PreprintCited by 1Bacterial Identification and Susceptibility TestingSepsis Diagnosis and TreatmentBiosensors and Analytical Detection

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Low-Cost In-House Re-formulated Brain Heart Infusion Medium for Effective Planktonic Growth and Early Detection of Bloodstream Bacterial Pathogens

Open access
Hira, Jonathan, Bin Mahbub, Nasib, Ali, Jawad, Ahmad, Rafi·2025·Frontiers in Microbiology

Preprint — published as 10.3389/fmicb.2025.1680006 · Paper page

Abstract

Sepsis, a clinically defined life-threatening condition, is a global contributor to high morbidity and mortality rates in humans. It is caused by systemic bloodstream bacterial infections, primarily involving aerobic pathogens such as Escherichia coli, Staphylococcus aureus , and Klebsiella pneumoniae . Rapid and accurate identification of these pathogens is a high-demand task, as prolonged diagnosis may increase the mortality rate among sepsis patients. Worldwide, commercial blood culture systems, such as BD BACTEC™ PLUS Aerobic/F /F culture bottles (used in this study), are routinely used to monitor bloodstream infections. However, due to high costs ($10.00-$15.00/bottle), limited availability of culture media (especially in low- and middle-income countries, and war zones), and a lack of customization for antibiotic susceptibility assay and epidemiology research, there is a need for secondary alternatives to facilitate the growth and identification of bloodborne pathogens. Therefore, we developed a low-cost ($4–$5/bottle) in-house culture medium with a newly improved formulation of Brain Heart Infusion media that enhances bacterial growth from spiked human blood tested on a panel of bacteria ( Escherichia coli, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa , and Enterococcus faecalis ). The growth dynamics of these microbes in in-house formulated BHI-Blood+ culture media coincide with those in BACTEC™ Plus Aerobic/F culture vials, which primarily suggests the compatibility of bloodborne pathogens with this media and can be flagged positive <8h based on cellular growth rate. Additionally, conventional qPCR-based early detection (< 24h) and validation with the Oxford Nanopore MinION NGS platform highlight the value of this in-house culture media as an alternative to commercial culture media in terms of low-cost availability.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1101/2025.07.08.663789

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 50

  1. 10.1001/jama.2016.0287 · DOI · Paper page
  2. 10.1007/s00134-021-06506-y · DOI · Paper page
  3. 10.1016/S0140-6736(19)32989-7 · DOI · Paper page
  4. 10.1056/NEJMp1707170 · DOI
  5. 10.1097/CCM.0000000000003342 · DOI · Paper page
  6. 10.1097/01.CCM.0000217961.75225.E9 · DOI · Paper page
  7. 10.1016/S1473-3099(17)30753-3 · DOI · Paper page
  8. 10.1111/j.1469-0691.2012.03815.x · DOI
  9. 10.1128/CMR.00102-19 · DOI
  10. 10.1007/s15010-021-01717-3 · DOI
  11. 10.1128/CMR.00058-07 · DOI
  12. 10.3389/fmed.2019.00131 · DOI
  13. 10.3390/ijms24065633 · DOI
  14. 10.1128/jcm.00231-21 · DOI
  15. 10.1016/j.ebiom.2024.105004 · DOI
  16. 10.1093/ofid/ofae479 · DOI
  17. 10.1016/j.ajic.2018.12.020 · DOI
  18. 10.1371/journal.pone.0267491 · DOI
  19. 10.1128/jcm.00192-22 · DOI
  20. 10.1146/annurev-pathmechdis-012418-012751 · DOI · Paper page
  21. 10.1201/EBK1439804063 · DOI
  22. 10.1007/BF01975812 · DOI
  23. 10.1016/j.nmni.2019.100622 · DOI
  24. 10.1038/s41596-023-00850-7 · DOI · Paper page
  25. Growth rates made easy - PubMed. [cited 6 Jul 2025]. Available: https://pubmed.ncbi.nlm.nih.gov/24170494/
  26. 10.1111/j.1467-9868.2005.00503.x · DOI · Paper page
  27. 10.1038/s41564-023-01350-w · DOI
  28. 10.3389/fimmu.2020.01066 · DOI · Paper page
  29. 10.1016/j.jiac.2025.102664 · DOI
  30. 10.4014/jmb.2207.07057 · DOI
  31. 10.1016/j.nutres.2021.09.001 · DOI
  32. 10.1016/j.nbt.2019.09.005 · DOI
  33. 10.3389/fmicb.2022.855331 · DOI
  34. 10.1186/s44158-025-00241-2 · DOI
  35. 10.1124/pr.56.3.1 · DOI · Paper page
  36. 10.1186/1471-2180-14-180 · DOI
  37. 10.1080/21505594.2021.1882780 · DOI
  38. 10.3390/ijms242115646 · DOI
  39. 10.1016/S0024-3205(00)00891-2 · DOI
  40. 10.1172/jci.insight.92002 · DOI · Paper page
  41. 10.1016/j.japr.2020.09.016 · DOI
  42. 10.1128/JCM.01985-09 · DOI
  43. 10.1016/j.ijid.2024.107769 · DOI
  44. 10.1016/j.cmi.2021.05.016 · DOI
  45. 10.1038/s41598-024-55635-z · DOI
  46. 10.1128/jcm.34.1.126-129.1996 · DOI
  47. 10.1016/j.jmii.2013.10.006 · DOI
  48. 10.1093/jac/dkae282 · DOI · Paper page
  49. 10.1016/j.gheart.2014.08.009 · DOI
  50. 10.1016/j.mimet.2018.12.011 · DOI

Metadata

Authors
Hira, J., Bin Mahbub, N., Ali, J., & Ahmad, R.
Affiliations
University of Inland Norway (NO)
Corresponding author
Ahmad, Rafi
Venue
Frontiers in Microbiology
Publisher
openRxiv
Published
2025-07-08
Volume
16
Pages
1680006-1680006
ISSN
1664-302X (ISSN-L)
OpenAlex
W4416896161
Cited by
1
References
1
Citations by year
2026: 1
FWCI
0.64
Type
journal article
Language
en
Open access
Locations
  • Frontiers in Microbiology (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nd)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • PubMed Central (publishedVersion, cc-by)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
Norges Forskningsråd (rcn-foriss-336420)
Topics
  • Health Sciences › Medicine › Microbiology (medical) › Bacterial Identification and Susceptibility Testing
  • Health Sciences › Medicine › Critical Care and Intensive Care Medicine › Sepsis Diagnosis and Treatment
  • Physical Sciences › Engineering › Biomedical Engineering › Biosensors and Analytical Detection
Keywords
brain heart infusion medium, low-cost culture medium, blood culture, sepsis, Escherichia coli, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, Enterococcus faecalis, Oxford Nanopore MinION, qPCR detection, low- and middle-income countries

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review