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Unzipping Kinetics of Double-Stranded DNA in a Nanopore
Open accessAbstract
We studied the unzipping of single molecules of double-stranded DNA by pulling one of their two strands through a narrow protein pore. Polymerase chain reaction analysis yielded the first direct proof of DNA unzipping in such a system. The time to unzip each molecule was inferred from the ionic current signature of DNA traversal. The distribution of times to unzip under various experimental conditions fit a simple kinetic model. Using this model, we estimated the enthalpy barriers to unzipping and the effective charge of a nucleotide in the pore, which was considerably smaller than previously assumed.
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Cited by
Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore
Stoddart, D., Heron, A. J., Mikhailova, E., Maglia, G., & Bayley, H. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0901054106 · Cited by 482
(2007) · Cited by 33
Metadata
- Authors
- Sauer-Budge, A. F., Nyamwanda, J. A., Lubensky, D. K., & Branton, D.
- Venue
- Physical Review Letters
- Publisher
- American Physical Society (APS)
- Published
- 2003-06-09
- Volume
- 90
- Issue
- 23
- Pages
- 238101-238101
- ISSN
- 0031-9007 (ISSN-L)
- 1079-7114
- OpenAlex
- W2073975746
- Cited by
- 312
- References
- 0
- FWCI
- 12.55
- Type
- journal article
- Language
- en
- Open access
- green
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- Sauer-Budge, A. F., Nyamwanda, J. A., Lubensky, D. K., & Branton, D. (2003). Unzipping Kinetics of Double-Stranded DNA in a Nanopore. Physical Review Letters. https://doi.org/10.1103/physrevlett.90.238101
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