Profiling cellular diversity in sponges informs animal cell type and nervous system evolution

Cited by (241)

Items 201–241 of 241

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2. Tissue dissociation for single-cell and single-nuclei RNA sequencing for low amounts of input material
   Gordon Wiegleb, Susanne Reinhardt, Andreas Dahl, Nico Posnien · 2022 · Research Square
3. The contraction-expansion behaviour in the demosponge Tethya wilhelma is diurnal and light-controlled
   Sarah B. Flensburg, Anders L. Garm, Peter Funch · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
4. Apprentissage et intelligences du vivant
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5. Reconstructing emergent biological phenomena through comparative functional architectonics
   Vad Pérez, G. Yu. Lyubarsky · 2023 · Qeios
6. Gene expression divergence during Drosophila head development on single nuclei resolution
   Gordon Wiegleb · 2023 · eDiss (Georg-August-Universität Göttingen)
7. Ile razy powstawał układ nerwowy?
   Marcin Czerwiński, L.F. Sobala · 2024 · Kosmos
8. Semi-automated navigation for efficient targeting of electron tomography to regions of interest in volume correlative light and electron microscopy
   Kohki Konishi, Guilherme Neves, Matthew R. G. Russell, Masafumi Mimura, Juan Burrone, Roland A. Fleck · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
9. sc-SPLASH provides ultra-efficient reference-free discovery in barcoded single-cell sequencing
   Roozbeh Dehghannasiri, Marek Kokot, Alexander L. Starr, Jamie D. Maziarz, Tal Gordon, Serena Y. Tan, Peter Lincoln Wang, Ayelet Voskoboynik, Jacob M. Musser, Sebastian Deorowicz et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
10. ホルモンの起源についての考察
    祥郎 竹井 · 2023 · Comparative Endocrinology
11. Exploration and generation of cell transcriptomes over deep evolutionary time
    Ying Xu, Catherine Gatt, Esra Kaymak, Kensei Kikuchi, Thomas Bourguignon, Fabio Zanini · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
12. IRBITs, signaling molecules of great functional diversity
    Ying Liu, Xuhui Feng, Han Wu, Tianxiang Gui, Mingfeng Fu, Xudong Luo, Lei Zhao, Liming Chen · 2025 · Pflügers Archiv - European Journal of Physiology
13. A workflow for semi‐automated volume correlative light microscopy and transmission electron tomography
    Kohki Konishi, Guilherme Neves, Matthew R. G. Russell, Masafumi Mimura, Juan Burrone, Roland A. Fleck · 2025 · Journal of Microscopy
14. Editorial: Model organisms in embryonic development
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15. Establishing single cell RNA transcriptomics: a brief guide
    Alison G. Cole · 2025 · Frontiers in Zoology
16. A valuation based theory of learning’s origin and development
    Vincent Moneymaker · 2025 · Frontiers in Systems Neuroscience
17. A whole-body cell type atlas mapped into an electron microscopy volume of an annelid worm
    Oel Adam Phillip, Cyril Cros, Leslie Pan, Elena Buglakova, Haury Parra Samuel, Luca Santangeli, Tobias Gerber, Nikolaos Papalopoulos, Hernando Martínez Vergara, Puga David et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
18. Additional file 2 of The oral sensory organs in Bathochordaeus stygius (Tunicata Appendicularia) are unique in structure and homologous to the coronal organ
    Le, Mai-Lee Van, Müller, Lisa-Marie, Stach, Thomas · 2024 · Figshare
19. Additional file 2 of Cross-phyla protein annotation by structural prediction and alignment
    Fabian Ruperti, Νικόλαος Παπαδόπουλος, Jacob M. Musser, Milot Mirdita, Steinegger, Martin, Detlev Arendt · 2024 · Figshare
20. Additional file 1 of Cross-phyla protein annotation by structural prediction and alignment
    Fabian Ruperti, Νικόλαος Παπαδόπουλος, Jacob M. Musser, Milot Mirdita, Steinegger, Martin, Detlev Arendt · 2024 · Figshare
21. Additional file 1 of The oral sensory organs in Bathochordaeus stygius (Tunicata Appendicularia) are unique in structure and homologous to the coronal organ
    Le, Mai-Lee Van, Müller, Lisa-Marie, Thomas Stach · 2024 · Figshare
22. Additional file 1 of Tissue dissociation for single-cell and single-nuclei RNA sequencing for low amounts of input material
    Gordon Wiegleb, Reinhardt, Susanne, Dahl, Andreas, Nico Posnien · 2022 · Figshare
23. Additional file 3 of Meta-transcriptomic comparison of two sponge holobionts feeding on coral- and macroalgal-dissolved organic matter
    Sara Campana, Riesgo, Ana, Evelien Jongepier, Fuss, Janina, Gerard Muyzer C, Jasper Merijn de Goeij · 2022 · Figshare
24. Ctenophore neural systems: Independent origin(s) and “alien neurons”
    Leonid L. Moroz · 2025 · Elsevier eBooks
25. Alternative integrative systems in nerveless animals: Chemoconnectomics before synapses
    Leonid L. Moroz · 2025 · Elsevier eBooks
26. De Novo Transcriptome Analysis Reveals the Primary Metabolic Capacity of the Sponge Xestospongia sp. from Vietnam
    Le Bich Hang Pham, Do Hai Quynh, Chi Mai Nguyen, Nguyễn Tường Vân, Hai Ha Nguyen, Huu Hong Thu Nguyen, Khanh Linh Nguyen, Thi Hoe Pham, Quang Hung Nguyen, Quang Trung Le et al. · 2025 · Fishes
27. Co-option of Lysosomal machinery for sponge biosilicification
    Maitri Rangarajan-Paul, Scott Nichols, Martín Tresguerres · 2026 · Journal of Experimental Biology
28. How to train your sponge: imprinting material memories in marine sponge tissue
    Emile Kraus, P A Janmey, Joseph D. Paulsen, Alison E. Patteson · 2026 · New Journal of Physics
29. Exploring cell diversity and fidelity in crustacean limb regeneration using single-nucleus RNA sequencing
    Alba Almazán · 2022 · theses.fr (ABES)
30. Neural and secretory cell types of the cnidarian planula larva : insights into the settlement response
    Julia Ramon-Mateu · 2024 · theses.fr (ABES)
31. Reference-free discovery with barcoded single-cell sequencing
    Roozbeh Dehghannasiri, Marek Kokot, Alexander L. Starr, Jamie D. Maziarz, Tal Gordon, Serena Y. Tan, Peter Wang, Ayelet Voskoboynik, Jacob M. Musser, Sebastian Deorowicz et al. · 2026 · Nature Biotechnology
32. A screen for stress-induced sleep genes in Caenorhabditis elegans reveals a role for glutamate signaling
    Quinn Howe, Caroline Kominick, Mercedes Pierce, Gina Gazarra, Caroline E. Curtin, Santino Diana, Fredy J. Abboud, Jordan Olenginski, Mary Frattara, Ting Brown et al. · 2026 · Genetics
33. Validating the classics: Accurate reference gene panel for reliable RT-qPCR in Porifera
    Kseniia V. Skorentseva, Nikolai P. Melnikov, Alexander V. Ereskovsky, Andrey Lavrov, Aleena A. Saidova · 2026 · PLoS ONE
34. Developmental Expression of Transcription Factors and Wnt Ligands in Sponge Halisarca Dujardinii
    Ilya Borisenko, Dmitry Shaporev, Alexander V. Ereskovsky · 2026 · Molecular Reproduction and Development
35. Evolutionary and ontogenetic transformations of contractile cells: Adaptive and regulatory mechanisms
    Віктор Куйбіда, Петро Коханець · 2026 · Regulatory Mechanisms in Biosystems
36. Oxygen regulation in the earliest animals: spatiotemporal resolution of oxygen dynamics in single-osculum Halichondria panicea and Haliclona rosea sponges
    Lars Kumala, Malte Thomsen, Donald E. Canfield · 2026 · Frontiers in Physiology
37. Looking back: tracing the origins of sleep across the animal kingdom
    Jimmy J. Fraigne, Zoltan A. Torontali, Jessica C. Pressey · 2026 · Frontiers in Neuroscience
38. Pesci: fast and user-friendly software to compare single-cell gene expression across species
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39. Distinct cell states define larval and adult body plans in a hemichordate
    Paul A. Bump, Carolyn E. Brewster, Laurent Formery, Lauren Lubeck, Catherine Campbell, Maurizio Morri, Rene V. Sit, Daniel S. Rokhsar, Blair W. Benham-Pyle, Alejandro Sánchez Alvarado et al. · 2026 · Nature Communications
40. From promiscuity to specialization: The origin of cholinergic and monoaminergic signaling is pre-bilaterian
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41. Prevalence and diversity of Ly6/uPAR proteins and three-finger LU domains from the analysis of invertebrate genomes
    Alexander S. Paramonov, Zakhar O. Shenkarev, Ekaterina N. Lyukmanova · 2026 · Acta Naturae