Codiversification of gut microbiota with humans

Suzuki, Taichi A., Fitzstevens, J. Liam, Schmidt, Victor T., Enav, Hagay, Huus, Kelsey E., Mbong Ngwese, Mirabeau, Grießhammer, Anne, Pfleiderer, Anne +17 more·2022·Science

DOI 10.1126/science.abm7759

Cited by (210)

Items 101–200 of 210

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The effect of host admixture on wild house mouse gut microbiota is weak when accounting for spatial autocorrelation
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Linkage equilibrium between rare mutations
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Feature selection with a genetic algorithm can help improve the distinguishing power of microbiota information in monozygotic twins' identification
Guangping Fu, Guanju Ma, Shujie Dou, Qian Wang, Lihong Fu, Xiaojing Zhang, Chaolong Lu, Bin Cong, Shujin Li · 2023 · Frontiers in Microbiology
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Caoimhe M. K. Lynch, Kenneth J. O’Riordan, Gerard A. Clarke, John F. Cryan · 2023 · Springer eBooks
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Susan L. Acton, Michelle M O’ Donnell, Kalaichitra Periyasamy, Bharat Dixit, Haifeng Eishingdrelo, Colin Hill, R. Paul Ross, Laurent Chesnel · 2024 · Brain Behavior and Immunity
Phage-bacteria dynamics during the first years of life revealed by trans-kingdom marker gene analysis
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Gabriele Berg, Markus Antonietti, Dilfuza Egamberdieva, Lisé Korsten, Wisnu Adi Wicaksono · 2026 · Frontiers in Microbiology
Evolutionary Genomics of Human Gut Bacteria: Ecological Plasticity Across the Mutualism–Pathogenicity Spectrum
Yasmin N. Ramadan, Salwa Qasim Bukhari, Zinab Alatawi, Ghaleb Oriquat, Noura Hassan Abd Ellah, Eltayib Hassan Ahmad Mohamedosman, Rehab Ahmed, ‏Helal F. Hetta · 2026 · International Journal of Molecular Sciences
The association between flagellin producers in the gut microbiota and HDL-C level in humans
Jensen H. C. Yiu, Jieling Cai, Samson W. M. Cheung, Karie Tsz-Ching Chin, Chi Fai Chan, E. C., Rakesh Sharma, Bernhard Dorweiler, Connie W. Woo · 2023 · Frontiers in Microbiomes
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Gut fungal profiles reveal phylosymbiosis and codiversification across humans and nonhuman primates
Emily P. Van Syoc, Andres M. Gomez, Emily Davenport, Seth R. Bordenstein · 2025 · PLoS Biology
Microbiota and growth among infants and children in low-income and middle-income settings
James M. Njunge, Judd L. Walson · 2023 · Current Opinion in Clinical Nutrition & Metabolic Care
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Florent Mazel, Sarah C. L. Knowles, Elin Videvall, Amy R. Sweeny · 2023 · PubMed
A conserved genetic basis for commensal-host specificity through live imaging of colonization dynamics
Karina Gutiérrez-García, Kevin Aumiller, Ren Dodge, Benjamin Obadia, Ann Deng, Sneha Agrawal, Xincheng Yuan, Richard Wolff, Nandita R. Garud, William Basil Ludington · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
Selection and transmission of the gut microbiome alone shifts mammalian behavior
Taichi A. Suzuki, Tanja Akbuğa-Schön, Jillian L. Waters, Dennis Jakob, Dai Long Vu, Mallory A. Ballinger, Sara C. Di Rienzi, Hao Chang, Ivan E. de Araújo, Alexander Tyakht et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
Prehistoric Global Migration of Vanishing Gut Microbes With Humans
Matthew M. Carter, Zhiru Liu, Matthew R. Olm, Melanie Ann Martin, Daniel D. Sprockett, Benjamin C. Trumble, Hillard S Kaplan, Jonathan Stieglitz, Daniel Eid Rodriguez, David A. Relman et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
Sturgeon Cartilage-Derived Chondroitin Sulfate Exhibited Anti-inflammatory Activity against DSS-induced Colitis via Modification of Gut Microbiota
Rui-Yun Wu, Zi-Xin Han, Zhen-Yu Wang, Ping-Lan Li, N. Shang · 2024 · Food Science and Human Wellness
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Anna Kostka · 2025 · Applied Sciences
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James A. Versalovic, Eran Segal, Emeran A. Mayer, Glenn R. Gibson, Lorenzo Morelli, Gregor Reid · 2026 · Trends in Food Science & Technology
Gut motility as a driver of microbial community architecture and host-microbe evolution.
Markus Schwalbe, T. Bosch, S. El Aidy · 2026 · Trends in Microbiology
Ancient Species Diversity and Niche Adaptation in Tannerella and Porphyromonas Revealed Through Pangenomics
Aurore Galtier, Christina Warinner, Irina M. Velsko · 2026 · Genome Biology and Evolution
HIV Tat Expression and Cocaine Exposure Lead to Sex- and Age-Specific Changes of the Microbiota Composition in the Gut
Lu Li, Xiaojie Zhao, Johnny J. He · 2023 · Microorganisms
Domestication and evolutionary histories of specialized gut symbionts across cephalotine ants
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A conceptual framework for host‐associated microbiomes of hybrid organisms
Benjamin Thomas Camper, Zachary Laughlin, Daniel A. Malagon, Robert D. Denton, Sharon Anne Bewick · 2024 · Methods in Ecology and Evolution
Recent genetic drift in the co-diversified gut bacterial symbionts of laboratory mice
Daniel D. Sprockett, Brian A. Dillard, Abigail A. Landers, Jon G. Sanders, Andrew H. Moeller · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
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Benjamín Durán‐Vinet, Jo-Ann L. Stanton, Gert‐Jan Jeunen, Xavier Pochon, Anastasija Zaiko, Neil J. Gemmell · 2025 · Trends in biotechnology
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Mithila Banik, Saroj Bashyal, Khandaker Asif Ahmed, Kakon Banik, Kamal Dua, Jaesung Peter Choi, Keshav Raj Paudel, Rajib Majumder · 2026 · The Veterinary Journal
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Inès Pons, Marleny García-Lozano, Christiane Emmerich, Aftab Mahmood Ayas, Christine Henzler, Hagay Enav, Ruth E. Ley, Hassan Salem · 2026 · Nature Communications
Isolation by distance promotes gut microbial strain divergence in wild mouse populations
Brian A. Dillard, Jon G. Sanders, Azhar P. Husain, Kelsey M. Yule, Andrew H. Moeller · 2026 · Nature Ecology & Evolution
Study on the difference of gut microbiota in DLY and Diqing Tibetan pigs induce by high fiber diet
Lijie Yang, Bingqian Yao, Shimin Zhang, Yuting Yang, Hongbin Pan, Xiangfang Zeng, Shiyan Qiao · 2024 · Journal of Animal Physiology and Animal Nutrition
Dysbiose
Anne Wanitschek · 2024 · Heilpflanzen
Expansion of a bacterial operon during cancer treatment ameliorates drug toxicity
Kai R. Trepka, Wesley Allen Kidder, Than S. Kyaw, Taylor Halsey, C. Anders Olson, Edwin F. Ortega, Cecilia A. Noecker, Vaibhav Upadhyay, Dalila Stanfield, Paige Steiding et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
Community coalescence reveals strong selection and coexistence within species in complex microbial communities
Sophie Jean Walton, Qing Xu, Richa Sharma, Hannah R. Gellert, Chih-Fu Yeh, Jonas Cremer, Katherine S. Xue, Dmitri A. Petrov, Benjamin H. Good · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
Elucidating the transmission landscape of the human microbiome
Amira Metwaly, Dirk Haller · 2023 · Nature Reviews Gastroenterology & Hepatology
The strength of gut microbiota transfer along social networks and genealogical lineages in the house mouse
Barbora Bendová, Barbora Vošlajerová Bímová, Dagmar Čížková, Kristina Daniszová, Ľudovít Ďureje, Zuzana Hiadlovská, Miloš Macholán, Jaroslav Piálek, Lucie Schmiedová, Jakub Kreisinger · 2024 · FEMS Microbiology Ecology
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Clarissa Asha Febinia, Hirzi Luqman, Pradiptajati Kusuma, Lidwina Priliani, Joseph Lewis, Desak Made Wihandani, Gde Ngurah Indraguna Pinatih, Herawati Sudoyo, Alexandre Almeida, Safarina G. Malik et al. · 2025 · Cell Reports
Infection with gut parasites correlates with gut microbiome diversity across human populations in Africa
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Characterization of gut microbiomes in rural Honduras reveals uncharacterized species and associations with human genetic variation
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Lifetime existence of a core of mutualistic symbionts and functionally uncoupled taxa in the gut of a Mediterranean cohort
Susana Ruiz‐Ruiz, Samuel Piquer-Esteban, Benjamí Pérez-Rocher, Vicente Pérez‐Brocal, Vicente Arnau, Alejandro Artacho, Wladimiro Diaz, Nuria Jiménez‐Hernández, Javier Pons, José A. Castro et al. · 2026 · Scientific Reports
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Limited codiversification of the gut microbiota within humans
Benjamin H. Good · 2026 · mBio
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Prehistoric global migration of vanishing gut microbes with humans
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Edward E. Ishiguro, Natasha Haskey, Kristina Campbell · 2023 · Elsevier eBooks
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Linkage of nucleotide and functional diversity varies across gut bacteria
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