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Hybrid Exb/Mot stators require substitutions distant from the chimeric pore to power flagellar rotation
Open accessPreprint — published as 10.1128/jb.00140-24
Abstract
Powered by ion transport across the cell membrane, conserved ion-powered rotary motors (IRMs) drive bacterial motility by generating torque on the rotor of the bacterial flagellar motor. Homologous heteroheptameric IRMs have been structurally characterized in ion channels such as Tol/Ton/Exb/Gld, and most recently in phage defense systems such as Zor. Functional stator complexes synthesized from chimeras of PomB/MotB (PotB) have been used to study flagellar rotation at low ion-motive force achieved via reduced external sodium concentration. The function of such chimeras is highly sensitive to the location of the fusion site, and these hybrid proteins have thus far been arbitrarily designed. To date, no chimeras have been constructed using interchange of components from Tol/Ton/Exb/Gld and other ion powered motors with more distant homology. Here we synthesised chimeras of MotAB, PomAPotB and ExbBD to assess their capacity for cross-compatibility. We generated motile strains powered by stator complexes with B-subunit chimeras. This motility was further optimised by directed evolution. Whole genome sequencing of these strains revealed that motility-enhancing residue changes occurred in the A-subunit and at the peptidoglycan binding domain of the B-unit, which could improve motility. Overall, our work highlights the complexity of stator architecture and identifies the challenges associated with rational design of chimeric IRMs.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Metadata
- Authors
- Ridone, P., & Baker, M. A.
- Affiliations
- UNSW Sydney (AU)
- Corresponding author
- Baker, Matthew AB
- Venue
- Journal of Bacteriology
- Publisher
- openRxiv
- Published
- 2024-03-12
- Volume
- 206
- Issue
- 10
- Pages
- e0014024-e0014024
- ISSN
- 0021-9193 (ISSN-L)
- PMC
- PMC11500575
- OpenAlex
- W4402581863
- Cited by
- 4
- References
- 1
- Citations by year
- 2025: 2 · 2024: 2
- FWCI
- 1.06
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- Locations
- Journal of Bacteriology (publishedVersion)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- University of New South Wales
- Department of Education and Training (DP190100497)
- U.S. Navy
- Office of Naval Research
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Advanced Electron Microscopy Techniques and Applications
- Keywords
- flagellar motor, bacterial motility, directed evolution, peptidoglycan-binding domain, ion transport
- MeSH terms
- Bacterial Proteins, Escherichia coli, Flagella, Recombinant Fusion Proteins, Rotation, Molecular Motor Proteins
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