PreprintCited by 4Lipid Membrane Structure and BehaviorProtein Structure and DynamicsLipid metabolism and biosynthesis

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Mapping Structural and Dynamic Divergence Across the MBOAT family

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Preprint — published as 10.1016/j.str.2024.03.014 · Paper page

Abstract

Summary: Membrane Bound O -acyltransferases (MBOATs) are membrane embedded enzymes which catalyse acyl chain transfer to a diverse group of substrates including lipids, small-molecules and proteins. Recent MBOAT structures reveal a conserved structural core, despite wide-ranging functional specificity across both prokaryotes and eukaryotes. The structural basis of catalytic specificity, regulation and interactions with the surrounding environment remain uncertain, hindering effective therapeutic targeting. Here, we combine comparative molecular dynamics (MD) simulations with bioinformatics to assess molecular and interactional divergence across the family. In simulations, MBOATs differentially distort the bilayer depending on their substrate type. Additionally, we identify specific lipid binding sites surrounding MBOAT reactant gates into the surrounding membrane. We use bioinformatics to reveal a conserved role for re-entrant loop-2 in stabilisation of the MBOAT fold and identify a key hydrogen bond involved in DGAT1 dimerisation. Finally, we predict differences in MBOAT core solvation and water gating properties across the family. These data are pertinent to the design of MBOAT specific inhibitors that encompass dynamic information within cellular mimetic environments.

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Metadata

Authors
Ansell, T. B., Healy, M., Coupland, C. E., Sansom, M. S. P., & Siebold, C.
Affiliations
  • SLAC National Accelerator Laboratory (US)
  • University of Oxford (GB)
  • Centre for Human Genetics (GB)
Corresponding author
Ansell, T. Bertie
Venue
Structure
Publisher
openRxiv
Published
2023-12-18
Volume
32
Issue
7
Pages
1011-1022.e3
ISSN
0969-2126 (ISSN-L)
OpenAlex
W4394893759
Cited by
4
References
1
Citations by year
2026: 2 · 2025: 2
FWCI
0.54
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • Structure (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) (submittedVersion, cc-by)
Funders
  • Wellcome Trust (102164/Z/13/Z)
  • Cancer Research UK (DRCRPG-May23, DRCRPG-May23 / 100002, C20724 / A26752, 26752, A26752, C20724, 100002)
  • Partnership for Advanced Computing in Europe AISBL (2016163984)
  • Hospital for Sick Children (208361/Z/17/Z)
  • Biotechnology and Biological Sciences Research Council (BB/T01508X/1, BB/R00126X/1)
  • European Research Council
  • H2020 European Research Council (647278)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
Keywords
DGAT1, lipid binding sites, dimerization, hydrogen bonding, solvation, enzyme specificity
MeSH terms
Acyltransferases, Binding Sites, Humans, Hydrogen Bonding, Lipid Bilayers, Protein Binding, Substrate Specificity, Catalytic Domain, Protein Multimerization, Molecular Dynamics Simulation

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