Molecular subtyping of Alzheimer’s disease using RNA sequencing data reveals novel mechanisms and targets
Neff, Ryan A., Wang, Minghui, Vatansever, Sezen, Guo, Lei, Ming, Chen, Wang, Qian, Wang, Erming, Horgusluoglu-Moloch, Emrin +16 more·2021·Science Advances
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- Transcriptomic changes highly similar to Alzheimer’s disease are observed in a subpopulation of individuals during normal brain agingShouneng Peng, Lu Zeng, Jean-vianney Haure-mirande, Minghui Wang, Derek M. Huffman, Vahram Haroutunian, Michelle E. Ehrlich, Bin Zhang, Zhidong Tu · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Multi-‘Omic Integration via Similarity Network Fusion to Detect Molecular Subtypes of AgingMu Yang, Stuart A Matan‐Lithwick, Yanling Wang, Philip L. De Jager, David Alan Bennett, Daniel Felsky · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Machine-learning based strategy identifies a robust protein biomarker panel for Alzheimer’s disease in cerebrospinal fluidXiaosen Hou, Zhenzhen Quan, Ailikemu Aierken · 2023 · Research Square
- The Hippocampal Glutamate/GABA System is Affected by Aging but not by an Alzheimer’s Disease-Like Pathology in RatsAlena O. Burnyasheva, Natalia A. Stefanova, Nataliya G. Kolosova, Darya V. Telegina · 2023 · Research Square
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- Human brain aging heterogeneity observed from multi-region omics data reveals a subtype closely related to Alzheimer’s diseasePeng, Shouneng, Wang, Erming, Wang, Minghui, Wang, Xusheng, Yu, Kaiwen, Fu, Yingxue, Poudel, Suresh, Ho, Lap, Narayan, Sushma, Huffman, Derek M. et al. · 2024
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- Transcriptome Meta-Analysis Suggests the Existence of Two Molecular Subtypes in Alzheimer’s DiseaseAnahita Nazari, Sayed‐Amir Marashi, Hesam Montazeri · 2021 · Research Square
- The Role of Microglial-Triggering Receptor Expressed on Myeloid Cells 2 (TREM2) in Neuronal Homeostasis and Tau PathogenesisVaishnavi Jadhav · 2021 · IUScholarWorks (Indiana University)
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- Transcriptional landscape of human microglia reveals robust gene expression signatures that implicates age, sex and APOE -related immunometabolic pathway perturbationsTulsi Patel, Troy Carnwath, Xue Wang, Mariet Allen, Sarah Lincoln, Laura J. Lewis‐Tuffin, Zachary Quicksall, Shu Lin, Frederick Q Tutor‐New, Charlotte C.G. Ho et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
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- Brain cross-omics integration in Alzheimer’s diseaseAbdallah M. Eteleeb, Brenna C. Novotny, Carolina Soriano‐Tárraga, Christopher Sohn, Eliza Dhungel, Logan Brase, Aasritha Nallapu, Jared Buss, Fabiana Farias, Kristy Bergmann et al. · 2022 · medRxiv
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- Additional file 6 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 5 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 2 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 4 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 3 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Changes in the glutamate/gaba system in the hippocampus of rats with age and during the Alzheimer’s disease signs developmentAlena O. Burnyasheva, Natalia A. Stefanova, Nataliya G. Kolosova, Darya V. Telegina · 2023 · Biochemistry (Moscow)
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- Additional file 2 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 4 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 8 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 11 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 1 of Preclinical translational platform of neuroinflammatory disease biology relevant to neurodegenerative diseaseKelley C. Larson, Lauren Herl Martens, Marconi, Michael, Christopher Dejesus, Suzanne Bruhn, Thomas A. Miller, Barbara A. Tate, Jonathan M. Levenson · 2024 · Figshare
- Additional file 6 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 3 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivityElizabeth E. Evans, Mishra, Vikas, Crystal L. Mallow, Elaine M. Gersz, Leslie Balch, Alan P. Howell, Christine A. Reilly, Ernest Smith, Terrence Lee Fisher, Maurice Zauderer · 2022 · Figshare
- Additional file 10 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 2 of Preclinical translational platform of neuroinflammatory disease biology relevant to neurodegenerative diseaseKelley C. Larson, Lauren Herl Martens, Marconi, Michael, Christopher Dejesus, Suzanne Bruhn, Thomas A. Miller, Barbara A. Tate, Jonathan M. Levenson · 2024 · Figshare
- Additional file 8 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 1 of Modulation of C5a–C5aR1 signaling alters the dynamics of AD progressionKlébea Carvalho, Nicole D. Schartz, Gabriela Balderrama-Gutierrez, Liang, Heidi Y., Chu, Shu-Hui, Purnika Selvan, Ángela Gómez-Arboledas, Tiffany J. Petrisko, Fonseca, Maria I., Mortazavi, Ali et al. · 2022 · Figshare
- Additional file 5 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 9 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 4 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivityElizabeth E. Evans, Mishra, Vikas, Crystal L. Mallow, Elaine M. Gersz, Leslie Balch, Alan P. Howell, Christine A. Reilly, Ernest Smith, Terrence Lee Fisher, Maurice Zauderer · 2022 · Figshare
- Additional file 1 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 1 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
- Additional file 9 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 3 of Preclinical translational platform of neuroinflammatory disease biology relevant to neurodegenerative diseaseKelley C. Larson, Lauren Herl Martens, Marconi, Michael, Christopher Dejesus, Suzanne Bruhn, Thomas A. Miller, Barbara A. Tate, Jonathan M. Levenson · 2024 · Figshare
- Additional file 7 of Proteomic analysis across patient iPSC-based models and human post-mortem hippocampal tissue reveals early cellular dysfunction and progression of Alzheimer’s disease pathogenesisYuriy Pomeshchik, Erika Velásquez, Jeovanis Gil, Oxana l. Klementieva, Ritha Gidlöf, Marie Sydoff, Silvia Bagnoli, Benedetta Nacmias, Sandro Sorbi, Gunilla Westergren‐Thorsson et al. · 2023 · Figshare
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- Additional file 12 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 3 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 4 of Preclinical translational platform of neuroinflammatory disease biology relevant to neurodegenerative diseaseKelley C. Larson, Lauren Herl Martens, Marconi, Michael, Christopher Dejesus, Suzanne Bruhn, Thomas A. Miller, Barbara A. Tate, Jonathan M. Levenson · 2024 · Figshare
- Additional file 7 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
- Additional file 2 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivityElizabeth E. Evans, Mishra, Vikas, Crystal L. Mallow, Elaine M. Gersz, Leslie Balch, Alan P. Howell, Christine A. Reilly, Ernest Smith, Terrence Lee Fisher, Maurice Zauderer · 2022 · Figshare
- Additional file 1 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivityElizabeth E. Evans, Mishra, Vikas, Crystal L. Mallow, Elaine M. Gersz, Leslie Balch, Alan P. Howell, Christine A. Reilly, Ernest Smith, Terrence Lee Fisher, Maurice Zauderer · 2022 · Figshare
- Additional file 13 of Age, sex and Alzheimer’s disease: a longitudinal study of 3xTg-AD mice reveals sex-specific disease trajectories and inflammatory responses mirrored in postmortem brains from Alzheimer’s patientsAlicia J. Barber, Carmen L. del Genio, Anna Beth Swain, Elizabeth M. Pizzi, Sarah C. Watson, Vedant N. Tapiavala, George J. Zanazzi, Arti B Gaur · 2024 · Figshare
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