Gut microbiome heritability is nearly universal but environmentally contingent

Grieneisen, Laura, Dasari, Mauna, Gould, Trevor J., Björk, Johannes R., Grenier, Jean-Christophe, Yotova, Vania, Jansen, David, Gottel, Neil +13 more·2021·Science
DOI 10.1126/science.aba5483

Cited by (257)

Items 201–257 of 257

  1. The manifestations and interdependence of social and physiological aging in wild female Assamese macaques (Macaca assamensis)
    Baptiste Sadoughi · 2023
  2. Additional file 2 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    Zhengxiao He, Ranran Liu, Mengjie Wang, Wang, Qiao, Jumei Zheng, Jiqiang Ding, Jie Wen, Alan G. Fahey, Guiping Zhao · 2023 · Figshare
  3. Additional file 13 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    Zhengxiao He, Ranran Liu, Mengjie Wang, Wang, Qiao, Jumei Zheng, Jiqiang Ding, Jie Wen, Alan G. Fahey, Guiping Zhao · 2023 · Figshare
  4. Additional file 1 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    Zhengxiao He, Ranran Liu, Mengjie Wang, Wang, Qiao, Jumei Zheng, Jiqiang Ding, Jie Wen, Alan G. Fahey, Guiping Zhao · 2023 · Figshare
  5. Additional file 14 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    Zhengxiao He, Ranran Liu, Mengjie Wang, Wang, Qiao, Jumei Zheng, Jiqiang Ding, Jie Wen, Alan G. Fahey, Guiping Zhao · 2023 · Figshare
  6. Unlocking the Secrets of Soil: Exploring the Microbiome and Its Applications—Part 2
    Om Prakash Ghimire, Jaya Nepal, Pratima Poudel, Suraj Powar · 2024 · CSA News
  7. Spotted hyena gut cross-talks: Symbionts modulate mucosal immunity
    Susana P Veloso Soares, Víctor Hugo Jarquín‐Díaz, Miguel Mendes Veiga, Stephan Karl, Gábor Á. Czirják, Alexandra Weyrich, Sonja Metzger, Marion L. East, Heribert Hofer, Emanuel G Heitlinger et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  8. Gut–brain communication through microbes
    Miranda Green, Jane Allyson Foster · 2024 · Elsevier eBooks
  9. Quantitative Genetics in Natural Populations
    Alastair James Wilson, Jocelyn Poissant · 2024 · Elsevier eBooks
  10. Novel Insights into the Human Microbiome and Its Functions
    Birbal Singh, Gorakh Mal, Rajkumar Singh Kalra, Francesco Marotta · 2024 · Springer eBooks
  11. Baboons, bacteria, and biological clocks address an age-old question
    Amanda Dawn Melin · 2024 · eLife
  12. Gut microbial composition and diversity varies by CREBRF genotype among Samoan infants
    Sakura Oyama, Kendall J. Arslanian, Maria Luisa Savo Sardaro, Rachel L. Duckham, Erin E. Kershaw, Ashlee N. Wood, Ulai T. Fidow, Take K. Naseri, Muagututi‘a Sefuiva Reupena, Katherine Ryan Amato et al. · 2025 · Physiological Genomics
  13. Fecal proteomics of wild capuchins reveals impacts of season, diet, age, and, sex on gut physiology
    Joseph Daniel Orkin, Alice Fournier, Daniel W Young, Shasta E. Webb, Saúl Cheves Hernández, Katharine M. Jack, Fernando A. Campos, Antoine Dufour, Amanda Dawn Melin · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  14. Age-related changes in the gut microbiota of a long-lived seabird suggest divergence from mammalian models
    Eveliina Hanski, Kieran A. Bates, Robert D. Hughes, Mark A. Newell, Alex Penn, Aura Raulo, Liz Scott, Liping Tang, Annette L. Fayet · 2026 · Royal Society Open Science
  15. HoloSimR: a comprehensive framework for simulating breeding programs including the hologenome scenario
    Cristina Casto‐Rebollo, Ivan Pocrnić, Gregor Gorjanc, Noelia Ibáñez‐Escriche · 2025 · Journal of Animal Science
  16. HLA‐C ∗ 0304 Associates With Beneficial Gut Microbiota and Later Onset of Type 1 Diabetes in Pediatric Cohorts
    Zhenran Xu, Xiaojing Li, Xiaoxiao Yuan, Chengjun Sun, Miaoying Zhang, Ruimin Chen, Haiyan Wei, Linqi Chen, Hongwei Du, Guimei Li et al. · 2025 · Pediatric Diabetes
  17. Additional file 1 of Comparing the gut microbiota of Sichuan golden monkeys across multiple captive and wild settings: roles of anthropogenic activities and host factors
    Xuanzhen Liu, Yu, Jianqiu, Huan, Zongjin, Xu, Mei, Song, Ting, Yang, Ruilin, Zhu, Wei, Jiang, Jianping · 2024 · Figshare
  18. Additional file 7 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  19. Additional file 5 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  20. Additional file 2 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  21. Additional file 3 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  22. Additional file 11 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  23. Additional file 2 of Comparing the gut microbiota of Sichuan golden monkeys across multiple captive and wild settings: roles of anthropogenic activities and host factors
    Xuanzhen Liu, Yu, Jianqiu, Huan, Zongjin, Xu, Mei, Song, Ting, Yang, Ruilin, Zhu, Wei, Jiang, Jianping · 2024 · Figshare
  24. Additional file 9 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  25. Additional file 1 of Heritability and recursive influence of host genetics on the rumen microbiota drive body weight variance in male Hu sheep lambs
    Wang, Weimin, Zhang, Yukun, Zhang, Xiaoxue, Chong Li, Yuan, Lvfeng, Deyin Zhang, Zhao, Yuan, Li, Xiaolong, Cheng, Jiangbo, Lin, Changchun et al. · 2024 · Figshare
  26. Additional file 6 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  27. Additional file 2 of Aging gut microbiota of wild macaques are equally diverse, less stable, but progressively personalized
    Baptiste Sadoughi, Dominik Schneider, Rolf Daniel, Oliver Schülke, Julia Ostner · 2022 · Figshare
  28. Additional file 10 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Jie Wen, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  29. Additional file 12 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  30. Additional file 9 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  31. Additional file 7 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  32. Additional file 5 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Jie Wen, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  33. Additional file 6 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  34. Additional file 4 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  35. Additional file 3 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  36. Additional file 5 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  37. Additional file 1 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  38. Additional file 2 of Drivers of gut microbiome variation within and between groups of a wild Malagasy primate
    Katja Rudolph, Dominik Schneider, Claudia Fichtel, Rolf Daniel, Michael Heistermann, Peter M. Kappeler · 2022 · Figshare
  39. Additional file 1 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  40. Additional file 8 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  41. Additional file 4 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  42. Additional file 7 of Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude
    Yang Han, Liu, Xiaoshuang, Jia, Qian, Xu, Jiayu, Shi, Jinlong, Li, Xiang, Xie, Guotong, Zhao, Xiaojing, He, Kunlun · 2024 · Figshare
  43. Additional file 6 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Jie Wen, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  44. Additional file 3 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  45. Additional file 15 of Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens
    He, Zhengxiao, Liu, Ranran, Wang, Mengjie, Wang, Qiao, Jumei Zheng, Ding, Jiqiang, Wen, Jie, Alan G. Fahey, Zhao, Guiping · 2023 · Figshare
  46. Additional file 2 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  47. Additional file 4 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  48. Additional file 8 of Selection for environmental variance shifted the gut microbiome composition driving animal resilience
    Cristina Casto‐Rebollo, Argente, María José, García, María Luz, Ramona N. Pena, A. Blasco, Ibáñez-Escriche, Noelia · 2024 · Figshare
  49. MHC class II genes influence the gut microbiota of wild golden snub-nosed monkeys
    Ji-Bing Yan, Tian‐Qi Shi, Jin‐Bang Zhang, Fei Long, Paul A. Garber, Bao-Guo Li, Pei Zhang · 2026 · BMC Microbiology
  50. Understanding the role of ruminal microbiota in phenotype expression in Lacaune dairy sheep
    Guillermo Martinez Boggio · 2022
  51. Social Structure and Interactions Differentially Shape Aerotolerant and Anaerobic Gut Microbiomes in a Cooperative Breeding Species
    Chuen Zhang Lee, Sarah F. Worsley, Burke Terry, Jan Komdeur, Falk Hildebrand, Hannah L. Dugdale, David S. Richardson · 2026 · Molecular Ecology
  52. The island biology of the host microbiome
    Amar Sarkar, Aura Raulo, Mason R. Stothart, Neil G.O. Ibata, Siobhán Harty, Charlotte Jessica E. Metcalf, Brendan J. M. Bohannan, Gordon M. Bennett, Rachel N. Carmody · 2026 · Trends in Microbiology
  53. Early-life adversity shapes the relationship between growth and reproduction in free-ranging female rhesus macaques
    Rachel M. Petersen, Sam K. Patterson, Anja Widdig, Cassandra M. Turcotte, Susan C. Antón, Scott A. Williams, Ashly N. Romero, Samuel E. Bauman, Angelina V. Ruiz-Lambides, Michael J. Montague et al. · 2026 · Proceedings of the National Academy of Sciences
  54. Environmental microbial communities and host selection shape larval microbiomes
    Stephanie F. Hendricks, Amy L. Tan, Amelia G Williams, Katherine M. Buckley, Marie E. Strader · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  55. The hologenome concept and its implications for animal breeding in the multi-omics Era
    Tainã Figueiredo Cardoso, Luciana Correia de Almeida Regitano · 2026 · Genetics and Molecular Biology
  56. Probiotics, Gut Microbiome, and Livestock Production: From Mechanisms of Action to Precision Breeding
    Jia Tian, Li'e Hou, Yuanyuan Zhang, Yuan Wan, Siyuan Cheng, Xin Li · 2026 · Fermentation
  57. Home is Where the Heterogeneity Is: Housing Facility-level Differences in the Gut Microbiome and Metabolic Phenotype Confound Arsenic Effects on Glucose Homeostasis in Male Mice
    Judy Malas, Lidan Zhao, Michael Landeche, Ashley M. Sidebottom, Jessica Little, Jarrad Hampton‐Marcell, Robert Michael Sargis · 2026 · bioRxiv (Cold Spring Harbor Laboratory)