The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
CrystFEL: a software suite for snapshot serial crystallography
Open accessAbstract
In order to address the specific needs of the emerging technique of `serial femtosecond crystallography', in which structural information is obtained from small crystals illuminated by an X-ray free-electron laser, a new software suite has been created. The constituent programs deal with viewing, indexing, integrating, merging and evaluating the quality of the data, and also simulating patterns. The specific challenges addressed chiefly concern the indexing and integration of large numbers of diffraction patterns in an automated manner, and so the software is designed to be fast and to make use of multi-core hardware. Other constituent programs deal with the merging and scaling of large numbers of intensities from randomly oriented snapshot diffraction patterns. The suite uses a generalized representation of a detector to ease the use of more complicated geometries than those familiar in conventional crystallography. The suite is written in C with supporting Perl and shell scripts, and is available as source code under version 3 or later of the GNU General Public License.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
[20] Processing of X-ray diffraction data collected in oscillation mode
Otwinowski, Z., & Minor, W. (1997) · Methods in Enzymology · doi:10.1016/s0076-6879(97)76066-x · Cited by 33,475
Kabsch, W. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909047337 · Cited by 16,463
Overview of the CCP 4 suite and current developments
Winn, M. D., Ballard, C. C., Cowtan, K. D., Dodson, E. J., Emsley, P., Evans, P. R., Keegan, R. M., Krissinel, E. B., Leslie, A. G. W., McCoy, A., et al. (2011) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444910045749 · Cited by 12,353
Cited by
Tenboer, J., Basu, S., Zatsepin, N., Pande, K., Milathianaki, D., Frank, M., Hunter, M., Boutet, S., Williams, G. J., Koglin, J. E., et al. (2014) · Science · doi:10.1126/science.1259357 · Cited by 508
Self-citationNatively Inhibited Trypanosoma brucei Cathepsin B Structure Determined by Using an X-ray Laser
Redecke, L., Nass, K., DePonte, D. P., White, T. A., Rehders, D., Barty, A., Stellato, F., Liang, M., Barends, T. R. M., Boutet, S., et al. (2013) · Science · doi:10.1126/science.1229663 · Cited by 440
Self-citationIndications of radiation damage in ferredoxin microcrystals using high-intensity X-FEL beams
Nass, K., Foucar, L., Barends, T. R. M., Hartmann, E., Botha, S., Shoeman, R. L., Doak, R. B., Alonso-Mori, R., Aquila, A., Bajt, S., et al. (2015) · Journal of Synchrotron Radiation · doi:10.1107/s1600577515002349 · Cited by 131
Self-citationWatching proteins function with time-resolved x-ray crystallography
Šrajer, V., & Schmidt, M. (2017) · Journal of Physics D: Applied Physics · doi:10.1088/1361-6463/aa7d32 · Cited by 67
Tetreau, G., Sawaya, M. R., De Zitter, E., Andreeva, E. A., Banneville, A.-S., Schibrowsky, N. A., Coquelle, N., Brewster, A. S., Grünbein, M. L., Kovacs, G. N., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-31746-x · Cited by 28
Metadata
- Authors
- White, T. A., Kirian, R. A., Martin, A. V., Aquila, A., Nass, K., Barty, A., & Chapman, H. N.
- Venue
- Journal of Applied Crystallography
- Published
- 2012-03-15
- Volume
- 45
- Issue
- 2
- Pages
- 335-341
- ISSN
- 0021-8898 (ISSN-L)
- OpenAlex
- W1987587134
- Cited by
- 535
- References
- 3
- FWCI
- 15.35
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: CrystFEL: a software suite for snapshot serial crystallography. https://app.cochat.ai/papers/10.1107/s0021889812002312
- The paper
- White, T. A., Kirian, R. A., Martin, A. V., Aquila, A., Nass, K., Barty, A., & Chapman, H. N. (2012). CrystFEL: a software suite for snapshot serial crystallography. Journal of Applied Crystallography. https://doi.org/10.1107/s0021889812002312
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
