Cited by 601Anaerobic Digestion and Biogas ProductionGut microbiota and healthMicrobial Fuel Cells and Bioremediation

The DOI matches its Crossref record; 31 of the 32 references it cites were found in a registry or an index.

Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces

Dridi, Bédis, Fardeau, Marie-Laure, Ollivier, Bernard, Raoult, Didier, Drancourt, Michel·2012·International Journal of Systematic and Evolutionary Microbiology

DOI 10.1099/ijs.0.033712-0

Open this paper in CoChat — free account

Abstract

During attempts to obtain novel, human-associated species of the domain Archaea , a coccoid micro-organism, designated strain B10 T , was isolated in pure culture from a sample of human faeces collected in Marseille, France. On the basis of its phenotypic characteristics and 16S rRNA and mcr A gene sequences, the novel strain was classified as a methanogenic archaeon. Cells of the strain were non-motile, Gram-staining-positive cocci that were approximately 850 nm in diameter and showed autofluorescence at 420 nm. Cells were lysed by 0.1 % (w/v) SDS. With hydrogen as the electron donor, strain B10 T produced methane by reducing methanol. The novel strain was unable to produce methane when hydrogen or methanol was the sole energy source. In an atmosphere containing CO 2 , strain B10 T could not produce methane from formate, acetate, trimethylamine, 2-butanol, 2-propanol, cyclopentanol, 2-pentanol, ethanol, 1-propanol or 2,3-butanediol. Strain B10 T grew optimally with 0.5–1.0 % (w/v) NaCl, at pH 7.6 and at 37 °C. It required tungstate-selenite for growth. The complete genome of the novel strain was sequenced; the size of the genome was estimated to be 2.05 Mb and the genomic DNA G+C content was 59.93 mol%. In phylogenetic analyses based on 16S rRNA gene sequences, the highest sequence similarities (98.0–98.7 %) were seen between strain B10 T and several uncultured, methanogenic Archaea that had been collected from the digestive tracts of a cockroach, a chicken and mammals. In the same analysis, the non-methanogenic ‘ Candidatus Aciduliprofundum boonei’ DSM 19572 was identified as the cultured micro-organism that was most closely related to strain B10 T (83.0 % 16S rRNA gene sequence similarity). Each of the three treeing algorithms used in the analysis of 16S rRNA gene sequences indicated that strain B10 T belongs to a novel order that is distinct from the Thermoplasmatales . The novel strain also appeared to be distinct from Methanosphaera stadtmanae DSM 3091 T (72.9 % 16S rRNA gene sequence similarity), another methanogenic archaeon that was isolated from human faeces and can use methanol in the presence of hydrogen. Based on the genetic and phenotypic evidence, strain B10 T represents a novel species of a new genus for which the name Methanomassiliicoccus luminyensis gen. nov., sp. nov. is proposed. The type strain of the type species is B10 T ( = DSM 24529 T = CSUR P135 T ).

Integrity signals

Registry

Crossref · 10.1099/ijs.0.033712-0

Cites

31 of 31 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

16S ribosomal DNA amplification for phylogenetic study
Weisburg, W. G., Barns, S. M., Pelletier, D. A., & Lane, D. J. (1991) · Journal of Bacteriology · doi:10.1128/jb.173.2.697-703.1991 · Cited by 11,970
Genome sequencing in microfabricated high-density picolitre reactors
Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y.-J., Chen, Z., et al. (2005) · Nature · doi:10.1038/nature03959 · Cited by 7,693
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
Kumar, S., Nei, M., Dudley, J. T., & Tamura, K. (2008) · Briefings in Bioinformatics · doi:10.1093/bib/bbn017 · Cited by 3,511
Methanogens: reevaluation of a unique biological group
Balch, W. E., Fox, G. E., Magrum, L. J., Woese, C. R., & WOLFE, R. S. (1979) · Microbiological Reviews · doi:10.1128/mr.43.2.260-296.1979 · Cited by 2,918
The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill b bThe GenBank accession numbers for the mcrA sequences reported in this paper are AF414034–AF414051 (see Fig. 2) and AF414007–AF414033 (environmental isolates in Fig. 3).
Luton, P. E., Wayne, J. M., Sharp, R. J., & Riley, P. W. (2002) · Microbiology · doi:10.1099/00221287-148-11-3521 · Cited by 875
Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut
Samuel, B. S., Hansen, E. E., Manchester, J. K., Coutinho, P. M., Henrissat, B., Fulton, R., Latreille, P., Kim, K., Wilson, R. K., & Gordon, J. I. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704189104 · Cited by 549
High Prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae Detected in the Human Gut Using an Improved DNA Detection Protocol
Dridi, B., Henry, M., Khéchine, A. E., Raoult, D., & Drancourt, M. (2009) · PLoS ONE · doi:10.1371/journal.pone.0007063 · Cited by 401
Self-citation
Identification of Methyl Coenzyme M Reductase A ( mcrA ) Genes Associated with Methane-Oxidizing Archaea
Hallam, S., Girguis, P. R., Preston, C. M., Richardson, P. M., & DeLong, E. F. (2003) · Applied and Environmental Microbiology · doi:10.1128/aem.69.9.5483-5491.2003 · Cited by 385
Methanosphaera stadtmaniae gen. nov., sp. nov.: a species that forms methane by reducing methanol with hydrogen
Miller, T. L., & Wolin, M. J. (1985) · Archives of Microbiology · doi:10.1007/bf00423270 · Cited by 362
Isolation of Methanobrevibacter smithii from human feces
Miller, T. L., Wolin, M. J., de Macario, E. C., & Macario, A. J. L. (1982) · Applied and Environmental Microbiology · doi:10.1128/aem.43.1.227-232.1982 · Cited by 287

Flagged first, then by citations

Show all 32 references

1 of the 32 references couldn’t be matched to a known paper.

Sorted by citations

Items 101–200 of 601

Microbial vanadate and nitrate reductions coupled with anaerobic methane oxidation in groundwater
Zhang, B., Jiang, Y., Zuo, K., He, C., Dai, Y., & Ren, Z. J. (2019) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2019.121228 · Cited by 89
Increases in temperature and nutrient availability positively affect methane‐cycling microorganisms in Arctic thermokarst lake sediments
de Jong, A. E. E., Zandt, M. H. I. ‘., Meisel, O. H., Jetten, M. S. M., Dean, J. F., Rasigraf, O., & Welte, C. U. (2018) · Environmental Microbiology · doi:10.1111/1462-2920.14345 · Cited by 88
The effect of temperature on the microbial communities of peak biogas production in batch biogas reactors
Tian, G., Yang, B., Dong, M., Zhu, R., Yin, F., Zhao, X., Wang, Y., Xiao, W., Wang, Q., Zhang, W., et al. (2018) · Renewable Energy · doi:10.1016/j.renene.2018.01.119 · Cited by 88
Methanonatronarchaeum thermophilum gen. nov., sp. nov. and 'Candidatus Methanohalarchaeum thermophilum', extremely halo(natrono)philic methyl-reducing methanogens from hypersaline lakes comprising a new euryarchaeal class Methanonatronarchaeia classis nov.
Sorokin, D. Y., Merkel, A. Y., Abbas, B. A., Makarova, K. S., Rijpstra, W. I. C., Koenen, M., Damsté, J. S. S., Galinski, E. A., Koonin, E. V., & van Loosdrecht, M. C. M. (2018) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijsem.0.002810 · Cited by 87
Symbiosis of sulfate-reducing bacteria and methanogenic archaea in sewer systems
Shi, X., Gao, G., Tian, J., Wang, X. C., Jin, X., & Jin, P. K. (2020) · Environment International · doi:10.1016/j.envint.2020.105923 · Cited by 87
Isolation of a methyl-reducing methanogen outside the Euryarchaeota
Wu, K., Zhou, L., Tahon, G., Liu, L., Jiang, L., Zhang, J., Zheng, F., Deng, C., Han, W., Bai, L., et al. (2024) · Nature · doi:10.1038/s41586-024-07728-y · Cited by 83
Methanomethylophilus alvus Mx1201 Provides Basis for Mutual Orthogonal Pyrrolysyl tRNA/Aminoacyl-tRNA Synthetase Pairs in Mammalian Cells
Meineke, B., Heimgärtner, J., Lafranchi, L., & Elsässer, S. J. (2018) · ACS Chemical Biology · doi:10.1021/acschembio.8b00571 · Cited by 85
Enhancing Anaerobic Digestion of Pharmaceutical Industries Wastewater with the Composite Addition of Zero Valent Iron (ZVI) and Granular Activated Carbon (GAC)
Dai, C., Yang, L., Wang, J., Li, D., Zhang, Y., & Zhou, X. (2021) · Bioresource Technology · doi:10.1016/j.biortech.2021.126566 · Cited by 85
A gradual change between methanogenesis and sulfidogenesis during a long-term UASB treatment of sulfate-rich chemical wastewater
Wu, J., Niu, Q., Li, L., Hu, Y. Q., Mribet, C., Hojo, T., & Li, Y.-Y. (2018) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2018.04.172 · Cited by 83
Methanogenic archaea in subgingival sites: a review
Nguyen‐Hieu, T., Khelaifia, S., Aboudharam, G., & Drancourt, M. (2012) · Apmis · doi:10.1111/apm.12015 · Cited by 83
Self-citation
Effects of ferric oxide on the microbial community and functioning during anaerobic digestion of swine manure
Lu, T., Zhang, J., Wei, Y., & Shen, P. (2019) · Bioresource Technology · doi:10.1016/j.biortech.2019.121393 · Cited by 82
Methanogenic community changes, and emissions of methane and other gases, during storage of acidified and untreated pig slurry
Petersen, S. O., Højberg, O., Poulsen, M., Schwab, C., & Eriksen, J. (2014) · Journal of Applied Microbiology · doi:10.1111/jam.12498 · Cited by 81
Age‐related prevalence of M ethanomassiliicoccus luminyensis in the human gut microbiome
Dridi, B., Henry, M., Richet, H., Raoult, D., & Drancourt, M. (2012) · Apmis · doi:10.1111/j.1600-0463.2012.02899.x · Cited by 86
Self-citation
Response of a continuous anaerobic digester to temperature transitions: A critical range for restructuring the microbial community structure and function
Kim, J., & Lee, C. (2015) · Water Research · doi:10.1016/j.watres.2015.11.060 · Cited by 81
Gut Colonization by Methanogenic Archaea Is Associated with Organic Dairy Consumption in Children
van de Pol, J. A. A., van Best, N., Mbakwa, C. A., Thijs, C. T., Savelkoul, P. H. M., Arts, I. C. W., Hornef, M. W., Mommers, M., & Penders, J. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.00355 · Cited by 82
Characterization of microbial community and main functional groups of prokaryotes in thermophilic anaerobic co-digestion of food waste and paper waste
Li, L., Qin, Y., Kong, Z., Wu, J., Kubota, K., & Li, Y.-Y. (2018) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2018.10.292 · Cited by 81
Disentangling Microbial Syntrophic Mechanisms for Hexavalent Chromium Reduction in Autotrophic Biosystems
Zhang, B., Liu, J., Sheng, Y., Shi, J., & Dong, H. (2021) · Environmental Science & Technology · doi:10.1021/acs.est.1c00383 · Cited by 79
Diversity of Methane-Cycling Archaea in Hydrothermal Sediment Investigated by General and Group-Specific PCR Primers
Lever, M. A., & Teske, A. (2014) · Applied and Environmental Microbiology · doi:10.1128/aem.03588-14 · Cited by 80
Methane formation and oxidation by prokaryotes
Kallistova, A. Y., Merkel, A. Y., Tarnovetskii, I. Y., & Пименов, Н. В. (2017) · Microbiology · doi:10.1134/s0026261717060091 · Cited by 80
Ecology and characteristics of methanogenic archaea in animals and humans
Saengkerdsub, S., & Ricke, S. C. (2013) · Critical Reviews in Microbiology · doi:10.3109/1040841x.2013.763220 · Cited by 82
Methanogenic archaea in peatlands
Bräuer, S. L., Basiliko, N., Siljanen, H. M. P., & Zinder, S. H. (2020) · FEMS Microbiology Letters · doi:10.1093/femsle/fnaa172 · Cited by 78
Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette
Borrel, G., Gaci, N., Peyret, P., O’Toole, P. W., Gribaldo, S., & Brugère, J. (2014) · Archaea · doi:10.1155/2014/374146 · Cited by 78
Evolution of Microbial “Streamer” Growths in an Acidic, Metal-Contaminated Stream Draining an Abandoned Underground Copper Mine
Kay, C. M., Rowe, O. F., Rocchetti, L., Coupland, K., Hallberg, K. B., & Johnson, D. B. (2013) · Life · doi:10.3390/life3010189 · Cited by 77
Culture of Methanogenic Archaea from Human Colostrum and Milk
Togo, A. H., Grine, G., Khelaifia, S., Robert, C. D., Brevaut‐Malaty, V., Caputo, A., Baptiste, E., Bonnet, M., Levasseur, A., Drancourt, M., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-54759-x · Cited by 81
Self-citation
Complete Genome Sequence of Methanomassiliicoccus luminyensis, the Largest Genome of a Human-Associated Archaea Species
Gorlas, A., Robert, C., Gimenez, G., Drancourt, M., & Raoult, D. (2012) · Journal of Bacteriology · doi:10.1128/jb.00956-12 · Cited by 75
Self-citation
Metabolic Adaptation of Methanogens in Anaerobic Digesters Upon Trace Element Limitation
Wintsche, B., Jehmlich, N., Popp, D., Harms, H., & Kleinsteuber, S. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.00405 · Cited by 75
Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis
Kletzin, A., eHeimerl, T., Flechsler, J., van Niftrik, L., Rachel, R., & Klingl, A. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.00439 · Cited by 75
Microbial trophic interactions and mcrA gene expression in monitoring of anaerobic digesters
Alvarado, A., Hernández, L. E. M., Palacio-Molina, S. L., Oropeza-Navarro, R., Luévanos‐Escareño, M. P., & Balagurusamy, N. (2014) · Frontiers in Microbiology · doi:10.3389/fmicb.2014.00597 · Cited by 75
Methanobrevibacter smithii, a methanogen consistently colonising the newborn stomach
Grine, G., Boualam, M. A., & Drancourt, M. (2017) · European Journal of Clinical Microbiology & Infectious Diseases · doi:10.1007/s10096-017-3084-7 · Cited by 74
Self-citation
Influences of eutrophication on methanogenesis pathways and methanogenic microbial community structures in freshwater lakes
Yang, Y., Chen, J., Tong, T., Xie, S., & Liu, Y. (2020) · Environmental Pollution · doi:10.1016/j.envpol.2020.114106 · Cited by 73
Instability diagnosis and syntrophic acetate oxidation during thermophilic digestion of vegetable waste
Li, D., Yi, R., Chen, L., Cao, Q., Li, Z., & Liu, X. (2018) · Water Research · doi:10.1016/j.watres.2018.04.019 · Cited by 73
The human archaeome: methodological pitfalls and knowledge gaps
Mahnert, A., Blohs, M., Pausan, M.-R., & Moissl‐Eichinger, C. (2018) · Emerging Topics in Life Sciences · doi:10.1042/etls20180037 · Cited by 69
Effects of biochar on methane emission from paddy soil: Focusing on DOM and microbial communities
Ji, M., Zhou, L., Zhang, S., Luo, G., & Sang, W. (2020) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2020.140725 · Cited by 71
Anaerobic methanotrophic communities thrive in deep submarine permafrost
Winkel, M., Mitzscherling, J., Overduin, P. P., Horn, F., Winterfeld, M., Rijkers, R., Grigoriev, M. N., Knoblauch, C., Mangelsdorf, K., Wagner, D., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-19505-9 · Cited by 72
Changes in rumen bacterial and archaeal communities over the transition period in primiparous Holstein dairy cows
Zhu, Z., Kristensen, L., Difford, G. F., Poulsen, M., Noel, S. J., Al‐Soud, W. A., Sørensen, S. J., Lassen, J., Løvendahl, P., & Højberg, O. (2018) · Journal of Dairy Science · doi:10.3168/jds.2017-14366 · Cited by 75
Effects of various materials used to promote the direct interspecies electron transfer on anaerobic digestion of low-concentration swine manure
Zhuravleva, E. A., Shekhurdina, S. V., Kotova, I., Лойко, Н. Г., Popova, N., Kryukov, E., Kovalev, А. A., Kovalev, D. A., & Litti, Y. (2022) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2022.156073 · Cited by 69
Community Composition of Known and Uncultured Archaeal Lineages in Anaerobic or Anoxic Wastewater Treatment Sludge
Kuroda, K., Hatamoto, M., Nakahara, N., Abe, K., Takahashi, M., Araki, N., & Yamaguchi, T. (2014) · Microbial Ecology · doi:10.1007/s00248-014-0525-z · Cited by 71
Archaeal Biofilms: The Great Unexplored
Orell, A., Fröls, S., & Albers, S. (2013) · Annual Review of Microbiology · doi:10.1146/annurev-micro-092412-155616 · Cited by 73
Response of morphology and microbial community structure of granules to influent COD/SO42 – ratios in an upflow anaerobic sludge blanket (UASB) reactor treating starch wastewater
Lü, X., Ni, J., Zhen, G., Kubota, K., & Li, Y. (2018) · Bioresource Technology · doi:10.1016/j.biortech.2018.02.055 · Cited by 70
Beyond butyrate: microbial fiber metabolism supporting colonic epithelial homeostasis
Fagundes, R. R., Belt, S. C., Bakker, B. M., Dijkstra, G. D. H., Harmsen, H. J. M., & Faber, K. N. (2023) · Trends in Microbiology · doi:10.1016/j.tim.2023.07.014 · Cited by 74
S-layer and cytoplasmic membrane – exceptions from the typical archaeal cell wall with a focus on double membranes
Klingl, A. (2014) · Frontiers in Microbiology · doi:10.3389/fmicb.2014.00624 · Cited by 70
Change to biogas production in solid-state anaerobic digestion using rice straw as substrates at different temperatures
Liu, Y., Fang, J., Tong, X., Huan, C., Ji, G., Zeng, Y., Xu, L., & Yan, Z. (2019) · Bioresource Technology · doi:10.1016/j.biortech.2019.122066 · Cited by 70
Archaeal and bacterial diversity in two hot spring microbial mats from a geothermal region in Romania
Coman, C., Drugă, B., Hegedűs, A., Sicora, C., & Dragoş, N. (2013) · Extremophiles · doi:10.1007/s00792-013-0537-5 · Cited by 72
Microbial fingerprints of methanation in a hybrid electric-biological anaerobic digestion
Wang, B., Liu, W., Liang, B., Jiang, J., & Wang, A. (2022) · Water Research · doi:10.1016/j.watres.2022.119270 · Cited by 70
Few Highly Abundant Operational Taxonomic Units Dominate within Rumen Methanogenic Archaeal Species in New Zealand Sheep and Cattle
Seedorf, H., Kittelmann, S., & Janssen, P. H. (2014) · Applied and Environmental Microbiology · doi:10.1128/aem.03018-14 · Cited by 73
The role of gut microbiota in fetal methylmercury exposure: Insights from a pilot study
Rothenberg, S. E., Keiser, S., Ajami, N. J., Wong, M. C., Gesell, J. R., Petrosino, J. F., & Johs, A. (2015) · Toxicology Letters · doi:10.1016/j.toxlet.2015.11.022 · Cited by 69
Growth Characteristics ofMethanomassiliicoccus luminyensisand Expression of Methyltransferase Encoding Genes
Kröninger, L., Gottschling, J., & Deppenmeier, U. (2017) · Archaea · doi:10.1155/2017/2756573 · Cited by 69
Gut colonization with methanobrevibacter smithii is associated with childhood weight development
Mbakwa, C. A., Penders, J., Savelkoul, P. H. M., Thijs, C. T., Dagnelie, P. C., Mommers, M., & Arts, I. C. W. (2015) · Obesity · doi:10.1002/oby.21266 · Cited by 72
Performance and microbial community of an expanded granular sludge bed reactor in the treatment of cephalosporin wastewater
Li, Z., Hu, Y., Liu, C., Shen, J., Wu, J., Li, H., Wang, K., & Zuo, J. (2018) · Bioresource Technology · doi:10.1016/j.biortech.2018.12.003 · Cited by 68
Hydrogenotrophic Methanogenesis Under Alkaline Conditions
Wormald, R. M., Rout, S. P., Mayes, W. M., Gomes, H. I., & Humphreys, P. N. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.614227 · Cited by 67
Clinical significance and potential role of trimethylamine N-oxide in neurological and neuropsychiatric disorders
Mudimela, S., Vishwanath, N. K., Pillai, A., Morales, R., Marrelli, S. P., Barichello, T., & Giridharan, V. V. (2022) · Drug Discovery Today · doi:10.1016/j.drudis.2022.08.002 · Cited by 71
Evolving understanding of rumen methanogen ecophysiology
Khairunisa, B. H., Heryakusuma, C., Ike, K. A., Mukhopadhyay, B., & Susanti, D. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1296008 · Cited by 78
Physicochemical conditions, metabolites and community structure of the bacterial microbiota in the gut of wood-feeding cockroaches (Blaberidae: Panesthiinae)
Bauer, E., Lampert, N., Mikaelyan, A., Köhler, T., Maekawa, K., & Brune, A. (2014) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiu028 · Cited by 67
Versatile cell surface structures of archaea
Chaudhury, P., Quax, T. E. F., & Albers, S. (2017) · Molecular Microbiology · doi:10.1111/mmi.13889 · Cited by 67
Performance and genome-centric metagenomics of thermophilic single and two-stage anaerobic digesters treating cheese wastes
Fontana, A., Campanaro, S., Treu, L., Kougias, P., Cappa, F., Morelli, L., & Angelidaki, İ. (2018) · Water Research · doi:10.1016/j.watres.2018.02.001 · Cited by 70
Methanogen communities in stools of humans of different age and health status and co-occurrence with bacteria
Vanderhaeghen, S., Lacroix, C., & Schwab, C. (2015) · FEMS Microbiology Letters · doi:10.1093/femsle/fnv092 · Cited by 69
Pyrosequencing reveals microbial community profile in anaerobic bio-entrapped membrane reactor for pharmaceutical wastewater treatment
Ng, K. K., Shi, X., Ong, S. L., & Ng, H. Y. (2015) · Bioresource Technology · doi:10.1016/j.biortech.2015.10.100 · Cited by 66
Comparison of anaerobic digestion strategies of nitrogen-rich substrates: Performance of anaerobic reactors and microbial community diversity
Ziganshina, E. E., Ibragimov, E. M., Vankov, P. Y., Miluykov, V. A., & Ziganshin, A. M. (2016) · Waste Management · doi:10.1016/j.wasman.2016.10.038 · Cited by 65
Continuous n-valerate formation from propionate and methanol in an anaerobic chain elongation open-culture bioreactor
de Smit, S. M., de Leeuw, K. D., Buisman, C. J. N., & Strik, D. P. B. T. B. (2019) · Biotechnology for Biofuels · doi:10.1186/s13068-019-1468-x · Cited by 65
Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence
Lambrecht, J., Cichocki, N., Hübschmann, T., Koch, C., Harms, H., & Müller, S. (2017) · Microbial Cell Factories · doi:10.1186/s12934-017-0793-7 · Cited by 64
Study of an enhanced dry anaerobic digestion of swine manure: Performance and microbial community property
Hu, Y., Wu, J., Li, H., Poncin, S., Wang, K., & Zuo, J. (2019) · Bioresource Technology · doi:10.1016/j.biortech.2019.03.014 · Cited by 64
Bacteria and Methanogens in the Human Microbiome: a Review of Syntrophic Interactions
Djemai, K., Drancourt, M., & Alou, M. T. (2021) · Microbial Ecology · doi:10.1007/s00248-021-01796-7 · Cited by 64
Self-citation
Microbial activity response to hydrogen injection in thermophilic anaerobic digesters revealed by genome-centric metatranscriptomics
Fontana, A., Kougias, P., Treu, L., Kovalovszki, A., Valle, G., Cappa, F., Morelli, L., Angelidaki, İ., & Campanaro, S. (2018) · Microbiome · doi:10.1186/s40168-018-0583-4 · Cited by 63
Symbiotic Bacteroides and Clostridium-rich methanogenic consortium enhanced biogas production of high-solid anaerobic digestion systems
Tukanghan, W., Hupfauf, S., Gómez‐Brandón, M., Insam, H., Salvenmoser, W., Prasertsan, P., Cheirsilp, B., & O‐Thong, S. (2021) · Bioresource Technology Reports · doi:10.1016/j.biteb.2021.100685 · Cited by 62
Methanomethylovorans uponensis sp. nov., a methylotrophic methanogen isolated from wetland sediment
Cha, I., Min, U.-G., Kim, S., Yim, K. J., Roh, S. W., & Rhee, S. (2013) · Antonie van Leeuwenhoek · doi:10.1007/s10482-013-0020-4 · Cited by 62
Geomicrobiology and Metagenomics of Terrestrial Deep Subsurface Microbiomes
Itävaara, M., Salavirta, H., Marjamaa, K., & Ruskeeniemi, T. (2016) · Advances in applied microbiology · doi:10.1016/bs.aambs.2015.12.001 · Cited by 60
The hunt for the most-wanted chemolithoautotrophic spookmicrobes
Zandt, M. H. I. ‘., de Jong, A. E. E., Slomp, C. P., & Jetten, M. S. M. (2018) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiy064 · Cited by 63
Long-term evaluation of methane production in a bio-electrochemical anaerobic digestion reactor according to the organic loading rate
Park, J., Lee, B., Park, H.-R., & Jun, H. (2018) · Bioresource Technology · doi:10.1016/j.biortech.2018.11.021 · Cited by 61
Jointly reducing antibiotic resistance genes and improving methane yield in anaerobic digestion of chicken manure by feedstock microwave pretreatment and activated carbon supplementation
Zhang, L., Loh, K., & Zhang, J. (2019) · Chemical Engineering Journal · doi:10.1016/j.cej.2019.04.207 · Cited by 62
Microbiota Effect on Trimethylamine N-Oxide Production: From Cancer to Fitness—A Practical Preventing Recommendation and Therapies
Tacconi, E., Palma, G., Biase, D. D., Luciano, A., Barbieri, M., de Nigris, F., & Bruzzese, F. (2023) · Nutrients · doi:10.3390/nu15030563 · Cited by 62
Metagenomic analysis of methanogen populations in three full-scale mesophilic anaerobic manure digesters operated on dairy farms in Vermont, USA
St‐Pierre, B., & Wright, A. G. (2013) · Bioresource Technology · doi:10.1016/j.biortech.2013.03.188 · Cited by 63
Evidence for the involvement of two heterodisulfide reductases in the energy‐conserving system of Methanomassiliicoccus luminyensis
Kröninger, L., Berger, S., Welte, C. U., & Deppenmeier, U. (2015) · FEBS Journal · doi:10.1111/febs.13594 · Cited by 60
Hydrogenotrophic Methanogenesis and Autotrophic Growth of Methanosarcina thermophila
Lackner, N., Hintersonnleitner, A., Wagner, A. O., & Illmer, P. (2018) · Archaea · doi:10.1155/2018/4712608 · Cited by 62
Methanogens at the top of the world: occurrence and potential activity of methanogens in newly deglaciated soils in high-altitude cold deserts in the Western Himalayas
Aschenbach, K., Conrad, R., Řeháková, K., Doležal, J., Janatková, K., & Angel, R. (2013) · Frontiers in Microbiology · doi:10.3389/fmicb.2013.00359 · Cited by 59
New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic Environments
Cozannet, M., Borrel, G., Roussel, E. G., Moalic, Y., Allioux, M., Amandine, S., Toffin, L. M. A. A., & Alain, K. (2020) · Microorganisms · doi:10.3390/microorganisms9010030 · Cited by 56
What's in a Name? New Bacterial Species and Changes to Taxonomic Status from 2012 through 2015
Munson, E. L., & Carroll, K. C. (2016) · Journal of Clinical Microbiology · doi:10.1128/jcm.01379-16 · Cited by 58
Enhanced methane production and energy potential from rice straw by employing microaerobic pretreatment via anaerobic digestion
Amin, F. R., Khalid, H., Li, W., Chen, C., & Liu, G. (2021) · Journal of Cleaner Production · doi:10.1016/j.jclepro.2021.126434 · Cited by 58
Effect of temperature on the microbial community responsible for methane production in alkaline NamCo wetland soil
Deng, Y., Liu, P., & Conrad, R. (2019) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2019.01.024 · Cited by 58
Metabolic potential of microbial communities from ferruginous sediments
Vuillemin, A., Horn, F., Friese, A., Winkel, M., Alawi, M., Wagner, D., Henny, C., Orsi, W. D., Crowe, S. A., & Kallmeyer, J. (2018) · Environmental Microbiology · doi:10.1111/1462-2920.14343 · Cited by 56
Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration
Denonfoux, J., Parisot, N., Dugat‐Bony, É., Biderre‐Petit, C., Boucher, D., Morgavi, D. P., Paslier, D. L., Peyretaillade, É., & Peyret, P. (2013) · DNA Research · doi:10.1093/dnares/dst001 · Cited by 55
Performance and microbial community variations of anaerobic digesters under increasing tetracycline concentrations
Xiong, Y., Harb, M., & Hong, P. (2017) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-017-8253-1 · Cited by 54
The Microbial Ecosystem Distinguishes Chronically Diseased Tissue from Adjacent Tissue in the Sigmoid Colon of Chronic, Recurrent Diverticulitis Patients
Schieffer, K. M., Sabey, K. A., Wright, J., Toole, D. R., Drucker, R., Tokarev, V., Harris, L., Deiling, S. M., Eshelman, M. A., Hegarty, J. P., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-06787-8 · Cited by 54
Microbial community composition and functional potential in Bothnian Sea sediments is linked to Fe and S dynamics and the quality of organic matter
Rasigraf, O., van Helmond, N. A. G. M., Frank, J., Lenstra, W. K., Egger, M., Slomp, C. P., & Jetten, M. S. M. (2019) · Limnology and Oceanography · doi:10.1002/lno.11371 · Cited by 53
Recent advances in microbial mercury methylation: A review on methylation habitat, methylator, mechanism, and influencing factor
Luo, H., Cheng, Q., He, D., Sun, J., Li, J., & Pan, X. (2022) · Process Safety and Environmental Protection · doi:10.1016/j.psep.2022.12.007 · Cited by 53
Diversity of methanogens and sulfate-reducing bacteria in the interfaces of five deep-sea anoxic brines of the Red Sea
Guan, Y., Hikmawan, T., Antunes, A., Ngugi, D. K., & Stingl, U. (2015) · Research in Microbiology · doi:10.1016/j.resmic.2015.07.002 · Cited by 53
Magnet anode enhances extracellular electron transfer and enrichment of exoelectrogenic bacteria in bioelectrochemical systems
Zhou, H., Mei, X., Liu, B.-F., Xie, G.-J., & Xing, D. (2019) · Biotechnology for Biofuels · doi:10.1186/s13068-019-1477-9 · Cited by 52
Enhanced performance of anaerobic digestion of cephalosporin C fermentation residues by gamma irradiation-induced pretreatment
Hu, Y., Wang, J., & Shen, Y. (2019) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2019.121335 · Cited by 52
Methylotrophic methanogens and bacteria synergistically demethylate dimethylarsenate in paddy soil and alleviate rice straighthead disease
Chen, C., Li, L., Wang, Y., Dong, X., & Zhao, F. J. (2023) · The ISME Journal · doi:10.1038/s41396-023-01498-7 · Cited by 50
TRUC or the Need for a New Microbial Classification
Raoult, D. (2013) · Intervirology · doi:10.1159/000354269 · Cited by 51
Self-citation
Effects of pig slurry acidification on methane emissions during storage and subsequent biogas production
Shin, S.-R., Im, S., Mostafa, A., Lee, M., Yun, Y., Oh, S.-E., & Kim, D.-H. (2019) · Water Research · doi:10.1016/j.watres.2019.01.005 · Cited by 51
Different Interspecies Electron Transfer Patterns during Mesophilic and Thermophilic Syntrophic Propionate Degradation in Chemostats
Chen, Y.-T., Zeng, Y., Wang, H., Zheng, D., Kamagata, Y., Narihiro, T., Nobu, M. K., & Tang, Y. (2020) · Microbial Ecology · doi:10.1007/s00248-020-01485-x · Cited by 52
Biological Aspects, Advancements and Techno-Economical Evaluation of Biological Methanation for the Recycling and Valorization of CO2
Bellini, R., Bassani, I., Vizzarro, A., Azim, A. A., Vasile, N., Pirri, C. F., Verga, F., & Menin, B. (2022) · Energies · doi:10.3390/en15114064 · Cited by 50
Expanding the phylogenetic distribution of cytochrome b -containing methanogenic archaea sheds light on the evolution of methanogenesis
Ou, Y.-F., Dong, H., McIlroy, S. J., Crowe, S. A., Hallam, S., Han, P., Kallmeyer, J., Simister, R. L., Vuillemin, A., Leu, A. O., et al. (2022) · The ISME Journal · doi:10.1038/s41396-022-01281-0 · Cited by 50
Archaeal Lineages within the Human Microbiome: Absent, Rare or Elusive?
Horz, H. (2015) · Life · doi:10.3390/life5021333 · Cited by 53
The complete genome sequence of the methanogenic archaeon ISO4-H5 provides insights into the methylotrophic lifestyle of a ruminal representative of the Methanomassiliicoccales
Li, Y., Leahy, S. C., Jeyanathan, J., Henderson, G., Cox, F., Altermann, E., Kelly, W. J., Lambie, S. C., Janssen, P. H., Rakonjac, J., et al. (2016) · Standards in Genomic Sciences · doi:10.1186/s40793-016-0183-5 · Cited by 47
Enhanced anaerobic digestion of glycerol by promoting DIET reaction
Im, S., Yun, Y., Song, Y., & Kim, D. (2018) · Biochemical Engineering Journal · doi:10.1016/j.bej.2018.11.006 · Cited by 49
The metabolic performance and microbial communities of anaerobic digestion of chicken manure under stressed ammonia condition: A case study of a 10-year successful biogas plant
Bi, S., Westerholm, M., Hu, W., Mahdy, A., Dong, T., Sun, Y., Qiao, W., & Dong‬, R. (2020) · Renewable Energy · doi:10.1016/j.renene.2020.11.133 · Cited by 48
Synergetic effects of anaerobic co-digestion of food waste and algae on biogas production
Khanthong, K., Kadam, R., Kim, T., & Park, J. (2023) · Bioresource Technology · doi:10.1016/j.biortech.2023.129208 · Cited by 48
Emerging investigator series: inhibition and recovery of anaerobic granular sludge performance in response to short-term polystyrene nanoparticle exposure
Feng, Y., Feng, L., Liu, S.-C., Duan, J.-L., Zhang, Y., Li, S., Sun, X., Wang, S., & Yuan, X.-Z. (2018) · Environmental Science Water Research & Technology · doi:10.1039/c8ew00535d · Cited by 50
Diversity, metabolism and cultivation of archaea in mangrove ecosystems
Zhang, C., Chen, Y., Sun, Y., Pan, J., Cai, M., & Li, M. (2020) · Marine Life Science & Technology · doi:10.1007/s42995-020-00081-9 · Cited by 47

Authors: Dridi, B., Fardeau, M.-L., Ollivier, B., Raoult, D., & Drancourt, M.
Affiliations: Centre National de la Recherche Scientifique (FR)
Aix-Marseille Université (FR)
ORCID: Fardeau, Marie-Laure
Ollivier, Bernard
Raoult, Didier
Drancourt, Michel
Venue: International Journal of Systematic and Evolutionary Microbiology
Publisher: Microbiology Society
Published: 2012-08-01
Volume: 62
Issue: Pt_8
Pages: 1902-1907
ISSN: 1466-5026 (ISSN-L)
1466-5034
DOI: 10.1099/ijs.0.033712-0
OpenAlex: W2076631370
Cited by: 596
References: 32
Citations by year: 2026: 14 · 2025: 19 · 2024: 36 · 2023: 38 · 2022: 40 · 2021: 49 · 2020: 61 · 2019: 63 · 2018: 66 · 2017: 42 · 2016: 45 · 2015: 53 · 2014: 28 · 2013: 31 · 2012: 11
FWCI: 76.70
Type: journal article
Language: en
Open access: closed
Locations: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (publishedVersion)
PubMed (publishedVersion)
HAL (submittedVersion)
Funders: Aix-Marseille Université
Topics: Physical Sciences › Energy › Renewable Energy, Sustainability and the Environment › Anaerobic Digestion and Biogas Production
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
Physical Sciences › Environmental Science › Environmental Engineering › Microbial Fuel Cells and Bioremediation
MeSH terms: Aged, 80 and over, Archaea, Base Composition, Feces, Humans, Male, Methane, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S, Sequence Analysis, DNA, DNA, Archaeal, Genome, Archaeal

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces

Abstract

Overview

Integrity signals

Verification

Claims the paper makes

Claims other papers make about this one

Citations

Cites

Cited by

Related

Metadata

Record

About these checks