Cited by 32Fungal and yeast genetics researchCRISPR and Genetic EngineeringEvolution and Genetic Dynamics

Deep Mutational Scanning: A Highly Parallel Method to Measure the Effects of Mutation on Protein Function

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Starita, Lea M., Fields, Stanley·2015·Cold Spring Harbor Protocols

Abstract

Deep mutational scanning is a method that makes use of next-generation sequencing technology to measure in a single experiment the activity of 10 5 or more unique variants of a protein. Because of this depth of mutational coverage, this strategy provides data that can be analyzed to reveal many protein properties. Deep mutational scanning approaches are particularly amenable to being performed in Saccharomyces cerevisiae, given the extensive toolkit of reagents and technologies available for this organism.

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References 15 · Cited by 32

Authors
Starita, L. M., & Fields, S.
Affiliations
  • University of Washington (US)
  • Howard Hughes Medical Institute (US)
Venue
Cold Spring Harbor Protocols
Published
2015-08
Volume
2015
Issue
8
Pages
pdb.top077503
ISSN
  • 1559-6095 (ISSN-L)
  • 1940-3402
OpenAlex
W1943048093
Cited by
32
References
15
Citations by year
2026: 1 · 2025: 4 · 2024: 3 · 2023: 2 · 2022: 6 · 2021: 3 · 2020: 2 · 2019: 3 · 2018: 2 · 2017: 5 · 2015: 1
Type
posted content
Language
en
Open access
Locations
  • Cold Spring Harbor Protocols (publishedVersion)
  • PubMed (publishedVersion)
Funders
Howard Hughes Medical Institute
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › CRISPR and Genetic Engineering
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
Keywords
deep mutational scanning, protein variants, protein function, mutation effects, next-generation sequencing, Saccharomyces cerevisiae, protein properties
MeSH terms
DNA Mutational Analysis, Genetic Testing, Molecular Biology, Saccharomyces cerevisiae, Sequence Analysis, DNA, High-Throughput Screening Assays, High-Throughput Nucleotide Sequencing

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