Network motifs: simple building blocks of complex networks.
Abstract
Complex networks are studied across many fields of science. To uncover their structural design principles, we defined "network motifs," patterns of interconnections occurring in complex networks at numbers that are significantly higher than those in randomized networks. We found such motifs in networks from biochemistry, neurobiology, ecology, and engineering. The motifs shared by ecological food webs were distinct from the motifs shared by the genetic networks of Escherichia coli and Saccharomyces cerevisiae or from those found in the World Wide Web. Similar motifs were found in networks that perform information processing, even though they describe elements as different as biomolecules within a cell and synaptic connections between neurons in Caenorhabditis elegans. Motifs may thus define universal classes of networks. This approach may uncover the basic building blocks of most networks.
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There has been extensive work in systems biology to identify network motifs.
“There has been extensive work in the field of systems biology to identify network motifs [16], [17].”
From A Model for How Signal Duration Can Determine Distinct Outcomes of Gene Transcription Programs (2012) · cites this paper as [17]
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References 25 · Cited by 7,368
- Authors
- Milo, R., Shen-Orr, S., Itzkovitz, S., Kashtan, N., Chklovskii, D., & Alon, U.
- Affiliations
- Weizmann Institute of Science (IL)
- Cold Spring Harbor Laboratory (US)
- Corresponding author
- Alon, U.
- Venue
- Science
- Published
- 2002-10-25
- Volume
- 298
- Issue
- 5594
- Pages
- 824-827
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2153624566
- Cited by
- 7,368
- References
- 25
- Citations by year
- 2026: 271 · 2025: 295 · 2024: 302 · 2023: 298 · 2022: 366 · 2021: 373 · 2020: 380 · 2019: 374 · 2018: 406 · 2017: 353 · 2016: 337 · 2015: 336 · 2014: 366 · 2013: 349 · 2012: 383
- FWCI
- 76.78
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory) (acceptedVersion)
- Topics
- Physical Sciences › Physics and Astronomy › Statistical and Nonlinear Physics › Complex Network Analysis Techniques
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bioinformatics and Genomic Networks
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gene Regulatory Network Analysis
- Keywords
- network motifs, complex networks, network topology, structural design principles, food webs, gene regulatory networks, Escherichia coli, Saccharomyces cerevisiae, World Wide Web, synaptic connectivity, Caenorhabditis elegans, biomolecules
- MeSH terms
- Algorithms, Animals, Electronics, Escherichia coli, Gene Expression Regulation, Nerve Net, Neurons, Saccharomyces cerevisiae, Synapses, Caenorhabditis elegans, Food Chain, Internet
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