Miniature Genome in the Marine Chordate Oikopleura dioica
Abstract
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Oikopleura dioica has a highly compacted genome and extensive rearrangements that led to a loss of macrosynteny relative to other chordates.
“the free-swimming marine invertebrate chordate Oikopleura dioica has a highly compacted genome and extensive rearrangements that led to a loss of macrosynteny relative to other chordates (163, 164).”
From Topological Approaches in Animal Comparative Genomics (2026) · cites this paper as [163]
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The Draft Genome of <i>Ciona intestinalis</i> : Insights into Chordate and Vertebrate Origins
Dehal, P., Satou, Y., Campbell, R. K., Chapman, J., Degnan, B., De Tomaso, A., Davidson, B., Di Gregorio, A., Gelpke, M., Goodstein, D. M., et al. (2002) · Science · doi:10.1126/science.1080049 · Cited by 1,641 · see citing works
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans
King, N., Westbrook, M. J., Young, S. L., Kuo, A., Abedin, M., Chapman, J., Fairclough, S., Hellsten, U., Isogai, Y., Letunic, I., et al. (2008) · Nature · doi:10.1038/nature06617 · Cited by 1,139 · see citing works
Topological Approaches in Animal Comparative Genomics
Schultz, D. T., & Simakov, O. (2026) · Annual Review of Animal Biosciences · doi:10.1146/annurev-animal-030424-084541 · Cited by 1 · see citing works
- Authors
- Seo, H.-C., Kube, M., Edvardsen, R. B., Jensen, M. F., Beck, A., Spriet, E., Gorsky, G., Thompson, E. M., Lehrach, H., Reinhardt, R., & Chourrout, D.
- Affiliations
- Sara Centre for Marine Molecular Biology, Thormø- hlensgt. 55, 5020 Bergen, Norway.
- Max Planck Institute for Molecular Genetics (DE)
- Centre National de la Recherche Scientifique (FR)
- Corresponding author
- Kube, Michael
- Edvardsen, Rolf B.
- Chourrout, Daniel
- ORCID
- Venue
- Science
- Published
- 2001-12-21
- Volume
- 294
- Issue
- 5551
- Pages
- 2506-2506
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2158150300
- Cited by
- 164
- References
- 0
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 3 · 2023: 5 · 2022: 2 · 2021: 8 · 2020: 9 · 2019: 4 · 2018: 6 · 2017: 4 · 2016: 8 · 2015: 8 · 2014: 4 · 2013: 4 · 2012: 6
- FWCI
- 8.65
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Chromosomal and Genetic Variations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Keywords
- Oikopleura dioica, genome size, genome reduction, tunicates
- MeSH terms
- Animals, Ciona intestinalis, Cloning, Molecular, Genes, Introns, Male, Repetitive Sequences, Nucleic Acid, Spermatozoa, Urochordata, Genome, Sequence Analysis, DNA, DNA, Complementary, Expressed Sequence Tags, DNA, Intergenic, Chromosomes, Artificial, Bacterial
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