The DOI matches its Crossref record; 10 of the 10 references it cites were found in a registry or an index.
ProTherm and ProNIT: thermodynamic databases for proteins and protein-nucleic acid interactions
Open accessAbstract
ProTherm and ProNIT are two thermodynamic databases that contain experimentally determined thermodynamic parameters of protein stability and protein-nucleic acid interactions, respectively. The current versions of both the databases have considerably increased the total number of entries and enhanced search interface with added new fields, improved search, display and sorting options. As on September 2005, ProTherm release 5.0 contains 17,113 entries from 771 proteins, retrieved from 1497 scientific articles (approximately 20% increase in data from the previous version). ProNIT release 2.0 contains 4900 entries from 273 research articles, representing 158 proteins. Both databases can be queried using WWW interfaces. Both quick search and advanced search are provided on this web page to facilitate easy retrieval and display of the data from these databases. ProTherm is freely available online at http://gibk26.bse.kyutech.ac.jp/jouhou/Protherm/protherm.html and ProNIT at http://gibk26.bse.kyutech.ac.jp/jouhou/pronit/pronit.html.
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Cites
Berman, H. M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.235 · Cited by 40,196
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
Boeckmann, B. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg095 · Cited by 3,890
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Wu, C. H. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg040 · Cited by 454
ProTherm, version 4.0: thermodynamic database for proteins and mutants
Bava, K. A. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh082 · Cited by 367
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Gromiha, M. M., An, J., Kono, H., Oobatake, M., Uedaira, H., & Sarai, A. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.286 · Cited by 150
Thermodynamic database for protein–nucleic acid interactions (ProNIT)
Prabakaran, P., An, J., Gromiha, M. M., Selvaraj, S., Uedaira, H., Kono, H., & Sarai, A. (2001) · Bioinformatics · doi:10.1093/bioinformatics/17.11.1027 · Cited by 73
ProTherm, Thermodynamic Database for Proteins and Mutants: developments in version 3.0
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Thermodynamic databases for proteins and protein-nucleic acid interactions
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Machine-learning-guided directed evolution for protein engineering
Yang, K. K., Wu, Z., & Arnold, F. H. (2019) · Nature Methods · doi:10.1038/s41592-019-0496-6 · Cited by 1,130
DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability
Rodrigues, C. H., Pires, D. E., & Ascher, D. B. (2018) · Nucleic Acids Research · doi:10.1093/nar/gky300 · Cited by 1,086
mCSM: Predicting the effects of mutations in proteins using graph-based signatures
Pires, D. E. V., Ascher, D. B., & Blundell, T. L. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btt691 · Cited by 1,066
Pires, D. E. V., Ascher, D. B., & Blundell, T. L. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku411 · Cited by 932
Global analysis of protein folding using massively parallel design, synthesis, and testing
Rocklin, G. J., Chidyausiku, T. M., Goreshnik, I., Ford, A., Houliston, S., Lemak, A., Carter, L., Ravichandran, R., Mulligan, V. K., Chevalier, A., et al. (2017) · Science · doi:10.1126/science.aan0693 · Cited by 501
Metadata
- Authors
- Kumar, M. D. S.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2006-01-01
- Volume
- 34
- Issue
- 90001
- Pages
- D204-D206
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2099672241
- Cited by
- 411
- References
- 10
- FWCI
- 7.53
- Type
- journal article
- Language
- en
- Open access
- gold
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