The DOI matches its Crossref record; 22 of the 22 references it cites were found in a registry or an index.
Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor
Open accessAbstract
The promoter region of the pColV-K30-encoded operon specifying biosynthesis and transport of the siderophore aerobactin was subjected to deletion analysis to determine the smallest DNA sequence affording iron regulation of a iucA'-'lacZ gene fusion. A 78-base-pair (bp) region containing the main (P1) promoter retained the character of inducibility under iron starvation. A 250-bp fragment carrying this sequence was examined for protection against DNase I by the Fur protein, the product of a gene (fur) required for negative control of several iron-regulated functions. The DNase I footprints, in the presence of various divalent heavy-metal ions added as corepressors, revealed two contiguous binding sites with different lengths and affinities for Fur. Increased concentrations of the protein appeared to elicit formation of repressor oligomers which bind to the upstream and downstream regions of the P1 promoter in a metal-dependent fashion, but with a presently undefined stoichiometry. The primary site for Fur binding spans 31 bp and contains two overlapping symmetry dyads which share the sequence 5'-TCATT-3'. It also contains extensive homology with a 19-bp consensus sequence for iron-regulated genes as deduced from comparison with the fhuA and fepA putative promoter sequences.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Consensus sequences bound by Fur in E. coli , P. aeruginosa , V. cholerae and C. jejuni are also AT rich 10 , 17 , 30 , 32 .”
From Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator (2015) · cites this paper as [32]
Citations
Cites
Molecular Cloning: A Laboratory Manual
Sambrook, J., Fritsch, E., & Maniatis, T. (1989) · UCLA - Biblioteca de Ciencias de la Salud · Cited by 133,589
Experiments in molecular genetics
Miller, J. H. (1972) · Medical Entomology and Zoology · Cited by 27,157
Silhavy, T. J., Berman, M. L., & Enquist, L. W. (1984) · Medical Entomology and Zoology · Cited by 2,406
Pabo, C. O., & Sauer, R. T. (1984) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.53.070184.001453 · Cited by 1,585
Regulation of ferric iron transport in Escherichia coli K12: Isolation of a constitutive mutant
Hantke, K. (1981) · Molecular and General Genetics MGG · doi:10.1007/bf00269672 · Cited by 563
IRON ABSORPTION AND TRANSPORT IN MICROORGANISMS
Neilands, J. B. (1981) · Annual Review of Nutrition · doi:10.1146/annurev.nu.01.070181.000331 · Cited by 477
Self-citationInteractions between DNA-bound repressors govern regulation by the λ phage repressor
Johnson, A. D., Meyer, B. J., & Ptashne, M. (1979) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.76.10.5061 · Cited by 324
Aerobactin biosynthesis and transport genes of plasmid ColV-K30 in Escherichia coli K-12
de Lorenzo, V., Bindereif, A., Paw, B. H., & Neilands, J. B. (1986) · Journal of Bacteriology · doi:10.1128/jb.165.2.570-578.1986 · Cited by 225
Self-citationLundrigan, M. D., & Kadner, R. J. (1986) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)67457-5 · Cited by 209
Cloning of the repressor protein gene of iron-regulated systems in Escherichia coli K12
Hantke, K. (1984) · Molecular and General Genetics MGG · doi:10.1007/bf00330982 · Cited by 203
A dimer of AraC protein contacts three adjacent major groove regions of the araI DNA site.
Hendrickson, W. G., & Schleif, R. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.10.3129 · Cited by 195
Nucleotide sequence of the iron regulatory gene fur
Schäffer, S., Hantke, K., & Braun, V. (1985) · Molecular and General Genetics MGG · doi:10.1007/bf00383321 · Cited by 163
Hantke, K. (1983) · Molecular and General Genetics MGG · doi:10.1007/bf00334830 · Cited by 123
Protein fusions of beta-galactosidase to the ferrichrome-iron receptor of Escherichia coli K-12
Coulton, J. W., Mason, P., Cameron, D. R., Carmel, G., Jean, R., & Rode, H. (1986) · Journal of Bacteriology · doi:10.1128/jb.165.1.181-192.1986 · Cited by 121
de Lorenzo, V., & Neilands, J. B. (1986) · Journal of Bacteriology · doi:10.1128/jb.167.1.350-355.1986 · Cited by 121
Self-citationMapping of a mutation affecting regulation of iron uptake systems in Escherichia coli K-12
Bagg, A., & Neilands, J. B. (1985) · Journal of Bacteriology · doi:10.1128/jb.161.1.450-453.1985 · Cited by 95
Self-citationGross, R., Engelbrecht, F., & Braun, V. (1985) · Molecular and General Genetics MGG · doi:10.1007/bf00425661 · Cited by 81
Bindereif, A., & Neilands, J. B. (1985) · Journal of Bacteriology · doi:10.1128/jb.162.3.1039-1046.1985 · Cited by 69
Self-citationThe unusual features of the iron transport systems of Escherichia coli
Braun, V. (1985) · Trends in Biochemical Sciences · doi:10.1016/0968-0004(85)90237-3 · Cited by 60
Fleming, T. P., Nahiik, M. S., Neilands, J. B., & McIntosh, M. A. (1985) · Gene · doi:10.1016/0378-1119(85)90293-8 · Cited by 29
Self-citationCharacterization of a plasmid carrying theEscherichia coliK-12entD, fepA, fes, andentFgenes
Coderre, P. E., & Earhart, C. F. (1984) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1984.tb01385.x · Cited by 28
Locus affecting regulation of the colicin I receptor by iron
Worsham, P. L., & Konisky, J. (1985) · Journal of Bacteriology · doi:10.1128/jb.161.1.428-431.1985 · Cited by 5
Cited by
Sorted by citations
Herrero, M., de Lorenzo, V., & Timmis, K. N. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.11.6557-6567.1990 · Cited by 1,590
“To achieve expression of the bar gene in a variety of gram-negative bacteria, we placed its transcription under the iron-regulated aerobactin promoter of pColV-K30 (10).”
BackgroundSelf-citationIron and Oxidative Stress in Bacteria
Touati, D. (2000) · Archives of Biochemistry and Biophysics · doi:10.1006/abbi.1999.1518 · Cited by 915
Opening the Iron Box: Transcriptional Metalloregulation by the Fur Protein
Escolar, L., Pérez-Martín, J., & de Lorenzo, V. (1999) · Journal of Bacteriology · doi:10.1128/jb.181.20.6223-6229.1999 · Cited by 815
Traits of fluorescent Pseudomonas spp. involved in suppression of plant root pathogens
O’Sullivan, D. J., & O’Gara, F. (1992) · Microbiological Reviews · doi:10.1128/mr.56.4.662-676.1992 · Cited by 743
Role of iron in regulation of virulence genes
Litwin, C. M., & Calderwood, S. B. (1993) · Clinical Microbiology Reviews · doi:10.1128/cmr.6.2.137 · Cited by 651
“coli fur gene itself, raising the possibility that there may be autoregulation of Jifr by iron (44).”
BackgroundMethodInfluential
Metadata
- Authors
- de Lorenzo, V, Wee, S., Herrero, M., & Neilands, J. B.
- Affiliations
- University of California, Berkeley (US)
- Venue
- Journal of Bacteriology
- Publisher
- American Society for Microbiology
- Published
- 1987-06
- Volume
- 169
- Issue
- 6
- Pages
- 2624-2630
- ISSN
- 0021-9193 (ISSN-L)
- 1098-5530
- PMC
- PMC212138
- OpenAlex
- W2131282911
- Cited by
- 536
- References
- 22
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 7 · 2023: 5 · 2022: 6 · 2021: 8 · 2020: 9 · 2019: 4 · 2018: 8 · 2017: 6 · 2016: 13 · 2015: 12 · 2014: 11 · 2013: 9 · 2012: 21
- FWCI
- 14.06
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Bacteriology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Ministerio de Economía y Competitividad
- National Institutes of Health (1f05tw003577-01)
- U.S. Public Health Service (A104156)
- Fogarty International Center (1F05TWO3577-01-BI-5)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Immunology and Microbiology › Microbiology › Escherichia coli research studies
- Health Sciences › Medicine › Hematology › Iron Metabolism and Disorders
- Keywords
- Fur repressor, iron regulation, promoter, DNase I footprinting, repressor binding sites, consensus sequence, siderophore biosynthesis, Escherichia coli
- MeSH terms
- Bacterial Proteins, Chromosome Deletion, Cloning, Molecular, Bacteriocin Plasmids, Escherichia coli, Gene Expression Regulation, Hydroxamic Acids, Iron, Operator Regions, Genetic, Operon, Promoter Regions, Genetic, Recombinant Fusion Proteins, Repressor Proteins, Transcription Factors
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review