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Characterization of a Class II Defective Transposon Carrying Two Haloacetate Dehalogenase Genes from Delftia acidovorans Plasmid pUO1

Sota, Masahiro, Endo, Masahiro, Nitta, Keiji, Kawasaki, Haruhiko, Tsuda, Masataka·2002·Applied and Environmental Microbiology

Abstract

The two haloacetate dehalogenase genes, dehH1 and dehH2 , on the 65-kb plasmid pUO1 from Delftia acidovorans strain B were found to be located on transposable elements. The dehH2 gene was carried on an 8.9-kb class I composite transposon (Tn Had1 ) that was flanked by two directly repeated copies of IS 1071 , IS 1071 L and IS 1071 R. The dehH1 gene was also flanked by IS 1071 L and a truncated version of IS 1071 (IS 1071 N). Tn Had1 , dehH1 , and IS 1071 N were located on a 15.6-kb class II transposon (Tn Had2 ) whose terminal inverted repeats and res site showed high homology with those of the Tn 21 -related transposons. Tn Had2 was defective in transposition because of its lacking the transposase and resolvase genes. Tn Had2 could transpose when the Tn 21 -encoded transposase and resolvase were supplied in trans . These results demonstrated that Tn Had2 is a defective Tn 21 -related transposon carrying another class I catabolic transposon.

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Research works printed but not linked: 50

  1. 10.1016/0378-1119(92)90597-I · DOI
  2. 10.1016/0378-1119(91)90384-N · DOI
  3. Ausubel F. M. R. Brent R. E. Kingston D. D. Moore J. G. Seidman J. A. Smith and K. Struhl. 1994. Current protocols in molecular biology. Wiley New York N.Y.
  4. 10.1007/BF00330839 · DOI
  5. 10.1099/00221287-147-8-2141 · DOI
  6. 10.1007/BF00262201 · DOI
  7. 10.1128/jb.151.1.222-228.1982 · DOI
  8. Devereux, R., and S. G. Willis. 1995. Amplification of ribosomal RNA sequences, p. 3.3.1-3.3.11. In F. de Bruijn (ed.), Molecular microbial ecology manual. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  9. 10.1128/AEM.64.5.1940-1946.1998 · DOI
  10. 10.1007/BF00334812 · DOI
  11. 10.1128/jb.179.2.399-408.1997 · DOI
  12. 10.1016/0147-619X(82)90065-8 · DOI
  13. 10.1016/0147-619X(90)90001-S · DOI
  14. 10.1128/aem.63.6.2403-2410.1997 · DOI
  15. 10.1128/aem.49.6.1544-1546.1985 · DOI
  16. Kawasaki, H., N. Tone, and K. Tonomura. 1981. Plasmid-determined dehalogenation of haloacetates in Moraxella species. Agric. Biol. Chem.45:29-34.
  17. Kawasaki, H., N. Tone, and K. Tonomura. 1981. Purification and properties of haloacetate halidohydrolase specified by plasmid from Moraxella sp. strain B. Agric. Biol. Chem.45:35-42.
  18. 10.1099/00221287-138-7-1317 · DOI · Paper page
  19. Kawasaki, H., H. Yahara, and K. Tonomura. 1983. Cleavage maps of dehalogenation plasmid pUO1 and its derivative harbored in Moraxella sp. Agric. Biol. Chem.47:1639-1641.
  20. Kawasaki, H., H. Yahara, and K. Tonomura. 1981. Isolation and characterization of plasmid pUO1 mediating dehalogenation of haloacetate and mercury resistance in Moraxella sp. B. Agric. Biol. Chem.45:1477-1481.
  21. Mahillon, J. 1998. Transposons as gene haulers. APMIS Suppl.106:29-36.
  22. 10.1128/MMBR.62.3.725-774.1998 · DOI
  23. 10.1128/jb.171.7.3996-4001.1989 · DOI
  24. 10.1128/JB.183.19.5684-5697.2001 · DOI
  25. May, E. W., and N. D. Grindley. 1995. A functional analysis of the inverted repeat of the γδ transposable element. J. Mol. Biol.247:578-587.
  26. 10.1007/BF00271202 · DOI
  27. 10.1073/pnas.88.19.8312 · DOI
  28. 10.1139/m93-013 · DOI
  29. 10.1016/S0022-2836(05)80254-2 · DOI
  30. 10.1128/AEM.67.8.3530-3541.2001 · DOI
  31. 10.1099/13500872-140-9-2305 · DOI
  32. 10.1002/j.1460-2075.1985.tb03904.x · DOI
  33. 10.1073/pnas.74.12.5463 · DOI · Paper page
  34. Sherratt, D. 1989. Tn3 and related transposable elements: site-specific recombination and transposition, p. 163-184. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
  35. 10.1093/nar/16.1.358 · DOI
  36. 10.1128/AEM.67.4.1508-1516.2001 · DOI
  37. 10.1128/JB.183.21.6215-6224.2001 · DOI
  38. 10.1007/BF00325693 · DOI
  39. 10.1007/BF00333400 · DOI
  40. 10.1007/BF00315794 · DOI
  41. 10.1128/jb.171.3.1386-1393.1989 · DOI
  42. 10.1016/S1389-1723(99)80086-3 · DOI
  43. 10.1128/mr.56.4.677-694.1992 · DOI
  44. 10.1016/0147-619X(82)90005-1 · DOI
  45. 10.1016/0378-1119(88)90212-0 · DOI
  46. Wen, A., M. Fegan, C. Hayward, S. Chakraborty, and L. I. Sly. 1999. Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov. Int. J. Syst. Bacteriol.49:567-576.
  47. 10.1128/jb.172.9.4959-4963.1990 · DOI
  48. 10.1007/BF00696460 · DOI
  49. 10.1007/BF00696468 · DOI
  50. 10.1016/0378-1119(85)90120-9 · DOI

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Metadata

Authors
Sota, M., Endo, M., Nitta, K., Kawasaki, H., & Tsuda, M.
Affiliations
  • Department of Environmental Simulation, Institute for Environmental Sciences, Obuchi, Rokkasho, Aomori 039-3212
  • Department of Applied Biochemistry, Graduate School of Agriculture and Biological Science, Osaka Prefecture University, Sakai, Osaka 599-8531, Japan
  • Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577
Venue
Applied and Environmental Microbiology
Published
2002-05
Volume
68
Issue
5
Pages
2307-2315
ISSN
  • 0099-2240
  • 1098-5336
Cited by
35
References
0
Language
en

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CoChat. (2026). Citation check: Characterization of a Class II Defective Transposon Carrying Two Haloacetate Dehalogenase Genes from Delftia acidovorans Plasmid pUO1. https://app.cochat.ai/papers/10.1128/aem.68.5.2307-2315.2002
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Sota, M., Endo, M., Nitta, K., Kawasaki, H., & Tsuda, M. (2002). Characterization of a Class II Defective Transposon Carrying Two Haloacetate Dehalogenase Genes from Delftia acidovorans Plasmid pUO1. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.68.5.2307-2315.2002