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mVOC 2.0: a database of microbial volatiles
Open accessAbstract
Metabolic capabilities of microorganisms include the production of secondary metabolites (e.g. antibiotics). The analysis of microbial volatile organic compounds (mVOCs) is an emerging research field with huge impact on medical, agricultural and biotechnical applied and basic science. The mVOC database (v1) has grown with microbiome research and integrated species information with data on emitted volatiles. Here, we present the mVOC 2.0 database with about 2000 compounds from almost 1000 species and new features to work with the database. The extended collection of compounds was augmented with data regarding mVOC-mediated effects on plants, fungi, bacteria and (in-)vertebrates. The mVOC database 2.0 now features a mass spectrum finder, which allows a quick mass spectrum comparison for compound identification and the generation of species-specific VOC signatures. Automatic updates, useful links and search for mVOC literature are also included. The mVOC database aggregates and refines available information regarding microbial volatiles, with the ultimate aim to provide a comprehensive and informative platform for scientists working in this research field. To address this need, we maintain a publicly available mVOC database at: http://bioinformatics.charite.de/mvoc.
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PubChem Substance and Compound databases
Kim, S., Thiessen, P. A., Bolton, E. E., Chen, J., Fu, G., Gindulyte, A., Han, L., He, J., He, S., Shoemaker, B. A., et al. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkv951 · Cited by 5,436
Cited by
Beneficial effects of microbial volatile organic compounds (MVOCs) in plants
Poveda, J. (2021) · Applied Soil Ecology · doi:10.1016/j.apsoil.2021.104118 · Cited by 190
VOCs-mediated hormonal signaling and crosstalk with plant growth promoting microbes
Tyagi, S., Mulla, S. I., Lee, K.-J., Chae, J.-C., & Shukla, P. (2018) · Critical Reviews in Biotechnology · doi:10.1080/07388551.2018.1472551 · Cited by 138
Bacterial volatile organic compounds (VOCs) promote growth and induce metabolic changes in rice
Almeida, O. A. C., de Araujo, N. O., Mulato, A. T. N., Persinoti, G. F., Sforça, M. L., Calderan-Rodrigues, M. J., & Oliveira, J. V. D. C. (2023) · Frontiers in Plant Science · doi:10.3389/fpls.2022.1056082 · Cited by 66
Action mechanisms of small microbial volatile compounds in plants
Gámez-Arcas, S., Baroja-Fernández, E., García-Gómez, P., Muñoz, F. J., Almagro, G., Bahaji, A., Sánchez-López, Á. M., & Pozueta-Romero, J. (2022) · Journal of Experimental Botany · doi:10.1093/jxb/erab463 · Cited by 33
Niu, J., Li, X., Zhang, S., Yao, Y., Zhang, Y., Liu, Y., Peng, X., Huang, J., & Peng, F. (2023) · Frontiers in Plant Science · doi:10.3389/fpls.2022.941929 · Cited by 17
Metadata
- Authors
- Lemfack, M. C., Gohlke, B.-O., Toguem, S. M. T., Preissner, S., Piechulla, B., & Preissner, R.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2017-11-02
- Volume
- 46
- Issue
- D1
- Pages
- D1261-D1265
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W4233224392
- Cited by
- 403
- References
- 1
- FWCI
- 17.66
- Type
- journal article
- Language
- en
- Open access
- gold
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- Lemfack, M. C., Gohlke, B.-O., Toguem, S. M. T., Preissner, S., Piechulla, B., & Preissner, R. (2018). mVOC 2.0: a database of microbial volatiles. Nucleic Acids Research. https://doi.org/10.1093/nar/gkx1016
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