USP21 deubiquitinase elevates macropinocytosis to enable oncogenic KRAS bypass in pancreatic cancer
Open accessAbstract
Activating mutations in KRAS (KRAS*) are present in nearly all pancreatic ductal adenocarcinoma (PDAC) cases and critical for tumor maintenance. By using an inducible KRAS* PDAC mouse model, we identified a deubiquitinase USP21-driven resistance mechanism to anti-KRAS* therapy. USP21 promotes KRAS*-independent tumor growth via its regulation of MARK3-induced macropinocytosis, which serves to maintain intracellular amino acid levels for anabolic growth. The USP21-mediated KRAS* bypass, coupled with the frequent amplification of USP21 in human PDAC tumors, encourages the assessment of USP21 as a novel drug target as well as a potential parameter that may affect responsiveness to emergent anti-KRAS* therapy.
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Studies of the iKras mouse model have highlighted mechanisms to enable bypass of oncogenic KRAS addiction, including adoption of a KRAS-independent cell state dependent on oxidative phosphorylation, induction of SMARCB-MYC-network-driven mesenchymal reprogramming, activation of the TGFβ-SMAD3/4 axis via TME remodeling, and USP21-mediated upregulation of macropinocytosis.
“Furthermore, studies of the iKras mouse model have highlighted myriad mechanisms to enable bypass of oncogenic KRAS addiction, including the adoption of a KRAS-independent cell state dependent on oxidative phosphorylation (5), induction of SMARCB–MYC-network-driven mesenchymal reprogramming (38), activation of the TGFβ-SMAD3/4 axis via TME remodeling (39), and USP21-mediated upregulation of macrop”
From Mechanisms of Resistance to Oncogenic KRAS Inhibition in Pancreatic Cancer (2024) · cites this paper as [40]
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Cites
Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., Paulovich, A., Pomeroy, S. L., Golub, T. R., Lander, E. S., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0506580102 · Cited by 53,625 · see citing works
Oncogenic Kras maintains pancreatic tumors through regulation of anabolic glucose metabolism
Ying, H., Kimmelman, A. C., Lyssiotis, C. A., Hua, S., Chu, G. C., Fletcher-Sananikone, E., Locasale, J. W., Son, J., Zhang, H., Coloff, J. L., et al. (2012) · Cell · doi:10.1016/j.cell.2012.01.058 · Cited by 2,043 · see citing works
Self-citationMacropinocytosis of protein is an amino acid supply route in Ras-transformed cells
Commisso, C., Davidson, S. M., Soydaner-Azeloglu, R. G., Parker, S. J., Kamphorst, J. J., Hackett, S., Grabocka, E., Nofal, M., Drebin, J. A., Thompson, C. B., et al. (2013) · Nature · doi:10.1038/nature12138 · Cited by 1,683 · see citing works
Aguirre, A. J., Bardeesy, N., Sinha, M., Lopez, L., Tuveson, D. A., Horner, J., Redston, M. S., & DePinho, R. A. (2003) · Genes & Development · doi:10.1101/gad.1158703 · Cited by 1,033 · see citing works
Self-citationTranscriptional control of autophagy-lysosome function drives pancreatic cancer metabolism
Perera, R. M., Stoykova, S., Nicolay, B. N., Ross, K. N., Fitamant, J., Boukhali, M., Lengrand, J., Deshpande, V., Selig, M. K., Ferrone, C. R., et al. (2015) · Nature · doi:10.1038/nature14587 · Cited by 799 · see citing works
KRAS and YAP1 Converge to Regulate EMT and Tumor Survival
Shao, D. D., Xue, W., Krall, E. B., Bhutkar, A., Piccioni, F., Wang, X., Schinzel, A. C., Sood, S., Rosenbluh, J., Kim, J. W., et al. (2014) · Cell · doi:10.1016/j.cell.2014.06.004 · Cited by 744 · see citing works
Yap1 Activation Enables Bypass of Oncogenic Kras Addiction in Pancreatic Cancer
Kapoor, A., Yao, W., Ying, H., Hua, S., Liewen, A., Wang, Q., Zhong, Y., Wu, C.-J., Sadanandam, A., Hu, B., et al. (2014) · Cell · doi:10.1016/j.cell.2014.06.003 · Cited by 716 · see citing works
Self-citationThe utilization of extracellular proteins as nutrients is suppressed by mTORC1
Palm, W., Park, Y., Wright, K., Pavlova, N. N., Tuveson, D. A., & Thompson, C. B. (2015) · Cell · doi:10.1016/j.cell.2015.06.017 · Cited by 457 · see citing works
Tumor Microenvironment Remodeling Enables Bypass of Oncogenic KRAS Dependency in Pancreatic Cancer
Hou, P., Kapoor, A., Zhang, Q., Li, J., Wu, C.-J., Li, J., Lan, Z., Tang, M., Ma, X., Ackroyd, J. J., et al. (2020) · Cancer Discovery · doi:10.1158/2159-8290.cd-19-0597 · Cited by 154 · see citing works
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Research works printed but not linked: 21
- Bengtsson A, Andersson R, Ansari D. 2020. The actual 5-year survivors of pancreatic ductal adenocarcinoma based on real-world data. Sci Rep 10: 16425. 10.1038/s41598-020-73525-y 33009477 PMC7532215 · DOI
- Bröer S, Bröer A. 2017. Amino acid homeostasis and signalling in mammalian cells and organisms. Biochem J 474: 1935– 1963. 10.1042/BCJ20160822 28546457 PMC5444488 · DOI
- Bryant KL, Stalnecker CA, Zeitouni D, Klomp JE, Peng S, Tikunov AP, Gunda V, Pierobon M, Waters AM, George SD, 2019. Combination of ERK and autophagy inhibition as a treatment approach for pancreatic cancer. Nat Med 25: 628– 640. 10.1038/s41591-019-0368-8 30833752 PMC6484853 · DOI · Paper page
- Condon KJ, Sabatini DM. 2019. Nutrient regulation of mTORC1 at a glance. J Cell Sci 132: jcs222570. 10.1242/jcs.222570 31722960 PMC6857595 · DOI
- Egami Y, Taguchi T, Maekawa M, Arai H, Araki N. 2014. Small GTPases and phosphoinositides in the regulatory mechanisms of macropinosome formation and maturation. Front Physiol 5: 374. 10.3389/fphys.2014.00374 25324782 PMC4179697 · DOI
- Hay N. 2016. Reprogramming glucose metabolism in cancer: can it be exploited for cancer therapy? Nat Rev Cancer 16: 635– 649. 10.1038/nrc.2016.77 27634447 PMC5516800 · DOI
- Hingorani SR, Petricoin EF, Maitra A, Rajapakse V, King C, Jacobetz MA, Ross S, Conrads TP, Veenstra TD, Hitt BA, 2003. Preinvasive and invasive ductal pancreatic cancer and its early detection in the mouse. Cancer Cell 4: 437– 450. 10.1016/S1535-6108(03)00309-X 14706336 · DOI · Paper page
- Hou P, Ma X, Zhang Q, Wu CJ, Liao W, Li J, Wang H, Zhao J, Zhou X, Guan C, 2019. USP21 deubiquitinase promotes pancreas cancer cell stemness via Wnt pathway activation. Genes Dev 33: 1361– 1366. 10.1101/gad.326314.119 31488580 PMC6771391 · DOI · Paper page
- Kamphorst JJ, Nofal M, Commisso C, Hackett SR, Lu W, Grabocka E, Vander Heiden MG, Miller G, Drebin JA, Bar-Sagi D, 2015. Human pancreatic cancer tumors are nutrient poor and tumor cells actively scavenge extracellular protein. Cancer Res 75: 544– 553. 10.1158/0008-5472.CAN-14-2211 25644265 PMC4316379 · DOI · Paper page
- Kimmelman AC. 2015. Metabolic dependencies in RAS-driven cancers. Clin Cancer Res 21: 1828– 1834. 10.1158/1078-0432.CCR-14-2425 25878364 PMC4400826 · DOI
- Kinsey CG, Camolotto SA, Boespflug AM, Guillen KP, Foth M, Truong A, Schuman SS, Shea JE, Seipp MT, Yap JT, 2019. Protective autophagy elicited by RAF → MEK → ERK inhibition suggests a treatment strategy for RAS-driven cancers. Nat Med 25: 620– 627. 10.1038/s41591-019-0367-9 30833748 PMC6452642 · DOI · Paper page
- Matenia D, Mandelkow EM. 2009. The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci 34: 332– 342. 10.1016/j.tibs.2009.03.008 19559622 · DOI
- Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, Lehar J, Puigserver P, Carlsson E, Ridderstråle M, Laurila E, 2003. PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat Genet 34: 267– 273. 10.1038/ng1180 12808457 · DOI · Paper page
- Pannu J, Belle JI, Förster M, Duerr CU, Shen S, Kane L, Harcourt K, Fritz JH, Clare S, Nijnik A. 2015. Ubiquitin specific protease 21 is dispensable for normal development, hematopoiesis and lymphocyte differentiation. PLoS One 10: e0117304. 10.1371/journal.pone.0117304 25680095 PMC4332479 · DOI · Paper page
- Recouvreux MV, Commisso C. 2017. Macropinocytosis: a metabolic adaptation to nutrient stress in cancer. Front Endocrinol (Lausanne) 8: 261. 10.3389/fendo.2017.00261 29085336 PMC5649207 · DOI · Paper page
- Sowa ME, Bennett EJ, Gygi SP, Harper JW. 2009. Defining the human deubiquitinating enzyme interaction landscape. Cell 138: 389– 403. 10.1016/j.cell.2009.04.042 19615732 PMC2716422 · DOI
- Yan L, Tu B, Yao J, Gong J, Carugo A, Bristow CA, Wang Q, Zhu C, Dai B, Kang Y, 2021. Targeting glucose metabolism sensitizes pancreatic cancer to MEK inhibition. Cancer Res 81: 4054– 4065. 10.1158/0008-5472.CAN-20-3792 34117030 PMC8338909 · DOI · Paper page
- Yang S, Wang X, Contino G, Liesa M, Sahin E, Ying H, Bause A, Li Y, Stommel JM, Dell'antonio G, 2011. Pancreatic cancers require autophagy for tumor growth. Genes Dev 25: 717– 729. 10.1101/gad.2016111 21406549 PMC3070934 · DOI · Paper page
- Yao W, Rose JL, Wang W, Seth S, Jiang H, Taguchi A, Liu J, Yan L, Kapoor A, Hou P, 2019. Syndecan 1 is a critical mediator of macropinocytosis in pancreatic cancer. Nature 568: 410– 414. 10.1038/s41586-019-1062-1 30918400 PMC6661074 · DOI · Paper page
- Yuan M, Breitkopf SB, Yang X, Asara JM. 2012. A positive/negative ion-switching, targeted mass spectrometry-based metabolomics platform for bodily fluids, cells, and fresh and fixed tissue. Nat Protoc 7: 872– 881. 10.1038/nprot.2012.024 22498707 PMC3685491 · DOI
- Yuan M, Kremer DM, Huang H, Breitkopf SB, Ben-Sahra I, Manning BD, Lyssiotis CA, Asara JM. 2019. Ex vivo and in vivo stable isotope labelling of central carbon metabolism and related pathways with analysis by LC-MS/MS. Nat Protoc 14: 313– 330. 10.1038/s41596-018-0102-x 30683937 PMC7382369 · DOI
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Mechanisms of Resistance to Oncogenic KRAS Inhibition in Pancreatic Cancer
Dilly, J., Hoffman, M. T., Abbassi, L., Li, Z., Paradiso, F., Parent, B. D., Hennessey, C. J., Jordan, A. C., Morgado, M., Dasgupta, S., et al. (2024) · Cancer Discovery · doi:10.1158/2159-8290.cd-24-0177 · Cited by 276 · see citing works
“…including the adoption of a KRAS-independent cell state dependent on oxidative phosphorylation (5), induction of SMARCB–MYC-network-driven mesenchymal reprogramming (38), activation of the TGF β - SMAD3/4 axis via TME remodeling (39), and USP21-mediated upregulation of macropinocytosis (40).”
Background
- Authors
- Hou, P., Ma, X., Yang, Z., Zhang, Q., Wu, C.-J., Li, J., Tan, L., Yao, W., Yan, L., Zhou, X., Kimmelman, A. C., Lorenzi, P. L., Zhang, J., Jiang, S., Spring, D., Wang, Y. A., & DePinho, R. A.
- Affiliations
- The University of Texas MD Anderson Cancer Center (US)
- Jilin University (CN)
- NYU Langone Health (US)
- Corresponding author
- Wang, Y. Alan
- ORCID
- Venue
- Genes & Development
- Publisher
- Cold Spring Harbor Laboratory
- Published
- 2021-09-16
- Volume
- 35
- Issue
- 19-20
- Pages
- 1327-1332
- ISSN
- 0890-9369 (ISSN-L)
- 1549-5477
- PMC
- PMC8494209
- OpenAlex
- W3199777965
- Cited by
- 35
- References
- 9
- Citations by year
- 2026: 4 · 2025: 8 · 2024: 7 · 2023: 6 · 2022: 9 · 2021: 1
- Type
- posted content
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by-nc
- Locations
- Genes & Development (publishedVersion, cc-by-nc)
- PubMed Central (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- Funders
- Seed Grant Program
- Hirshberg Foundation for Pancreatic Cancer Research
- NIH (R01 CA231349, P01 CA117969, R01 CA225955)
- Topics
- Health Sciences › Medicine › Oncology › Pancreatic and Hepatic Oncology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Keywords
- USP21, deubiquitinase, macropinocytosis, KRAS, pancreatic ductal adenocarcinoma, MARK3, amino acid uptake, therapeutic target
- MeSH terms
- Deubiquitinating Enzymes, Animals, Pancreatic Neoplasms, Proto-Oncogene Proteins p21(ras), Carcinoma, Pancreatic Ductal, Ubiquitin Thiolesterase, Cell Line, Tumor, Mice
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