The DOI matches its Crossref record; 39 of the 39 references it cites were found in a registry or an index.
Environmental Factors Modulating Antibiotic and Siderophore Biosynthesis by Pseudomonas fluorescens Biocontrol Strains
Open accessAbstract
Understanding the environmental factors that regulate the biosynthesis of antimicrobial compounds by disease-suppressive strains of Pseudomonas fluorescens is an essential step toward improving the level and reliability of their biocontrol activity. We used liquid culture assays to identify several minerals and carbon sources which had a differential influence on the production of the antibiotics 2,4-diacetylphloroglucinol (PHL), pyoluteorin (PLT), and pyrrolnitrin and the siderophores salicylic acid and pyochelin by the model strain CHA0, which was isolated from a natural disease-suppressive soil in Switzerland. Production of PHL was stimulated by Zn 2+ , NH 4 Mo 2+ , and glucose; the precursor compound mono-acetylphloroglucinol was stimulated by the same factors as PHL. Production of PLT was stimulated by Zn 2+ , Co 2+ , and glycerol but was repressed by glucose. Pyrrolnitrin production was increased by fructose, mannitol, and a mixture of Zn 2+ and NH 4 Mo 2+ . Pyochelin production was increased by Co 2+ , fructose, mannitol, and glucose. Interestingly, production of its precursor salicylic acid was increased by different factors, i.e., NH 4 Mo 2+ , glycerol, and glucose. The mixture of Zn 2+ and NH 4 Mo 2+ with fructose, mannitol, or glycerol further enhanced the production of PHL and PLT compared with either the minerals or the carbon sources used alone, but it did not improve siderophore production. Extending fermentation time from 2 to 5 days increased the accumulation of PLT, pyrrolnitrin, and pyochelin but not of PHL. When findings with CHA0 were extended to an ecologically and genetically diverse collection of 41 P. fluorescens biocontrol strains, the effect of certain factors was strain dependent, while others had a general effect. Stimulation of PHL by Zn 2+ and glucose was strain dependent, whereas PLT production by all strains that can produce this compound was stimulated by Zn 2+ and transiently repressed by glucose. Inorganic phosphate reduced PHL production by CHA0 and seven other strains tested but to various degrees. Production of PLT but not pyrrolnitrin by CHA0 was also reduced by 100 mM phosphate. The use of 1/10-strength nutrient broth-yeast extract, compared with standard nutrient broth-yeast extract, amended with glucose and/or glycerol resulted in dramatically increased accumulations of PHL (but not PLT), pyochelin, and salicylic acid, indicating that the ratio of carbon source to nutrient concentration played a key role in the metabolic flow. The results of this study (i) provide insight into the biosynthetic regulation of antimicrobial compounds, (ii) limit the number of factors for intensive study in situ, and (iii) indicate factors that can be manipulated to improve bacterial inoculants.
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Cites
Making Greater Use of Introduced Microorganisms For Biological Control of Plant Pathogens
Cook, R. (1993) · Annual Review of Phytopathology · doi:10.1146/annurev.phyto.31.1.53 · Cited by 628
Control of antibiotic biosynthesis
Martin, J. F., & Demain, A. L. (1980) · Microbiological Reviews · doi:10.1128/mmbr.44.2.230-251.1980 · Cited by 560
Shanahan, P., O'Sullivan, D. J., Simpson, P., Glennon, J. D., & O'Gara, F. (1992) · Applied and Environmental Microbiology · doi:10.1128/aem.58.1.353-358.1992 · Cited by 513
Frequency of Antibiotic-Producing Pseudomonas spp. in Natural Environments
Raaijmakers, J. M., Weller, D. M., & Thomashow, L. S. (1997) · Applied and Environmental Microbiology · doi:10.1128/aem.63.3.881-887.1997 · Cited by 494
Mazzola, M., Cook, R. J., Thomashow, L. S., Weller, D. M., & Pierson, L. S. (1992) · Applied and Environmental Microbiology · doi:10.1128/aem.58.8.2616-2624.1992 · Cited by 395
Laville, J., Voisard, C., Keel, C., Maurhofer, M., Défago, G., & Haas, D. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.5.1562 · Cited by 373
De Meyer, G., & Höfte, M. (1997) · Phytopathology® · doi:10.1094/phyto.1997.87.6.588 · Cited by 334
Thomashow, L. S., & Weller, D. M. (1996) · Plant-Microbe Interactions · doi:10.1007/978-1-4613-1213-0_6 · Cited by 326
Maurhofer, M., Reimmann, C., Schmidli-Sacherer, P., Heeb, S., Haas, D., & Défago, G. (1998) · Phytopathology® · doi:10.1094/phyto.1998.88.7.678 · Cited by 326
Lemanceau, P., Corberand, T., Gardan, L., Latour, X., Laguerre, G., Boeufgras, J., & Alabouvette, C. (1995) · Applied and Environmental Microbiology · doi:10.1128/aem.61.3.1004-1012.1995 · Cited by 300
Cited by
Compant, S., Duffy, B., Nowak, J., Clément, C., & Barka, E. A. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.9.4951-4959.2005 · Cited by 2,640
Self-citationMicrobial interactions and biocontrol in the rhizosphere
Whipps, J. M. (2001) · Journal of Experimental Botany · doi:10.1093/jexbot/52.suppl_1.487 · Cited by 1,934
Plant growth-promoting rhizobacteria and root system functioning
Vacheron, J., Desbrosses, G., Bouffaud, M.-L., Touraine, B., Moënne-Loccoz, Y., Muller, D., Legendre, L., Wisniewski-Dyé, F., & Prigent-Combaret, C. (2013) · Frontiers in Plant Science · doi:10.3389/fpls.2013.00356 · Cited by 1,524
(2011) · Cited by 918
Bacterial siderophores efficiently provide iron to iron-starved tomato plants in hydroponics culture
Radzki, W., Gutierrez Mañero, F. J., Algar, E., Lucas García, J. A., García-Villaraco, A., & Ramos Solano, B. (2013) · Antonie van Leeuwenhoek · doi:10.1007/s10482-013-9954-9 · Cited by 294
Metadata
- Authors
- Duffy, B. K., & Défago, G.
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 1999-06
- Volume
- 65
- Issue
- 6
- Pages
- 2429-2438
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- OpenAlex
- W2151617451
- Cited by
- 486
- References
- 39
- FWCI
- 13.81
- Type
- journal article
- Language
- en
- Open access
- green
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- Duffy, B. K., & Défago, G. (1999). Environmental Factors Modulating Antibiotic and Siderophore Biosynthesis by Pseudomonas fluorescens Biocontrol Strains. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.65.6.2429-2438.1999
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