The DOI matches its Crossref record.
Identification of genes and gene products whose expression is activated during nitrogen-limited growth in Bacillus subtilis
Open accessAbstract
The levels of urease and asparaginase were elevated 25- and 20-fold, respectively, in extracts of Bacillus subtilis cells grown in medium containing nitrogen sources that are poor sources of ammonium (NH4+) compared with the levels seen in extracts of cells grown in medium containing nitrogen sources that are good sources of NH4+. To determine whether a collection of genes whose expression responds to nitrogen availability could be isolated, a library of Tn917-lacZ insertions was screened for nitrogen-regulated beta-galactosidase expression. Two fusion strains were identified. beta-Galactosidase expression was 26- and 4,000-fold higher, respectively, in the nrg-21::Tn917-lacZ and the nrg-29::Tn917-lacZ insertion strains during NH4(+)-restricted growth than during growth on nitrogen sources that are good sources of NH4+. PBS1 transduction analysis showed that the nrg-21::Tn917-lacZ insertion mapped between gutB and purB and that the nrg-29::Tn917-lacZ insertion mapped between degSU and spoIID. The repression of expression of these four gene products during growth on good sources of NH4+ required the wild-type glutamine synthetase protein but not the glutamine synthetase regulatory protein, GlnR.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Despite being a non-essential amino acid, glutamate is the one amino acid that B. subtilis prefers [27,28].”
From Optimization of Bacillus subtilis PW12 biomass production using RSM: a preliminary study towards single-cell protein production for aquaculture (2024) · cites this paper as [28]
Citations
Cites
Still being checked.
Research works printed but not linked: 25
- Atkinson , M. R. , L. V. Wray , and S. H. Fisher . 1990 . Regulation of the histidine and proline degradative enzymes by amino acid availability in Bacillus subtilis . J. Bacteriol. 172 : 4758 - 4765 . · DOI
- Bender , R. A. , P. M. Snyder , R. Bueno , M. Quinto , and B. Magasanik . 1983 . Nitrogen regulation system of Klebsiella aerogenes: the nac gene . J. Bacteriol. 156 : 444 446. · DOI
- Bohannon D. E. and A. L. Sonenshein. Positive regulation of glutamate biosynthesis in Bacillus subtilis. J. Bacteriol. 171: 4718-4727. · DOI
- Dedonder , R. A. , J. -A. Lepesant , J. Lepesant-Kejzlarova , A. Biflault , M. Steinmetz , and F. Kunst . 1977 . Construction of a kit of Referencestrains for rapid genetic mapping in Bacillus subtilis 168 . Appl. Environ. Microbiol. 33 : 989 - 993 . · DOI
- Dunlop , P. C. , and R. J. Roon . 1975 . L-Asparaginase of Saccharomyces cervisiae: an extracellular enzyme . J. Bacteriol. 122 : 1017 - 1024 . · DOI
- Fisher , S. H. , and A. L. Sonenshein . 1977 . Glutamine-requiring mutants of Bacillus subtilis . Biochem. Biophys. Res. Commun. 79 : 987 - 995 . · DOI
- Fisher , S. H. , and A. L. Sonenshein . 1984 . Bacillus subtilis glutamine synthetase mutants pleiotropically altered in glucose catabolite repression . J. Bacteriol. 157 : 612 - 621 . · DOI
- Gaur , N. K. , E. Dubnau , and I. Smith . 1986 . Characterization of a cloned Bacillus subtilis gene which inhibits sporulation in multiple copies . J. Bacteriol. 168 : 860 - 869 . · DOI
- Golden , K. J. , and R. W. Bernlohr . 1985 . Nitrogen catabolite repression of the L-asparaginase of Bacillus licheniformis . J. Bacteriol. 164 : 938 - 940 . · DOI
- Harwood , C. R. , and S. Baumberg . 1977 . Arginine hydroxamate-resistant mutants of Bacillus subtilis with altered control of arginine metabolism . J. Gen. Microbiol. 100 : 177 - 188 . · DOI
- Hoch , J. A. , M. Barat , and C. Anagnostopoulos . 1967 . Transformation and transduction in recombination defective mutants of Bacillus subtilis . J. Bacteriol. 93 : 1925 - 1937 . · DOI
- Lowry , 0. H. , N. J. Rosebrough , A. L. Farr , and R. J. Randall . 1951 . Protein measurement with the Folin phenol reagent . J. Biol. Chem. 193 : 265 - 275 . · DOI · Paper page
- Magasanik B. and F. C. Neidhardt. 1987. Regulation of carbon and nitrogen utilization p. 1318-1325. In F. C. Neidhart J. L. Ingraham K. B. Low B. Magasanik M. Schaechter and H. Umbarger (ed.) Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology Washington D.C.
- Msadek , T. , F. Kunst , D. Henner , A. Klier , G. Rapoport , and R. Dedonder . 1990 . Signal transduction pathway controlling synthesis of a class of degradative enzymes in Bacillus subtilis: expression of the regulatory genes and analysis of mutations in degS and degU . J. Bacteriol. 172 : 824 - 834 . · DOI
- Pan , F. L. , and J. G. Coote . 1979 . Glutamine synthetase and glutamate synthase activities during growth and sporulation in Bacillus subtilis . J. Gen. Microbiol. 112 : 373 - 377 . · DOI
- Piggot P. J. 1989. Revised genetic map of Bacillus subtilis 168 p. 1-42. In I. Smith R. A. Slepecky and P. Setlow (ed.) Regulation of procaryotic development. American Society for Microbiology Washington D.C.
- Rebello , J. L. , and N. Strauss . 1969 . Regulation of synthesis of glutamine synthetase in Bacillus subtilis . J. Bacteriol. 98 : 683 - 688 . · DOI
- Reitzer L. J. and B. Magasanik. 1987. Ammonium assimilation and the biosynthesis of glutamine glutamate aspartate asparagine L-alanine and D-alanine p. 302-320. In F. C. Neidhart J. L. Ingraham K. B. Low B. Magasanik M. Schaechter and H. Umbarger (ed.) Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology Washington D.C.
- Schreier , H. J. , S. W. Brown , K. D. Hirschi , J. F. Nomeilini , and A. L. Sonenshein . 1989 . Regulation of Bacillus subtilis glutamine synthetase gene expression by the product of the glnR gene . J. Mol. Biol. 210 : 51 - 63 . · DOI
- Schreier , H. J. , T. M. Smith , and R. W. Bernlohr . 1982 . Regulation of nitrogen catabolic enzymes in Bacillus spp . J. Bacteriol. 151 : 971 - 975 . · DOI
- Schreier , H. J. , and A. L. Sonenshein . 1986 . Altered regulation of the glnA gene in glutamine synthetase mutants of Bacillus subtilis . J. Bacteriol. 167 : 35 - 43 . · DOI
- Sonenshein A. L. 1989. Metabolic regulation of sporulation and other stationary-phase phenomena p. 109-130. In I. Smith R. A. Slepecky and P. Setlow (ed.) Regulation of procaryotic development. American Society for Microbiology Washington D.C.
- Sonenshein , A. L. , B. Cami , J. Brevet , and R. Cote . 1974 . Isolation and characterization of rifampicin-resistant mutants of Bacillus subtilis with altered sporulation properties . J. Bacteriol. 120 : 253 - 265 . · DOI
- Wong , B. L. , and C. R. Shobe . 1974 . Single-step purification of urease by affinity chromatography . Can. J. Microbiol. 20 : 623 - 630 . · DOI
- Youngman P. 1987. Plasmid vectors for recovering and exploiting Tn 917 transpositions in Bacillus and other Gram-positive bacteria p. 79-103. In K. G. Hardy (ed.) Plasmids: a practical approach. IRL Press Oxford.
Cited by
Gracious, M., & Nandakumar, S. (2024) · Journal of Applied Biology & Biotechnology · doi:10.7324/jabb.2024.177031 · Cited by 2
“Despite being a non-essential amino acid, glutamate is the one amino acid that B. subtilis prefers [27,28].”
Metadata
- Authors
- Atkinson, M. R., & Fisher, S. H.
- Affiliations
- Boston University (US)
- Venue
- Journal of Bacteriology
- Publisher
- American Society for Microbiology
- Published
- 1991-01
- Volume
- 173
- Issue
- 1
- Pages
- 23-27
- ISSN
- 0021-9193 (ISSN-L)
- 1098-5530
- PMC
- PMC207151
- OpenAlex
- W2125914860
- Cited by
- 93
- References
- 0
- Citations by year
- 2024: 2 · 2023: 2 · 2022: 4 · 2021: 3 · 2020: 3 · 2018: 3 · 2017: 1 · 2015: 4 · 2014: 5 · 2012: 2
- FWCI
- 2.57
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Bacteriology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Science Foundation (8896127)
- National Institutes of Health (2s07rr005380-30)
- National Center for Research Resources (RRO5380-26)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Molecular Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Keywords
- nitrogen limitation, nitrogen regulation, Bacillus subtilis, urease, L-asparaginase, glutamine synthetase, GlnR, beta-galactosidase fusion, gene expression regulation, ammonium
- MeSH terms
- Ammonia, Asparaginase, Bacillus subtilis, beta-Galactosidase, Crosses, Genetic, DNA Transposable Elements, Genes, Bacterial, Genotype, Glutamate-Ammonia Ligase, Nitrogen, Recombination, Genetic, Transduction, Genetic, Urease, Gene Expression Regulation, Bacterial
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.