Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

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  1. Additional file 10 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  2. Additional file 11 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
  3. Additional file 8 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  4. Additional file 1 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
    Xiang Zhu, Shining Ma, Wing Hung Wong · 2024 · Figshare
  5. Additional file 7 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  6. Additional file 4 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  7. Additional file 9 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
  8. Additional file 10 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  9. Additional file 12 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
  10. Additional file 7 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  11. Additional file 3 of Universal chromatin state annotation of the mouse genome
    Ha Vu, Jason Ernst · 2023 · Figshare
  12. Additional file 6 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  13. Additional file 8 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  14. Additional file 5 of Universal chromatin state annotation of the mouse genome
    Ha Vu, Jason Ernst · 2023 · Figshare
  15. Additional file 7 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
  16. Additional file 9 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  17. Additional file 6 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  18. Additional file 5 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  19. Additional file 2 of dbNSFP v4: a comprehensive database of transcript-specific functional predictions and annotations for human nonsynonymous and splice-site SNVs
    Xiaoming Liu, Chang Li, Chengcheng Mou, Yibo Dong, Yi-Cheng Tu · 2020 · Figshare
  20. Additional file 2 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  21. Additional file 13 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
  22. Additional file 11 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  23. Additional file 5 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  24. Additional file 2 of Epigenetic dynamics shaping melanophore and iridophore cell fate in zebrafish
    H. Josh Jang, Yujie Chen, Ge, Jiaxin, Alicia N. Wilkening, Yiran Hou, Hyung Joo Lee, You Rim Choi, Rebecca F. Lowdon, Xiaoyun Xing, Daofeng Li et al. · 2021 · Figshare
  25. Additional file 5 of Revealing the novel complexity of plant long non-coding RNA by strand-specific and whole transcriptome sequencing for evolutionarily representative plant species
    Yan Zhu, Longxian Chen, Xiangna Hong, Hanping Shi, Xuan Li · 2022 · Figshare
  26. Additional file 8 of Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
    Yu‐Chan Zhang, Yan-Fei Zhou, Yu Cheng, Jia-Hui Huang, Jian‐Ping Lian, Lu Yang, Rui-Rui He, Meng-Qi Lei, Yuwei Liu, Chao Yuan et al. · 2022 · Figshare
  27. Additional file 5 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  28. Additional file 3 of Revealing the novel complexity of plant long non-coding RNA by strand-specific and whole transcriptome sequencing for evolutionarily representative plant species
    Yan Zhu, Longxian Chen, Xiangna Hong, Hanping Shi, Xuan Li · 2022 · Figshare
  29. Additional file 7 of Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
    Stephanie Maria Linker, Lara Urban, Stephen J. Clark, Mariya Chhatriwala, Shradha Amatya, Davis James McCarthy, Ingo Ebersberger, Ludovic Vallier, Wolf Reik, Oliver Stegle et al. · 2020 · Figshare
  30. Additional file 13 of Genome-wide analysis of differentially expressed mRNAs, lncRNAs, and circRNAs in chicken bursae of Fabricius during infection with very virulent infectious bursal disease virus
    Xuewei Huang, Junyan Zhang, Zengsu Liu, Meng Wang, Xiaolong Fan, Li Wang, Han Zhou, Yanping Jiang, Wen Cui, Xinyuan Qiao et al. · 2020 · Figshare
  31. Additional file 4 of An unsupervised deep learning framework for predicting human essential genes from population and functional genomic data
    Troy M. LaPolice, Yi-Fei Huang · 2023 · Figshare
  32. Additional file 14 of Comparative genomics analyses reveal sequence determinants underlying interspecies variations in injury-responsive enhancers
    Luzhang Ji, Yuanyuan Shi, Qian Bian · 2023 · Figshare
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