Cited by 84

The DOI matches its Crossref record.

Extensive Conservation of Sex Chromosome Organization Between Cat and Human Revealed by Parallel Radiation Hybrid Mapping

Murphy, William J., Sun, Shan, Chen, Zhang-Qun, Pecon-Slattery, Jill, O'Brien, Stephen J.·1999·Genome Research

Abstract

A radiation hybrid (RH)-derived physical map of 25 markers on the feline X chromosome (including 19 Type I coding loci and 6 Type II microsatellite markers) was compared to homologous marker order on the human and mouse X chromosome maps. Complete conservation of synteny and marker order was observed between feline and human X chromosomes, whereas the same markers identified a minimum of seven rearranged syntenic segments between mouse and cat/human X chromosome marker order. Within the blocks, the feline, human, and mouse marker order was strongly conserved. Similarly, Y chromosome locus order was remarkably conserved between cat and human Y chromosomes, with only one marker (SMCY) position rearranged between the species. Tight linkage and a conserved gene order for a segment encoding three genes,DFFRY–DBY–UTY in human, mouse, and cat Y chromosomes, coupled with demonstrated deletion effects of these genes on reproductive impairment in both human and mouse, implicates the region as critical for Y-mediated sperm production. [The sequence data described in this paper have been submitted to the GenBank data library under accession numbers AF197956–AF197962 and AF197964–AF197972.]

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1101/gr.9.12.1223

Cites

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • The homomorphic X and Z chromosomes have remained surprisingly intact over the >100 M years of independent mammalian and avian evolution.

    “As such, we chose to focus on the homomorphic X and Z chromosomes, which have remained surprisingly intact over the >100 M years of independent mammalian (Murphy et al., 1999) and avian evolution (Zhou et al., 2014; Figure 2, Figure 2—figure supplement 1).”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 42

  1. Affara, 1996, Report on the second international workshop on Y chromosome mapping 1995., Cytogenet. Cell Genet., 73, 33, 10.1159/000134310 · DOI
  2. 10.1007/s004120050303 · DOI
  3. Boehnke, 1992, Multipoint analysis for radiation hybrid mapping., Ann. Med., 24, 383, 10.3109/07853899209147842 · DOI
  4. 10.1101/gr.7.12.1123 · DOI
  5. 10.1093/jhered/90.4.477 · DOI
  6. Cho, 1997, A proposed nomenclature of the domestic cat karyotype., Cytogenet. Cell. Genet., 79, 71, 10.1159/000134686 · DOI
  7. 10.1126/science.282.5389.744 · DOI
  8. 10.1007/s003359900926 · DOI
  9. 10.1093/hmg/7.11.1725 · DOI
  10. Glaser, 1997, Comparative mapping of Xp22 genes in hominoids—evolutionary linear instability of their Y homologues., Chrom. Res., 5, 167, 10.1023/A:1018490713273 · DOI
  11. 10.1002/bies.950170407 · DOI
  12. 10.1093/hmg/7.13.1991 · DOI
  13. 10.1093/hmg/5.3.339 · DOI
  14. Kumar, 1998, A molecular timescale for vertebrate evolution., Nature, 392, 917, 10.1038/31927 · DOI · Paper page
  15. 10.1159/000015032 · DOI
  16. 10.1126/science.278.5338.675 · DOI
  17. 10.1101/gr.5.2.136 · DOI
  18. 10.1038/ng0197-47 · DOI
  19. 10.1093/hmg/7.11.1713 · DOI
  20. 10.1101/gr.7.12.1153 · DOI
  21. 10.1101/gr.7.9.897 · DOI
  22. Menotti-Raymond, 1999, A genetic linkage map of microsatellites in the domestic cat (Felis catus)., Genomics, 53, 9, 10.1006/geno.1999.5743 · DOI
  23. Murphy, 1999, Development of a feline whole genome radiation hybrid panel and comparative mapping of human chromosome 12 and 22 loci., Genomics, 53, 1, 10.1006/geno.1998.5695 · DOI
  24. 10.1073/pnas.79.21.6631 · DOI
  25. 10.1146/annurev.ge.22.120188.001543 · DOI
  26. O'Brien, 1997, Comparative gene mapping in the domestic cat (Felis catus)., J. Hered., 88, 408, 10.1093/oxfordjournals.jhered.a023127 · DOI
  27. 10.1016/S0168-9525(97)01297-3 · DOI
  28. Ohno, 1973, Ancient linkage groups and frozen accidents., Nature, 244, 259, 10.1038/244259a0 · DOI
  29. Pecon-Slattery, 1998, Patterns of Y and X chromosome DNA sequence divergence during the Felidae radiation., Genetics, 148, 1245, 10.1093/genetics/148.3.1245 · DOI
  30. 10.1159/000015004 · DOI
  31. 10.1006/geno.1998.5602 · DOI
  32. Rettenberger, 1995, ZOO-FISH analysis: Cat and human karyotypes closely resemble the putative ancestral mammalian karyotype., Chrom. Res., 3, 479, 10.1007/BF00713962 · DOI
  33. 10.1159/000014976 · DOI
  34. 10.1006/geno.1996.0265 · DOI
  35. 10.1101/gr.7.5.422 · DOI
  36. Sutcliffe, 1989, Analysis of the testis of H-Y negative XOSxrb mice suggests that the spermatogenesis gene (Spy) acts during differentiation of the A spermatogonia., Development, 107, 373, 10.1242/dev.107.2.373 · DOI
  37. 10.1007/BF02399951 · DOI
  38. 10.1093/hmg/5.7.933 · DOI
  39. Wienberg, 1997, Conservation of human vs. feline genome organization revealed by reciprocal chromosome painting., Cytogenet. Cell Genet., 77, 211, 10.1159/000134579 · DOI
  40. 10.1006/geno.1996.0323 · DOI
  41. Yang, 1998, Parallel radiation hybrid mapping: A powerful tool for high-resolution genomic comparison., Genome Res., 8, 731, 10.1101/gr.8.7.731 · DOI
  42. Zhdanova, 1988, Subchromosomal localization and order of GLA, PGK1, HPRT, and G6PD loci on the X chromosome of the American mink (Mustela vison)., Cytogenet. Cell Genet., 48, 2, 10.1159/000132574 · DOI

Cited by

Sorted by citations

Metadata

Authors
Murphy, W. J., Sun, S., Chen, Z.-Q., Pecon-Slattery, J., & O'Brien, S. J.
Venue
Genome Research
Published
1999-12-01
Volume
9
Issue
12
Pages
1223-1230
ISSN
  • 1088-9051
  • 1549-5469
Cited by
84
References
0
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review