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Cited by 216

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Analysis of Natural Allelic Variation of Arabidopsis Seed Germination and Seed Longevity Traits between the Accessions Landsberg erecta and Shakdara, Using a New Recombinant Inbred Line Population

Open access
Clerkx, Emile J.M., El-Lithy, Mohamed E., Vierling, Elizabeth, Ruys, Gerda J., Blankestijn-De Vries, Hetty, Groot, Steven P.C., Vreugdenhil, Dick, Koornneef, Maarten·2004·Plant Physiology

Abstract

Quantitative trait loci (QTL) mapping was used to identify loci controlling various aspects of seed longevity during storage and germination. Similar locations for QTLs controlling different traits might be an indication for a common genetic control of such traits. For this analysis we used a new recombinant inbred line population derived from a cross between the accessions Landsberg erecta (Ler) and Shakdara (Sha). A set of 114 F9 recombinant inbred lines was genotyped with 65 polymerase chain reaction-based markers and the phenotypic marker erecta. The traits analyzed were dormancy, speed of germination, seed sugar content, seed germination after a controlled deterioration test, hydrogen peroxide (H2O2) treatment, and on abscisic acid. Furthermore, the effects of heat stress, salt (NaCl) stress, osmotic (mannitol) stress, and natural aging were analyzed. For all traits one or more QTLs were identified, with some QTLs for different traits colocating. The relevance of colocation for mechanisms underlying the various traits is discussed.

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Crossref · 10.1104/pp.103.036814

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Metadata

Authors
Clerkx, E. J. M., El-Lithy, M. E., Vierling, E., Ruys, G. J., Blankestijn-De Vries, H., Groot, S. P. C., Vreugdenhil, D., & Koornneef, M.
Venue
Plant Physiology
Published
2004-05-01
Volume
135
Issue
1
Pages
432-443
ISSN
  • 0032-0889 (ISSN-L)
  • 1532-2548
OpenAlex
W2070903657
Cited by
216
References
1
FWCI
13.87
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: Analysis of Natural Allelic Variation of Arabidopsis Seed Germination and Seed Longevity Traits between the Accessions Landsberg erecta and Shakdara, Using a New Recombinant Inbred Line Population. https://app.cochat.ai/papers/10.1104/pp.103.036814
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Clerkx, E. J. M., El-Lithy, M. E., Vierling, E., Ruys, G. J., Blankestijn-De Vries, H., Groot, S. P. C., Vreugdenhil, D., & Koornneef, M. (2004). Analysis of Natural Allelic Variation of Arabidopsis Seed Germination and Seed Longevity Traits between the Accessions Landsberg erecta and Shakdara, Using a New Recombinant Inbred Line Population. Plant Physiology. https://doi.org/10.1104/pp.103.036814

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