Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome

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Items 301–384 of 384

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  7. Screening for SNPs with Allele-Specific Methylation Based on Next-Generation Sequencing Data
    Bo Hu, Yuan Ji, Yaomin Xu, Angela H. Ting · 2013 · Statistics in Biosciences
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  12. Pharmacoepigenomics in Personalized Medicine: A Hypothesis-Generating Approach to Introduce CpG-PGx SNPs as New Candidates for a Systematic Insight into Genomic-Epigenomic-Phenomic-Pharmacogenomics (G-E-Ph-PGx) Axis
    A. Sharafshah, Kenneth Blum, K. Lewandrowski, I. Elman, Brian S. Fuehrlein, David Baron, A. Pinhasov, Panayotis K. Thanos, R. Fiorelli, S. Schmidt et al. · 2025 · Journal of Personalized Medicine
  13. Multi-omics analyses identify potential epigenetic loci associated with survival in amyotrophic lateral sclerosis across diverse populations
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  14. Haplotypes of CpG-related SNPs and associations with DNA methylation patterns
    Yiyi Ma, Caren E. Smith, Yu‐Chi Lee, Laurence D. Parnell, Chao‐Qiang Lai, José María Ordovás · 2015 · Cambridge University Press eBooks
  15. Fundamentals of Proteomics
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  16. Lung Cancer: Genetic Susceptibility
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  17. Identifying key DNA methylation sites and their cis-methylation quantitative loci for intramuscular fatty acid traits using genome and methylome data in Yorkshire pigs
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  18. Personalized Epigenetics
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  19. Interindividual Variability of DNA Methylation
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  20. The Role of the Genetic Code in the DNA Methylation Landscape Formation
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  21. Constructing Hepitypes: Phasing Local Genotype and DNA Methylation
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  22. A Long Polymorphic GT Microsatellite within a Gene Promoter Mediates Non-Imprinted Allele-Specific DNA Methylation of a CpG Island in a Goldfish Inter-Strain Hybrid
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  23. Development of a Method for Identifying and Functionally Analyzing Allele-Specific DNA Methylation Based on BS-Seq Data
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  24. Natural Selection on Exonic SNPs Shapes Allelic Expression Imbalance (AEI) Adaptability in Lung Cancer Progression
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  25. Epigenetic mechanisms of asthma and allergy
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  26. CpG traffic lights are markers of regulatory regions in humans
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  28. Allelic expression imbalance of PIK3CA mutations is frequent in breast cancer and prognostically significant
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  30. Blood DNA methylation biomarkers for breast cancer risk
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  32. Epidemiology of childhood germ cell tumors (GCT): epigenome-wide methylation, differential MiRNA expression, and catchment quality of the CCRN
    Jessica R.B. Musselman · 2013 · University of Minnesota Digital Conservancy (University of Minnesota)
  33. Age-related methylation profiles of equine blood leukocytes in the RNASEL locus
    Tomasz Ząbek, E. Semik, Tomasz Szmatoła, Bernadetta Oklejewicz, Agnieszka Fornal, Monika Bugno‐Poniewierska · 2015 · Journal of Applied Genetics
  34. Genetic Variants Associated with DNA methylation
    Fan Wang, M Zhang, Wen Y.H, Zhang S.J · 2015 · Cancer Genetics and Epigenetics
  35. METHOD Open Access
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  36. Epigenetic Epidemiology of Cancer
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  37. Veränderungen der DNA-Methylierung bei männlicher Infertilität
    Carolin Friemel · 2015 · Multimedialen Archiv und Publikationsserver der Christian-Albrechts-Universität zu Kiel (Christian-Albrechts-Universität zu Kiel)
  38. Genetic-epigenetic Interactions: Sequence-dependent and Independent DNA Nethylation
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  39. Introduction to genome-wide association studies and personalized medicine
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  41. Discovery of problematic probes in illumina DNA methylation microarrays
    Y. Ann Chen · 2015 · TSpace (University of Toronto)
  42. Measuring CpG Methylation by SMRT Sequencing
    Yuta Suzuki, Jonas Korlach, Shinichi Morishita · 2017 · Elsevier eBooks
  43. Contribution of genetic variation and developmental stage to methylome dynamics in myeloid differentiation
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  46. Genomic Region Detection via Spatial Convex Clustering
    John Nagorski, Genevera I. Allen · 2016 · arXiv (Cornell University)
  47. The Pharmacoepigenomics Informatics Pipeline and H-GREEN Hi-C Compiler: Discovering Pharmacogenomic Variants and Pathways with the Epigenome and Spatial Genome
    Ari Allyn-Feuer · 2018 · Deep Blue (University of Michigan)
  48. DNA Methylation of Repeat Regions in Human Cancer and Metabolic Disease
    Haley L. Cash · 2011
  49. States of Allelic Imbalance on the X Chromosomes in Human Females
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  50. Lung Cancer: Genetic Susceptibility
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  51. Advances in Single Molecule, Real-Time (SMRT) Sequencing
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  52. NOMe-HiC: joint profiling of genetic variants, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
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  55. Methyl-SNP-seq reveals dual readouts of methylome and variome at molecule resolution
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    Benjamin Planterose Jiménez, Brontë Kolar, Manfred Kayser, Athina Vidaki · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  57. Additional file 5 of Noninvasive detection of pancreatic ductal adenocarcinoma using the methylation signature of circulating tumour DNA
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  58. Additional file 3 of Noninvasive detection of pancreatic ductal adenocarcinoma using the methylation signature of circulating tumour DNA
    Huanwen Wu, Shiwei Guo, Xiaoding Liu, Yatong Li, Zhixi Su, Qiye He, Xiaoqian Liu, Zhiwen Zhang, Lianyuan Yu, Xiaohan Shi et al. · 2022 · Figshare
  59. Additional file 4 of Noninvasive detection of pancreatic ductal adenocarcinoma using the methylation signature of circulating tumour DNA
    Huanwen Wu, Shiwei Guo, Xiaoding Liu, Yatong Li, Zhixi Su, Qiye He, Xiaoqian Liu, Zhiwen Zhang, Lianyuan Yu, Xiaohan Shi et al. · 2022 · Figshare
  60. Beyond the “Dominant” and “Recessive” Patterns of Inheritance
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  61. CpG Traffic Lights Are Involved in Active DNA Demethylation
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  63. The role of DNA methylation in the regulation of HLA expression
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  64. Additional file 1 of DAMEfinder: a method to detect differential allele-specific methylation
    Stephany Orjuela, Dania Machlab, Mirco Menigatti, Giancarlo Marra, Mark D. Robinson · 2020 · Figshare
  65. Additional file 3 of NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
    Fu, Hailu, Zheng, Haizi, Chen, Xiaoting, Matthew T. Weirauch, Muglia, Louis J., Li Wang, Yaping Liu · 2024 · Figshare
  66. Additional file 5 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  67. Additional file 3 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  68. Additional file 2 of Noninvasive detection of pancreatic ductal adenocarcinoma using the methylation signature of circulating tumour DNA
    Wu, Huanwen, Guo, Shiwei, Liu, Xiaoding, Yatong Li, Su, Zhixi, He, Qiye, Liu, Xiaoqian, Zhang, Zhiwen, Lianyuan Yu, Shi, Xiaohan et al. · 2022 · Figshare
  69. Additional file 1 of NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
    Fu, Hailu, Zheng, Haizi, Chen, Xiaoting, Matthew T. Weirauch, Muglia, Louis J., Li Wang, Yaping Liu · 2024 · Figshare
  70. Additional file 2 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  71. Additional file 6 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  72. Additional file 1 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  73. Additional file 4 of Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease
    Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L Macleod, Christopher E. Randolph, Nianjun Liu, John S. Witte et al. · 2021 · Figshare
  74. Additional file 1 of Noninvasive detection of pancreatic ductal adenocarcinoma using the methylation signature of circulating tumour DNA
    Wu, Huanwen, Guo, Shiwei, Liu, Xiaoding, Yatong Li, Su, Zhixi, He, Qiye, Liu, Xiaoqian, Zhang, Zhiwen, Lianyuan Yu, Shi, Xiaohan et al. · 2022 · Figshare
  75. Additional file 2 of NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
    Fu, Hailu, Zheng, Haizi, Chen, Xiaoting, Matthew T. Weirauch, Muglia, Louis J., Li Wang, Yaping Liu · 2024 · Figshare
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