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The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains
Abstract
The chromosomal position of human genes is rapidly being established. We integrated these mapping data with genome-wide messenger RNA expression profiles as provided by SAGE (serial analysis of gene expression). Over 2.45 million SAGE transcript tags, including 160,000 tags of neuroblastomas, are presently known for 12 tissue types. We developed algorithms to assign these tags to UniGene clusters and their chromosomal position. The resulting Human Transcriptome Map generates gene expression profiles for any chromosomal region in 12 normal and pathologic tissue types. The map reveals a clustering of highly expressed genes to specific chromosomal regions. It provides a tool to search for genes that are overexpressed or silenced in cancer.
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Cited by
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Histone deacetylases (HDACs): characterization of the classical HDAC family
RUIJTER, A. J. M. D., GENNIP, A. H. V., CARON, H. N., KEMP, S., & KUILENBURG, A. B. P. V. (2003) · Biochemical Journal · doi:10.1042/bj20021321 · Cited by 3,114
Self-citationSpatial partitioning of the regulatory landscape of the X-inactivation centre
Nora, E. P., Lajoie, B. R., Schulz, E. G., Giorgetti, L., Okamoto, I., Servant, N., Piolot, T., van Berkum, N. L., Meisig, J., Sedat, J., et al. (2012) · Nature · doi:10.1038/nature11049 · Cited by 2,895
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Genetic analysis of genome-wide variation in human gene expression
Morley, M., Molony, C. M., Weber, T. M., Devlin, J. L., Ewens, K. G., Spielman, R. S., & Cheung, V. G. (2004) · Nature · doi:10.1038/nature02797 · Cited by 1,207
Metadata
- Authors
- Caron, H., Schaik, B. V., Mee, M. V. D., Baas, F., Riggins, G., Sluis, P. V., Hermus, M.-C., Asperen, R. V., Boon, K., Voûte, P. A., Heisterkamp, S., Kampen, A. V., & Versteeg, R.
- Venue
- Science
- Published
- 2001-02-16
- Volume
- 291
- Issue
- 5507
- Pages
- 1289-1292
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2102999073
- Cited by
- 731
- References
- 0
- FWCI
- 23.56
- Type
- journal article
- Language
- en
- Open access
- closed
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- CoChat. (2026). Citation check: The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains. https://app.cochat.ai/papers/10.1126/science.1056794
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- Caron, H., Schaik, B. V., Mee, M. V. D., Baas, F., Riggins, G., Sluis, P. V., Hermus, M.-C., Asperen, R. V., Boon, K., Voûte, P. A., Heisterkamp, S., Kampen, A. V., & Versteeg, R. (2001). The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains. Science. https://doi.org/10.1126/science.1056794
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