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popart: full‐feature software for haplotype network construction

Open access
Leigh, Jessica W., Bryant, David·2015·Methods in Ecology and Evolution

Abstract

Summary: Haplotype networks are an intuitive method for visualising relationships between individual genotypes at the population level. Here, we present popart, an integrated software package that provides a comprehensive implementation of haplotype network methods, phylogeographic visualisation tools and standard statistical tests, together with publication‐ready figure production. popart also provides a platform for the implementation and distribution of new network‐based methods – we describe one such new method, integer neighbour‐joining. The software is open source and freely available for all major operating systems.

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Metadata

Authors
Leigh, J. W., & Bryant, D.
Venue
Methods in Ecology and Evolution
Publisher
Wiley
Published
2015-07
Volume
6
Issue
9
Pages
1110-1116
ISSN
2041-210X (ISSN-L)
OpenAlex
W1946252112
Cited by
6,707
References
4
FWCI
115.34
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: popart: full‐feature software for haplotype network construction. https://app.cochat.ai/papers/10.1111/2041-210x.12410
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Leigh, J. W., & Bryant, D. (2015). popart: full‐feature software for haplotype network construction. Methods in Ecology and Evolution. https://doi.org/10.1111/2041-210x.12410

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Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.