PreprintCited by 31Systemic Lupus Erythematosus ResearchDNA and Nucleic Acid ChemistryEnzyme Structure and Function

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Structural features of Dnase1L3 responsible for serum antigen clearance

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Preprint — published as 10.1038/s42003-022-03755-5 · Paper page

Abstract

Autoimmunity develops when extracellular DNA released from dying cells is not cleared from serum. While serum DNA is primarily digested by Dnase1 and Dnase1L3, Dnase1 does not rescue autoimmunity arising from Dnase1L3 deficiencies. Dnase1L3 uniquely degrades antigenic forms of cell-free DNA, including DNA complexed with lipids and proteins. The distinct activity of Dnase1L3 relies on its unique C-terminal Domain (CTD), but the mechanism is unknown. We used multiple biophysical techniques and functional assays to study the interplay between the core catalytic domain and the CTD. While the core domain resembles Dnase1, there are several key differences between the two enzymes. Dnase1L3 is not inhibited by actin due to multiple differences in the actin recognition site. The CTD augments the ability of the core to bind DNA, thereby facilitating the degradation of complexed DNA to prevent autoimmune pathology. Together, these structural insights will inform the development of Dnase1L3-based therapies for autoimmunity.

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Research works printed but not linked: 69

  1. 10.1056/NEJMra1100359 · DOI
  2. 10.1002/art.38010 · DOI
  3. 10.1373/clinchem.2006.084509 · DOI
  4. 10.1126/science.aam8897 · DOI
  5. 10.1016/j.ydbio.2017.06.028 · DOI
  6. 10.1016/j.cell.2016.05.034 · DOI
  7. 10.1038/ng.975 · DOI
  8. 10.1084/jem.20201138 · DOI
  9. 10.3390/encyclopedia1030044 · DOI
  10. 10.1021/bi300873f · DOI
  11. 10.1006/jmbi.1996.0703 · DOI
  12. 10.1007/978-3-030-00710-2_22 · DOI
  13. 10.1093/nar/gkx1012 · DOI
  14. 10.1111/j.1742-4658.2008.06849.x · DOI
  15. 10.3389/fimmu.2019.01601 · DOI
  16. 10.1006/mthe.2002.0625 · DOI
  17. 10.1016/0378-1119(93)90491-K · DOI
  18. 10.1002/pro.5560070312 · DOI
  19. 10.1002/btpr.2439 · DOI
  20. 10.1271/bbb.80376 · DOI
  21. 10.1038/347037a0 · DOI
  22. 10.1074/jbc.273.29.18374 · DOI
  23. 10.1016/j.jcf.2015.02.001 · DOI
  24. 10.1073/pnas.93.16.8225 · DOI
  25. 10.1016/j.cca.2009.06.022 · DOI
  26. 10.1136/annrheumdis-2020-218810 · DOI
  27. 10.3892/mmr.2020.11547 · DOI
  28. 10.1021/acs.jctc.7b00125 · DOI · Paper page
  29. 10.1371/journal.pcbi.1001000 · DOI
  30. 1990, The chemical synthesis of a gene coding for bovine pancreatic DNase I and its cloning and expression in Escherichia coli, J Biol Chem, 265, 21889, 10.1016/S0021-9258(18)45822-X · DOI
  31. 10.1016/0022-2836(92)91064-V · DOI
  32. 10.1073/pnas.0507021102 · DOI
  33. 10.1016/0022-2836(91)90502-W · DOI
  34. 10.1073/pnas.0808082105 · DOI
  35. 10.1016/0022-2836(86)90280-9 · DOI
  36. 10.1002/prot.25608 · DOI
  37. 10.1016/j.bbrc.2006.11.078 · DOI
  38. 10.1371/journal.pone.0051282 · DOI
  39. 10.1073/pnas.0800256105 · DOI · Paper page
  40. 10.1093/nar/gkw389 · DOI
  41. 10.1088/0034-4885/66/10/r05 · DOI
  42. 10.1371/journal.pone.0049589 · DOI
  43. 1996, Actin filaments mediate DNA fiber formation in chronic inflammatory airway disease, Am J Pathol, 148, 919
  44. 10.1183/09031936.00006211 · DOI
  45. 10.3390/biom11030410 · DOI
  46. 10.1038/s41588-018-0216-7 · DOI
  47. 10.1016/j.ajhg.2013.12.002 · DOI
  48. 10.1110/ps.03438204 · DOI
  49. 10.3389/fimmu.2017.00522 · DOI
  50. 10.1016/j.jaut.2011.02.001 · DOI
  51. 10.1074/jbc.M111.307041 · DOI
  52. 10.1261/rna.2428111 · DOI
  53. 10.1107/S0907444912001308 · DOI · Paper page
  54. 10.1107/S0907444904019158 · DOI · Paper page
  55. 10.1007/bf00197809 · DOI
  56. 10.1002/prot.20449 · DOI
  57. 10.1006/jmbi.1996.0699 · DOI
  58. 10.1016/0022-2364(90)90202-K · DOI · Paper page
  59. 10.1021/bi963024k · DOI
  60. 10.1007/s10858-016-0072-7 · DOI
  61. 10.1107/S0021889892001663 · DOI
  62. 10.1107/s1600576720013412 · DOI
  63. 10.1002/cpbi.3 · DOI
  64. 10.1002/jcc.20945 · DOI · Paper page
  65. 10.1093/nar/gks375 · DOI
  66. 10.1002/prot.20922 · DOI
  67. 10.1093/nar/gki464 · DOI
  68. 10.1021/bi00304a009 · DOI
  69. 10.1021/bi00461a025 · DOI

Metadata

Authors
McCord, J. J., Engavale, M., Masoumzadeh, E., Villarreal, J., Mapp, B., Latham, M. P., Keyel, P. A., & Sutton, R. B.
Affiliations
Texas Tech University (US)
Corresponding author
Sutton, R. Bryan
Venue
Communications Biology
Publisher
openRxiv
Published
2022-01-20
Volume
5
Issue
1
Pages
825-825
ISSN
2399-3642 (ISSN-L)
OpenAlex
W4292004599
Cited by
31
References
1
Citations by year
2026: 10 · 2025: 8 · 2024: 6 · 2023: 6 · 2022: 1
FWCI
3.81
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • Communications Biology (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) (submittedVersion)
  • ThinkTech (Texas Tech University) (submittedVersion, cc-by)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • U.S. Department of Energy (76SF00515, DE–AC02–76SF00515, AC02‐76SF00515, No. DE-AC02–76SF00515, Contract No. DE-AC02-76SF00515, P30-GM133894, DE-AC02-)
  • CH Foundation
  • Texas Tech University
  • Lupus Research Alliance (707050)
  • Texas Tech University Health Sciences Center
  • National Institutes of Health (DE-AC02-76SF00515)
  • Office of Science (AC02-76SF00515, DE-AC02-76SF0051 5, DE-AC02, P30GM133894, 76SF00515)
  • National Institute of General Medical Sciences (DE-AC02-76SF00515, P30GM133894, R35GM128906)
  • Basic Energy Sciences (DE-AC02, P30GM133894, 76SF00515, Contract No. DE-AC02-76SF00515, AC02-76SF00515, DE-AC-02-76SF00515)
  • Biological and Environmental Research (DE- AC0276SF00515, P30GM133894)
  • SLAC National Accelerator Laboratory (DEAC02−76SF00515, AC02‐76SF00515, Contract No. DE-AC02-76SF00515)
Topics
  • Health Sciences › Medicine › Rheumatology › Systemic Lupus Erythematosus Research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Enzyme Structure and Function
Keywords
DNASE1L3, DNase1, autoimmunity, cell-free DNA, C-terminal domain, DNA binding, DNA degradation, autoimmune disease therapy
MeSH terms
Actins, DNA, Endodeoxyribonucleases

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