PreprintCited by 15Artificial Intelligence in Healthcare and EducationElectronic Health Records SystemsMachine Learning in Healthcare

Benchmarking And Datasets For Ambient Clinical Documentation: A Scoping Review Of Existing Frameworks And Metrics For AI-Assisted Medical Note Generation

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Gebauer, Sarah·2025·medRxiv

Abstract

Background: The increasing adoption of ambient artificial intelligence (AI) scribes in healthcare has created an urgent need for robust evaluation frameworks to assess their performance and clinical utility. While these tools show promise in reducing documentation burden, there remains no standardized approach for measuring their effectiveness and safety. Objective: To systematically review existing evaluation frameworks and metrics used to assess AI-assisted medical note generation from doctor-patient conversations, and provide recommendations for future evaluation approaches. Methods: A scoping review following PRISMA guidelines was conducted across PubMed, IEEE Explore, Scopus, Web of Science, and Embase to identify studies evaluating ambient scribe technology between 2020-2025. Studies were included if they were peer-reviewed, focused on clinical ambient scribe evaluation from speaking to note production, and described an evaluation approach. Extracted data included evaluation metrics, benchmarking approaches, dataset characteristics, and model performance. Results: Seven studies met inclusion criteria. Evaluation approaches varied widely, from traditional natural language processing metrics like ROUGE and BERTScore to domain-specific measures such as clinical accuracy and bias. Critical gaps identified include: 1) wide diversity of evaluation metrics making cross-study comparison challenging, 2) limited integration of clinical relevance in automated metrics, 3) lack of standardized approaches for crucial metrics like hallucinations and errors, and 4) minimal diversity in clinical specialties evaluated. Only two datasets were publicly available for benchmarking. Conclusions: This review reveals significant heterogeneity in how ambient scribes are evaluated, highlighting the need for standardized evaluation frameworks. We propose recommendations for developing comprehensive evaluation approaches that combine automated metrics with clinical quality measures. Future work should focus on creating public benchmarks across diverse clinical settings and establishing consensus on critical safety and quality metrics.

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Research works printed but not linked: 5

  1. Asma Ben Abacha, Wen-wai Yim, Yadan Fan, and Thomas Lin. 2023. An Empirical Study of Clinical Note Generation from Doctor-Patient Encounters. In Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics, pages 2291-2302, Dubrovnik, Croatia. Association for Computational Linguistics.
  2. Kernberg A, Gold JA, Mohan V. Using ChatGPT-4 to Create Structured Medical Notes From Audio Recordings of Physician-Patient Encounters: Comparative Study. J Med Internet Res. 2024;26:e54419. Published 2024 Apr 22. doi:10.2196/54419 · DOI · Paper page
  3. Yim, Ww., Fu, Y., Ben Abacha, A. et al. Aci-bench: a Novel Ambient Clinical Intelligence Dataset for Benchmarking Automatic Visit Note Generation. Sci Data 10, 586 (2023). https://doi.org/10.1038/s41597-023-02487-3. · DOI · Paper page
  4. Aaron Tierney, Gregg Gayre, Brian Hoberman, Britt MAttern, Manuel Ballesca, Patricia Kipnis, Vincent Liu, Kristine Lee. Ambient Artificial Intelligence Scribes to Alleviate the Burden of Clinical Documentation. NEJM Catalyst. doi: 10.1056/CAT.23.0404. · DOI · Paper page
  5. Afshar M, et al. A Novel Playbook for Pragmatic Trial Operations to Monitor and Evaluate Ambient Artificial Intelligence in Clinical Practice. medRxiv 2024.12.27.24319685; doi: https://doi.org/10.1101/2024.12.27.24319685. Accessed 26th Jan 2025. 18 https://www.medrxiv.org/content/10.1101/2024.09.12.24313556v1. Accessed 27th Jan 2025. 17 https://arxiv.org/abs/2409.16307. Accessed 20th Jan 2025. 16 https://arxiv.org/html/2408.14568v1. Accessed 20th Jan 2025. · DOI

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Authors
Gebauer, S.
Corresponding author
Gebauer, Sarah
Venue
medRxiv
Publisher
openRxiv
Published
2025-01-29
OpenAlex
W4407003879
Cited by
15
References
0
Citations by year
2026: 8 · 2025: 7
Type
posted content
Language
en
Open access
Locations
medRxiv (acceptedVersion, cc-by-nc)
Topics
  • Health Sciences › Medicine › Health Informatics › Artificial Intelligence in Healthcare and Education
  • Health Sciences › Health Professions › Health Information Management › Electronic Health Records Systems
  • Physical Sciences › Computer Science › Artificial Intelligence › Machine Learning in Healthcare
Keywords
ambient AI scribes, clinical documentation, evaluation metrics, benchmarking, hallucination detection, clinical accuracy, clinical bias, doctor-patient conversation, natural language processing evaluation, clinical quality indicators

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