Cells
    Muluken S. Belew, Sonam Bhatia, Ava Keyvani Chahi, Stefan Rentas, Jonathan S. Draper, Kristin J. Hope · 2018 · Stem Cell Reports
  29. Genomic multiple sequence alignments: refinement using a genetic algorithm
    Chunlin Wang, Elliot J. Lefkowitz · 2005 · BMC Bioinformatics
  30. An Ultraconserved Element (UCE) controls homeostatic splicing of ARGLU1 mRNA
    Stephan P. Pirnie, Ahmad Osman, Yinzhou Zhu, Gordon Carmichael · 2016 · Nucleic Acids Research
  31. Identification of an intronic enhancer regulating RANKL expression in osteocytic cells
    Minglu Yan, Masayuki Tsukasaki, Ryunosuke Muro, Yutaro Ando, Kazutaka Nakamura, Noriko Komatsu, Takeshi Nitta, Tadashi Okamura, Kazuo Okamoto, Hiroshi Takayanagi · 2023 · Bone Research
  32. Notch signaling regulates remodeling and vessel diameter in the extraembryonic yolk sac
    Jessica N Copeland, Yi Feng, Naveen Kumar Neradugomma, Patrick E. Fields, Jay L. Vivian · 2011 · BMC Developmental Biology
  33. Transcriptional activation of the IL31 gene by NFAT and STAT6
    Keunhee Park, Joo‐Hong Park, Wookjin Yang, Jongjoo Lee, Min‐Ji Song, Hyoung‐Pyo Kim · 2011 · Journal of Leukocyte Biology
  34. Identification and Analysis of Conserved cis-Regulatory Regions of the MEIS1 Gene
    José Luís Royo, José Bessa, Carmen Herrera Hidalgo, Ana Fernández‐Miñán, Juan J. Tena, Yolanda Roncero, José Luis Gómez-Skármeta, Fernando Casares · 2012 · PLoS ONE
  35. Bioinformatics Analysis of Evolution and Human Disease Related Transposable Element-Derived microRNAs
    Hee-Eun Lee, Jae‐Won Huh, Heui‐Soo Kim · 2020 · Life
  36. Identification of a long non-coding RNA gene, growth hormone secretagogue receptor opposite strand, which stimulates cell migration in non-small cell lung cancer cell lines
    Eliza Whiteside, Inge Seim, JANA P. PAULI, Angela J. O’Keeffe, Patrick B. Thomas, Shea L. Carter, Carina Walpole, Jenny N. Fung, Peter F. Josh, Adrian C. Herington et al. · 2013 · International Journal of Oncology
  37. Hepatitis C Virus Driven AXL Expression Suppresses the Hepatic Type I Interferon Response
    Scott A. Read, Enoch S. E. Tay, Mahsa Shahidi, Kate S. O'Connor, David Richmond Booth, Jacob George, Mark W. Douglas · 2015 · PLoS ONE
  38. Characterization of human mitochondrial ferritin promoter: identification of transcription factors and evidences of epigenetic control
    Michela Guaraldo, Paolo Santambrogio, Elisabetta Rovelli, Augusta Di Savino, Giuseppe Nicola Saglio, Davide Cittaro, Antonella Roetto, Sonia Levi · 2016 · Scientific Reports
  39. DCC functions as an accelerator of thalamocortical axonal growth downstream of spontaneous thalamic activity
    Mar Castillo‐Paterna, Verónica Moreno‐Juan, Anton Filipchuk, Luis Miguel Rodríguez-Malmierca, Rafael Susín, Guillermina López‐Bendito · 2015 · EMBO Reports
  40. IP3R-mediated Ca2+ signals govern hematopoietic and cardiac divergence of Flk1+ cells via the calcineurin–NFATc3–Etv2 pathway
    Yijie Wang, Jijun Huang, Wenqiang Liu, Xiaochen Kou, Huayuan Tang, Hong Wang, Xiujian Yu, Shaorong Gao, Kunfu Ouyang, Huang‐Tian Yang · 2017 · Journal of Molecular Cell Biology
  41. Synthetic essentiality between PTEN and core dependency factor PAX7 dictates rhabdomyosarcoma identity
    Casey G. Langdon, Katherine E. Gadek, Matthew R. Garcia, Myron K. Evans, Kristin B. Reed, Madeline Bush, Jason A. Hanna, Catherine J. Drummond, Matthew C. Maguire, Patrick J. Leavey et al. · 2021 · Nature Communications
  42. Differential Etv2 threshold requirement for endothelial and erythropoietic development
    Tanvi Sinha, Kelly Lammerts van Bueren, Diane E. Dickel, Ivana Zlatanova, Reuben Thomas, Carlos O. Lizama, Shan-Mei Xu, Ann C. Zovein, Kohta Ikegami, Ivan P. G. Moskowitz et al. · 2022 · Cell Reports
  43. AP-1 elements and TCL1 protein regulate expression of the gene encoding protein tyrosine phosphatase PTPROt in leukemia
    Tasneem Motiwala, Nicola A. O. Zanesi, Jharna Datta, Satavisha Roy, Huban Kutay, Allyn Checovich, Mohamed Kaou, Yiming Zhong, Amy Jo Johnson, David M Lucas et al. · 2011 · Blood
  44. Functional characterization of SNPs in CHRNA3/B4 intergenic region associated with drug behaviors
    Amber V. Flora, Cristian A. Zambrano, Xavier Gallego, Jill H. Miyamoto, Krista A. Johnson, Katelyn A. Cowan, Jerry A. Stitzel, Marissa A. Ehringer · 2013 · Brain Research
  45. BMP3 expression by osteoblast lineage cells is regulated by canonical Wnt signaling
    Shoichiro Kokabu, Vicki Rosen · 2017 · FEBS Open Bio
  46. Comparative Genomics for Detecting Human Disease Genes
    Carol Moreno, Jozef Lazar, Howard J. Jacob, Anne E. Kwitek · 2008 · Advances in genetics
  47. Identifying synonymous regulatory elements in vertebrate genomes
    Ivan Ovcharenko, Marcelo A. Nóbrega · 2005 · Nucleic Acids Research
  48. Regulation of the Orphan Nuclear Receptor Nr2f2 by the DFNA15 Deafness Gene Pou4f3
    Chrysostomos Tornari, Emily R. Towers, Jonathan E. Gale, Sally J. Dawson · 2014 · PLoS ONE
  49. Unfolded protein response factor ATF6 augments T helper cell responses and promotes mixed granulocytic airway inflammation
    Dandan Wu, Xing Y. Zhang, Kourtney M. Zimmerly, Ruoning Wang, Chunqing Wang, Russell Hunter, Xiang Yuan Wu, Matthew J. Campen, Meilian Liu, Xuexian O. Yang · 2023 · Mucosal Immunology
  50. Expression of TLE3 by bone marrow stromal cells is regulated by canonical Wnt signaling
    Shoichiro Kokabu, Tsuyoshi Sato, Satoshi Ohte, Yuichiro Enoki, Masahiko Okubo, Naoki Hayashi, Junya Nojima, Sho Tsukamoto, Yosuke Fukushima, Yasuaki Sakata et al. · 2014 · FEBS Letters
  51. Alternative splicing of human peroxisome proliferator-activated receptor delta (PPARdelta):effects on translation efficiency and trans-activation ability
    Kerstin Lundell, Petra Thulin, Anders Hamsten, Ewa Ehrenborg · 2007 · BMC Molecular Biology
  52. Long-Range Regulatory Synergy Is Required to Allow Control of the TAC1 Locus by MEK/ERK Signalling in Sensory Neurones
    Lynne J. Shanley, Scott Davidson, Marissa Lear, Anil K. Thotakura, Iain J. McEwan, Ruth A. Ross, Alasdair MacKenzie · 2010 · Neurosignals
  53. Predicting tissue specific cis-regulatory modules in the human genome using pairs of co-occurring motifs
    Hani Z. Girgis, Ivan Ovcharenko · 2012 · BMC Bioinformatics
  54. Regulation of MEIS1 by distal enhancer elements in acute leukemia
    Q-f Wang, Y J Li, J-f Dong, Bingjie Li, Joseph J. Kaberlein, L Zhang, F.E. Arimura, Roger T. Luo, J Ni, Fuhong He et al. · 2013 · Leukemia
  55. LEF ‐1 regulates proliferation and MMP ‐7 transcription in breast cancer cells
    Vesna Bucan, Katharina Mandel, Catharina Bertram, Andrea Lazaridis, Kerstin Reimers, Tjoung‐Won Park‐Simon, Peter Maria Vogt, Ralf Hass · 2012 · Genes to Cells
  56. Widespread Ultraconservation Divergence in Primates
    Ivan Ovcharenko · 2008 · Molecular Biology and Evolution
  57. Macrophages.com: An on-line community resource for innate immunity research
    Christelle Robert, Xiang Lu, Andrew Law, Tom C. Freeman, David Arthur Hume · 2011 · Immunobiology
  58. Gata4 Blocks Somatic Cell Reprogramming By Directly Repressing Nanog
    Felipe Serrano, Carles Calatayud, Marina Blazquez, Josema Torres, José Vicente Castell, Roque Bort · 2012 · Stem Cells
  59. A CRISPR/Cas9 based engineering strategy for overexpression of multiple genes in Chinese hamster ovary cells
    Peter Eisenhut, Gerald Klanert, Marcus Weinguny, Laurenz Baier, Vaibhav Jadhav, Daniel Ivansson, Nicole Borth · 2018 · Metabolic Engineering
  60. Distal regulatory elements are required for Fshr expression, in vivo
    Brian P. Hermann, Kaori I. Hornbaker, R. R. M. Maran, Leslie L. Heckert · 2006 · Molecular and Cellular Endocrinology
  61. Enhancer decommissioning by Snail1-induced competitive displacement of TCF7L2 and down-regulation of transcriptional activators results in EPHB2 silencing
    Oskar Schnappauf, Sven Beyes, Annika Dertmann, Vivien Freihen, Patrick Frey, Sabine Jägle, Katja Rose, Tom Michoel, Rudolf Grosschedl, Andreas Hecht · 2016 · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
  62. The human desmin locus: Gene organization and LCR-mediated transcriptional control
    Jennifer L.Y. Tam, Kostas A. Triantaphyllopoulos, Helen Todd, Selina Raguz, Ton de Wit, Jennifer Elizabeth Morgan, Terence A. Partridge, Eleni Makrinou, Frank G. Grosveld, Michael Nicolas Antoniou · 2006 · Genomics
  63. A unique histone deacetylase inhibitor alters microRNA expression and signal transduction in chemoresistant ovarian cancer cells
    Curt Balch, Kaleb M. Naegeli, Seungyoon Nam, Brett Ballard, Alan Hyslop, Christina Melki, Elizabeth A. Reilly, Man‐Wook Hur, Kenneth P. Nephew · 2012 · Cancer Biology & Therapy
  64. Functional assessment of a promoter polymorphism in S100B, a putative risk variant for bipolar disorder
    Elif Dağdan, Derek W. Morris, Matthew Campbell, Matthew Hill, Matthias Rothermundt, Florian Kästner, Christa Hohoff, Christof von Eiff, Petra Krakowitzky, Michael Gill et al. · 2011 · American Journal of Medical Genetics Part B Neuropsychiatric Genetics
  65. Hyperglycemia and hyperlipidemia blunts the Insulin-Inpp5f negative feedback loop in the diabetic heart
    Danna Bai, Yajun Zhang, Mingzhi Shen, Yongfeng Sun, Qing Xia, Yingmei Zhang, Xuedong Liu, Haichang Wang, Lijun Yuan · 2016 · Scientific Reports
  66. TBR2 antagonizes retinoic acid dependent neuronal differentiation by repressing Zfp423 during corticogenesis
    Luca Massimino, Lisbeth Flores-García, Bruno Di Stefano, Gaia Colasante, Cecilia Icoresi-Mazzeo, Mattia Zaghi, Bruce A. Hamilton, Alessandro Sessa · 2018 · Developmental Biology
  67. NFAT5 up-regulates expression of the kidney-specific ubiquitin ligase gene Rnf183 under hypertonic conditions in inner-medullary collecting duct cells
    Yujiro Maeoka, Yan Ling Wu, Takumi Okamoto, Soshi Kanemoto, Xiao Peng Guo, Atsushi Saito, Rie Asada, Koji Matsuhisa, Takao Masaki, Kazunori Imaizumi et al. · 2018 · Journal of Biological Chemistry
  68. Sal‐like protein 2 upregulates p16 expression through a proximal promoter element
    Zhenghua Wu, Kebin Cheng, Lidan Shi, Zheqi Li, Hema Negi, Guangwei Gao, Suchitra Kamle, Dawei Li · 2015 · Cancer Science
  69. Proximal human FOXP3 promoter transactivated by NF-κB and negatively controlled by feedback loop and SP3
    Paul Eckerstorfer, Michael Novy, Sebastian Burgstaller-Muehlbacher, Wolfgang Paster, Herbert B. Schiller, Herbert Mayer, Hannes S. J. Stockinger · 2010 · Molecular Immunology
  70. Identifying susceptibility genes for immunological disorders: patterns, power, and proof
    Robert M. Plenge, John David Rioux · 2006 · Immunological Reviews
  71. Disrupting Smad3 potentiates immunostimulatory function of NK cells against lung carcinoma by promoting GM-CSF production
    Guang‐Yu Lian, Qingming Wang, Thomas Shiu‐Kwong Mak, Xiao-Ru Huang, Xueqing Yu, Hui Y. Lan · 2024 · Cellular and Molecular Life Sciences
  72. Hypoxia-Inducible Factor 1 Is Activated by Dysregulated Cyclin E during Mammary Epithelial Morphogenesis
    Tanushri Sengupta, Gathi Abraham, Yanfei Xu, Bruce E. Clurman, Alex C. Minella · 2011 · Molecular and Cellular Biology
  73. Novel Early Target Genes of Parathyroid Hormone-Related Peptide in Chondrocytes
    Jakomijn Hoogendam, Edwin T. Parlevliet, Razvan L. Miclea, Clemens W.G.M. Löwik, Jan Maarten Wit, Marcel Karperien · 2006 · Endocrinology
  74. A founder mutation for ichthyosis prematurity syndrome restricted to 76 kb by haplotype association
    Malin Melin, Joakim Klar, T. Jr Gedde-Dahl, Robert Fredriksson, Ingrid Haußer, F Brandrup, Anette Bygum, A. Vahlquist, Maritta Hellström Pigg, Niklas Dahl · 2006 · Journal of Human Genetics
  75. Early growth response 1 is an early signal inducing Cav3.2 T-type calcium channels during cardiac hypertrophy
    Shao‐Chun Hsu, Ya-Ting Chang, Chien‐Chang Chen · 2013 · Cardiovascular Research
  76. Incorporating tree‐thinking and evolutionary time scale into developmental biology
    Shigehiro Kuraku, Nathalie Feiner, Sean D. Keeley, Yuichiro Hara · 2016 · Development Growth & Differentiation
  77. C-Reactive Protein Gene Contributes to the Genetic Susceptibility of Hemorrhagic Stroke in Men: a Case-Control Study in Chinese Han Population
    Yong Xue, Long Zhang, Yao Fan, Qian-hui Li, Yuzhang Jiang, Chong Shen · 2017 · Journal of Molecular Neuroscience
  78. Non-coding genetic variation shaping mental health
    John Peter Quinn, Abigail L. Pfaff, Vivien J. Bubb · 2018 · Current Opinion in Psychology
  79. SIX1 cooperates with RUNX1 and SMAD4 in cell fate commitment of Müllerian duct epithelium
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  80. High folic acid intake increases methylation-dependent expression of Lsr and dysregulates hepatic cholesterol homeostasis
    Daniel Leclerc, Jaroslav Jelı́nek, Karen E. Christensen, Jean‐Pierre J. Issa, Rima R. Rozen · 2020 · The Journal of Nutritional Biochemistry
  81. The G Allele of SNP E1/A118G at the µ-Opioid Receptor Gene Locus Shows Genomic Evidence of Recent Positive Selection
    Grace SY Pang, Jingbo Wang, Zihua Wang, Cynthia Ruth Goh, Caroline Guat Lay Lee · 2009 · Pharmacogenomics
  82. SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools
    Arthur Chun-Chieh Shih, DT Lee, Laurent Lin, Chin-Lin Peng, Shiang-Heng Chen, Yu‐Wei Wu, Chun-Yi Wong, Meng-Yuan Chou, Tze-Chang Shiao, Mu-Fen Hsieh · 2006 · BMC Bioinformatics
  83. USING DIRECTED INFORMATION TO BUILD BIOLOGICALLY RELEVANT INFLUENCE NETWORKS
    Arvind U.K. Rao, Alfred O. Hero, David J. States, James Douglas Engel · 2007 · IEEE Computational Systems Bioinformatics Conference (CSB)
  84. Characterization of the human PANK2 promoter
    Brenda J. Polster, Moon Y. Yoon, Susan J. Hayflick · 2010 · Gene
  85. Prediction and characterisation of a highly conserved, remote and cAMP responsive enhancer that regulates Msx1 gene expression in cardiac neural crest and outflow tract
    Kerry Ann Miller, Scott Davidson, Angela Liaros, John Barrow, Marissa Lear, Danielle Heine, Stefan Hoppler, Alasdair MacKenzie · 2008 · Developmental Biology
  86. Gene-based polymorphisms, genomic organization of interferon-β promoter stimulator 1 (IPS-1) gene and association study with the natural resistance to grass carp reovirus in grass carp Ctenopharyngodon idella
    Quanyuan Wan, Jianguo Su, Xiaohui Chen, Chunrong Yang · 2013 · Developmental & Comparative Immunology
  87. Fine-Mapping an Association of FSHR with Preterm Birth in a Finnish Population
    Sung Chun, Jevon Plunkett, Kari Teramo, Louis J. Muglia, Justin C. Fay · 2013 · PLoS ONE
  88. GenProBiS: web server for mapping of sequence variants to protein binding sites
    Janez Konc, Blaž Škrlj, Nika Eržen, Tanja Kunej, Dušanka Janežič · 2017 · Nucleic Acids Research
  89. MyoD1 suppresses cell migration and invasion by inhibiting FUT4 transcription in human gastric cancer cells
    Fei Wu, Yannan Qin, Qiuyu Jiang, Jinyuan Zhang, Fang Li, Qian Li, Xiaofei Wang, Yi Gao, Jiyu Miao, Chen Guo et al. · 2019 · Cancer Gene Therapy
  90. Whole exome sequencing in inborn errors of immunity: use the power but mind the limits
    Giorgia Bucciol, Erika Van Nieuwenhove, Leen Moens, Yuval Itan, Isabelle Meyts · 2017 · Current Opinion in Allergy and Clinical Immunology
  91. Loss of RANBP3L leads to transformation of renal epithelial cells towards a renal clear cell carcinoma like phenotype
    Dmitry Chernyakov, Alexander Groß, Annika Fischer, Nicola Bornkessel, Christoph Schultheiß, Dennis Gerloff, Bayram Edemir · 2021 · Journal of Experimental & Clinical Cancer Research
  92. cneViewer: a database of conserved non-coding elements for studies of tissue-specific gene regulation
    Jason H Persampieri, Deborah Ritter, Daniel Lees, Jessica A. Lehoczky, Qiang Li, Su Guo, Jeffrey H. Chuang · 2008 · Bioinformatics
  93. Clues to function in gene deserts
    James Taylor · 2005 · Trends in biotechnology
  94. ERR2 and ERR3 promote the development of gamma motor neuron functional properties required for proprioceptive movement control
    Mudassar N. Khan, Pitchaiah Cherukuri, Francesco Negro, Ashish Rajput, Piotr Fabrowski, Vikas Bansal, Camille Lancelin, Tsung-I Lee, Yehan Bian, William Paganini Mayer et al. · 2022 · PLoS Biology
  95. Cardiac Expression of ms1/STARS, a Novel Gene Involved in Cardiac Development and Disease, Is Regulated by GATA4
    Samir Ounzain, Satoru Kobayashi, Richard E. Peterson, Aibin He, Anna Motterle, Nilesh J. Samani, Donald R. Menick, William T. Pu, Qiangrong Liang, Nelson W. Chong · 2012 · Molecular and Cellular Biology
  96. CEBPA exerts a specific and biologically important proapoptotic role in pancreatic β cells through its downstream network targets
    Davide Barbagallo, Angelo Giuseppe Condorelli, Salvatore Piro, Nunziatina Laura Parrinello, Tina Fløyel, Marco Ragusa, Agata Maria Rabuazzo, Joachim Størling, Francesco Purrello, Cinzia Di Pietro et al. · 2014 · Molecular Biology of the Cell
  97. Comparative Genomics Identifies the Mouse Bmp3 Promoter and an Upstream Evolutionary Conserved Region (ECR) in Mammals
    Jonathan Wayne Lowery, Anna W. LaVigne, Shoichiro Kokabu, Vicki Rosen · 2013 · PLoS ONE
  98. Meta-coexpression conservation analysis of microarray data: a "subset" approach provides insight into brain-derived neurotrophic factor regulation
    Tamara Aid‐Pavlidis, Pavlos Pavlidis, Tõnis Timmusk · 2009 · BMC Genomics
  99. Differential expression and accumulation of 14-3-3 paralogs in 3T3-L1 preadipocytes and differentiated cells
    Aldana D. Gojanovich, Diego M. Bustos, Marina Uhart · 2016 · Biochemistry and Biophysics Reports
  100. MicroRNA-31 Reduces the Motility of Proinflammatory T Helper 1 Lymphocytes
    Markus Bardua, Claudia Haftmann, Pawel Durek, Kerstin Westendorf, Antje Buttgereit, Cam Loan Tran, Mairi McGrath, Melanie Weber, Katrin Lehmann, Richard Addo et al. · 2018 · Frontiers in Immunology