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Purification, Characterization, and Sequence Analysis of a Potential Virulence Factor from Porphyromonas gingivalis , Peptidylarginine Deiminase
Open accessAbstract
The initiation and progression of adult-onset periodontitis has been associated with infection of the gingival sulcus by Porphyromonas gingivalis . This organism utilizes a multitude of virulence factors to evade host defenses as it establishes itself as one of the predominant pathogens in periodontal pockets. A feature common to many other oral pathogens is the production of ammonia due to its protective effect during acidic cleansing cycles in the mouth. Additionally, ammonia production by P. gingivalis has been proposed as a virulence factor due to its negative effects on neutrophil function. In this study, we describe the first purification of a peptidylarginine deiminase (PAD) from a prokaryote. PAD exhibits biochemical characteristics and properties that suggest that it may be a virulence agent. PAD deiminates the guanidino group of carboxyl-terminal arginine residues on a variety of peptides, including the vasoregulatory peptide-hormone bradykinin, to yield ammonia and a citrulline residue. The soluble protein has an apparent mass of 46 kDa, while the DNA sequence predicts a full-length protein of 61.7 kDa. PAD is optimally active at 55°C, stable at low pH, and shows the greatest activity above pH 9.0. Interestingly, in the presence of stabilizing factors, PAD is resistant to limited proteolysis and retains significant activity after short-term boiling. We propose that PAD, acting in concert with arginine-specific proteinases from P. gingivalis , promotes the growth of the pathogen in the periodontal pocket, initially by enhancing its survivability and then by assisting the organism in its circumvention of host humoral defenses.
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“Citrullination of arginine occurs via the action of peptidyl arginine deiminase, an enzyme found in both humans and P gingivalis.211”
From The oral microbiome: Role of key organisms and complex networks in oral health and disease (2021) · cites this paper as [211]
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BackgroundInfluentialPorphyromonas gulae and PPAD antibodies are not related to citrullination in rheumatoid arthritis
Castellar‐Mendoza, C., Castillo, D. M., Chila‐Moreno, L., Bautista‐Molano, W., & Romero‐Sánchez, C. (2023) · Clinical Oral Investigations · doi:10.1007/s00784-023-04964-w · Cited by 7
Ibañez, S., Ferreiro, C., Contreras, A., Omar Valenzuela, L., Giadalah, N., Jara, V., M, F. J., & Jarpa, E. P. (2015) · Revista médica de Chile · doi:10.4067/s0034-98872015001200006 · Cited by 7
Is the celiac disease model relevant to rheumatoid arthritis?
Meyer, O. (2003) · Joint Bone Spine · doi:10.1016/j.jbspin.2003.10.003 · Cited by 7
Citrullinated peptides as drug candidates for rheumatoid arthritis
Bustos, A. H., Brüner, M., Kragstrup, T. W., & Astakhova, K. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1648913 · Cited by 6
Unusual proteins in Giardia duodenalis and their role in survival
Ropolo, A. S., Feliziani, C., & Touz, M. C. (2019) · Advances in Parasitology/Advances in parasitology · doi:10.1016/bs.apar.2019.07.001 · Cited by 6
Parello, C. S. L. (2020) · Translational Systems Medicine and Oral Disease · doi:10.1016/b978-0-12-813762-8.00006-2 · Cited by 6
Rheumatoid Arthritis and Periodontal Disease: A Rheumatologist's Perspective
Rosenstein, E. D., Kushner, L. J., & Kramer, N. (2014) · Current Oral Health Reports · doi:10.1007/s40496-014-0038-3 · Cited by 6
Risk factor assessment of rheumatoid arthritis in North Kerala
Paul, B. J., & Pariyapurath, R. (2018) · European Journal of Rheumatology · doi:10.5152/eurjrheum.2018.17111 · Cited by 6
Lin, C., Chen, D., Chao, W., Liao, T., Chen, Y., & Chen, H. (2017) · PLoS ONE · doi:10.1371/journal.pone.0182284 · Cited by 6
Bautista‐Molano, W., Puin, S. R. U., Niño, J. C. M., Lafaurie, G. I., Valle, R. R., & Romero‐Sánchez, C. (2012) · Revista Colombiana de Reumatología · doi:10.1016/s0121-8123(12)70030-0 · Cited by 5
Sete, M. R. C., Carlos, J. C., de Mello‐Neto, J. M., Lira‐Junior, R., Brito, F., Boström, E. A., Sztajnbok, F., & Figueredo, C. M. (2021) · Journal of Periodontal Research · doi:10.1111/jre.12924 · Cited by 5
Citrullination and Autoimmunity
Valesini, G., Gerardi, M. C., Iannuccelli, C., Pacucci, V. A., Pendolino, M., & Shoenfeld, Y. (2019) · Elsevier eBooks · doi:10.1016/b978-0-12-814307-0.00014-1 · Cited by 5
Autoimmune correlation of rheumatoid arthritis and periodontitis
Arunachalam, L. T. (2014) · Journal of Indian Society of Periodontology · doi:10.4103/0972-124x.142470 · Cited by 5
“McGraw et al ., [20] tested various compounds and reported that the serine-and cysteine protease inhibitor leupeptin is able to completely inhibit PPAD at millimolar levels, with other inhibitors such as thiourea, thio-l-citrulline, and the serine and cysteine protease inhibitor TLCK ( N‑…”
Periodontitis and rheumatoid arthritis
Kobayashi, T., & Yoshie, H. (2012) · 日本歯周病学会会誌 · doi:10.2329/perio.54.11 · Cited by 5
Taneja, V. (2019) · Elsevier eBooks · doi:10.1016/b978-0-12-812102-3.00026-9 · Cited by 5
Does a biological link exist between periodontitis and rheumatoid arthritis?
Joseph, R. (2014) · World Journal of Rheumatology · doi:10.5499/wjr.v4.i3.80 · Cited by 5
Guanidine-Modifying Enzymes in the Pentein Superfamily
Linsky, T. W., & Fast, W. L. (2010) · Elsevier eBooks · doi:10.1016/b978-008045382-8.00170-2 · Cited by 5
Kaneda, T., Watanabe, M., Honda, H., Yamamoto, M., Inagaki, T., & Hironaka, S. (2024) · Analytical Sciences · doi:10.1007/s44211-023-00501-7 · Cited by 4
Thilagar, S. S., Rathinavelu, P. K., & Yadalam, P. K. (2024) · Journal of Orofacial Sciences · doi:10.4103/jofs.jofs_242_23 · Cited by 4
Seta, N. (2024) · The Bulletin of Tokyo Dental College · doi:10.2209/tdcpublication.2024-0012 · Cited by 4
Optimization of citrulline production from a Bacillus subtilis BH-01 isolated from raw buffalo milk
Mansour, M. A. K., Ali, S., Hassan, M. A. M., Gabra, F. A., & Mawad, A. M. M. (2025) · BMC Microbiology · doi:10.1186/s12866-025-03768-0 · Cited by 4
Oral Microbiome Dysbiosis and Citrullination in Rheumatoid Arthritis
Xia, Y., Mankia, K. S., Do, T., & Meade, J. L. (2025) · Advances in experimental medicine and biology · doi:10.1007/978-3-031-79146-8_12 · Cited by 4
Kamińska, M., Dudzinska, N. A. M., Yucel‐Lindberg, T., Söder, B., Narayanan, A., Potempa, J., & Mydel, P. M. (2025) · Journal of Oral Microbiology · doi:10.1080/20002297.2025.2479903 · Cited by 4
“Since PPAD was first isolated and characterized in 1999 [13], the enzyme has been suspected to contribute to P. gingivalis virulence.”
Self-citationOral Infections and Autoimmune Diseases
Janket, S., Kanasi, E., & Baird, A. E. (2015) · Elsevier eBooks · doi:10.1016/b978-0-444-63269-2.00063-5 · Cited by 4
Oral microbiome of the inner surface of face masks and whole saliva during the COVID-19 pandemic
Lee, Y., Kim, H., Heo, D. W., Ahn, I.-S., & Park, H. (2023) · Frontiers in Oral Health · doi:10.3389/froh.2023.1178020 · Cited by 4
“gingivalis, an anaerobic Gram-negative bacterium that is a keystone oral pathogen in periodontitis (27), was detected in 25% of periodontally healthy participants (28).”
BackgroundZhao, C., Ling, B., Dong, L., & Liu, Y. (2017) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.25313 · Cited by 4
Geoepidemiology of Autoimmune Diseases
Generali, E., & Selmi, C. F. (2019) · Elsevier eBooks · doi:10.1016/b978-0-12-814307-0.00022-0 · Cited by 4
New paradigm in the relationship between periodontal disease and systemic diseases
Yamazaki, K. (2016) · Wiley eBooks · doi:10.1002/9781118982907.ch15 · Cited by 4
Metadata
- Authors
- McGraw, W. T., Potempa, J., Farley, D., & Travis, J.
- Affiliations
- University of Georgia (US)
- Jagiellonian University (PL)
- <!--label omitted: 3-->Department of Arthritis Biology, Novartis Pharmaceuticals, Summit, New Jersey 07901,3 and
- Venue
- Infection and Immunity
- Publisher
- American Society for Microbiology
- Published
- 1999-07
- Volume
- 67
- Issue
- 7
- Pages
- 3248-3256
- ISSN
- 0019-9567 (ISSN-L)
- 1098-5522
- PMC
- PMC116503
- OpenAlex
- W1943338444
- Cited by
- 378
- References
- 47
- Citations by year
- 2026: 9 · 2025: 13 · 2024: 12 · 2023: 15 · 2022: 19 · 2021: 15 · 2020: 16 · 2019: 30 · 2018: 24 · 2017: 37 · 2016: 26 · 2015: 28 · 2014: 22 · 2013: 27 · 2012: 20
- FWCI
- 1.60
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Infection and Immunity (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Health Sciences › Dentistry › Periodontics › Oral and gingival health research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bacterial biofilms and quorum sensing
- Keywords
- Porphyromonas gingivalis, peptidylarginine deiminase, virulence factors, periodontitis, ammonia synthesis, bradykinin, citrullination, protein purification, protein stability, host defense evasion, periodontal pockets
- MeSH terms
- Protein-Arginine Deiminases, Protein-Arginine Deiminase Type 4, Amino Acid Sequence, Base Sequence, Enzyme Activation, Humans, Hydrolases, Molecular Sequence Data, Periodontitis, Virulence, Bacteroidaceae Infections, Porphyromonas gingivalis, Sequence Analysis
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