The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next‐generation DNA sequencing
Open accessAbstract
Biological monitoring has failed to develop from simple binary assessment outcomes of the impacted/unimpacted type, towards more diagnostic frameworks, despite significant scientific effort over the past fifty years. It is our assertion that this is largely because of the limited information content of biological samples processed by traditional morphology‐based taxonomy, which is a slow, imprecise process, focused on restricted groups of organisms. We envision a new paradigm in ecosystem assessment, which we refer to as ‘Biomonitoring 2.0’. This new schema employs DNA‐based identification of taxa, coupled with high‐throughput DNA sequencing on next‐generation sequencing platforms. We discuss the transformational nature of DNA‐based approaches in biodiversity discovery and ecosystem assessment and outline a path forward for their future widespread application.
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Cites
Human gut microbes associated with obesity
Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785
Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems
Zinger, L., Amaral-Zettler, L. A., Fuhrman, J. A., Horner-Devine, M. C., Huse, S. M., Welch, D. B. M., Martiny, J. B. H., Sogin, M., Boetius, A., & Ramette, A. (2011) · PLoS ONE · doi:10.1371/journal.pone.0024570 · Cited by 643 · cited 1×
“Until recently, this technology had largely been applied to the issue of exploring microbial diversity (e.g. Sogin et al. 2006; Zinger et al. 2011), where traditional taxonomic approaches have limited application.”
Hajibabaei, M., Shokralla, S., Zhou, X., Singer, G. A. C., & Baird, D. J. (2011) · PLoS ONE · doi:10.1371/journal.pone.0017497 · Cited by 584
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Cited by
Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity
Thomsen, P. F., & Willerslev, E. (2015) · Biological Conservation · doi:10.1016/j.biocon.2014.11.019 · Cited by 2,082
Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding
Ji, Y., Ashton, L., Pedley, S. M., Edwards, D. P., Tang, Y., Nakamura, A., Kitching, R., Dolman, P. M., Woodcock, P., Edwards, F. A., et al. (2013) · Ecology Letters · doi:10.1111/ele.12162 · Cited by 662
Comparing bioinformatic pipelines for microbial 16S rRNA amplicon sequencing
Prodan, A., Tremaroli, V., Brolin, H., Zwinderman, A. H., Nieuwdorp, M., & Levin, E. (2020) · PLOS ONE · doi:10.1371/journal.pone.0227434 · Cited by 462
Elbrecht, V., Vamos, E. E., Meissner, K., Aroviita, J., & Leese, F. (2017) · Methods in Ecology and Evolution · doi:10.1111/2041-210x.12789 · Cited by 385
Carew, M. E., Pettigrove, V. J., Metzeling, L., & Hoffmann, A. A. (2013) · Frontiers in Zoology · doi:10.1186/1742-9994-10-45 · Cited by 243
A global agenda for advancing freshwater biodiversity research
Maasri, A., Jähnig, S. C., Adamescu, M. C., Adrian, R., Baigun, C., Baird, D. J., Batista‐Morales, A., Bonada, N., Brown, L. E., Cai, Q., et al. (2022) · Ecology Letters · doi:10.1111/ele.13931 · Cited by 227
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Metadata
- Authors
- BAIRD, D. J., & HAJIBABAEI, M.
- Venue
- Molecular Ecology
- Publisher
- Wiley
- Published
- 2012-03-16
- Volume
- 21
- Issue
- 8
- Pages
- 2039-2044
- ISSN
- 0962-1083 (ISSN-L)
- 1365-294X
- OpenAlex
- W1585980954
- Cited by
- 502
- References
- 3
- FWCI
- 16.14
- Type
- journal article
- Language
- en
- Open access
- bronze
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