The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Large-amplitude nonlinear motions in proteins
Abstract
A molecular-dynamics calculation on a hydrated protein, crambin, demonstrates that (i) neighboring dihedral angles are correlated to local transitions in the protein backbone, and that (ii) the amplitude of collective excitations, representing correlated global motions in the protein, samples multicentered distributions. The time dependence of the multicentered dihedral and collective excitations show rapid transitions from the center of one distribution to another, followed for some time by damped, low-amplitude motions around one center. The global nonlinear collective excitations are responsible for most of the atomic fluctuations of the molecule. An analysis appropriate to multimodal conformations is reported.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Protein states and proteinquakes.
Ansari, A., Berendzen, J., Bowne, S. F., Frauenfelder, H., Iben, I. E., Sauke, T. B., Shyamsunder, E., & Young, R. D. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.15.5000 · Cited by 828
Cited by
Trp-cage: Folding free energy landscape in explicit water
Zhou, R. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2233312100 · Cited by 363
Simplifying the representation of complex free-energy landscapes using sketch-map
Ceriotti, M., Tribello, G. A., & Parrinello, M. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1108486108 · Cited by 340
Das, P., Moll, M., Stamati, H., Kavraki, L. E., & Clementi, C. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0603553103 · Cited by 331
Multiplexed-Replica Exchange Molecular Dynamics Method for Protein Folding Simulation
Rhee, Y. M., & Pande, V. S. (2003) · Biophysical Journal · doi:10.1016/s0006-3495(03)74897-8 · Cited by 300
Rohrdanz, M. A., Zheng, W., & Clementi, C. (2013) · Annual Review of Physical Chemistry · doi:10.1146/annurev-physchem-040412-110006 · Cited by 242
Metadata
- Authors
- García, A. E.
- Venue
- Physical Review Letters
- Publisher
- American Physical Society (APS)
- Published
- 1992-04-27
- Volume
- 68
- Issue
- 17
- Pages
- 2696-2699
- ISSN
- 0031-9007 (ISSN-L)
- OpenAlex
- W2001773296
- Cited by
- 787
- References
- 1
- FWCI
- 2.29
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Large-amplitude nonlinear motions in proteins. https://app.cochat.ai/papers/10.1103/physrevlett.68.2696
- The paper
- García, A. E. (1992). Large-amplitude nonlinear motions in proteins. Physical Review Letters. https://doi.org/10.1103/physrevlett.68.2696
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
