The DOI matches its Crossref record; 41 of the 42 references it cites were found in a registry or an index.
Production of actinorhodin-related "blue pigments" by Streptomyces coelicolor A3(2)
Open accessAbstract
The genetically well-known strain Streptomyces coelicolor A3(2) produces the pH indicator (red/blue) antibiotic actinorhodin, but not all the "blue pigment" produced by this strain is actinorhodin. When the organism was subjected to various nutrient limitations (ammonium, nitrate, phosphate, or trace elements), and also during growth cessation caused by a relatively low medium pH, blue pigment production was initiated but the pigment and its location varied. At pH 4.5 to 5.5, significant formation of actinorhodin occurred and was located exclusively intracellularly. At pH 6.0 to 7.5 a different blue pigment was produced intracellularly as well as extracellularly. It was purified and identified as gamma-actinorhodin (the lactone form of actinorhodin). Analysis of act mutants of S. coelicolor A3(2) confirmed that both pigments are derived from the act biosynthetic pathway. Mutants with lesions in actII-ORF2, actII-ORF3, or actVA-ORF1, previously implicated or suggested to be involved in actinorhodin export, were impaired in production of gamma-actinorhodin, suggesting that synthesis of gamma-actinorhodin from actinorhodin is coupled to its export from the cell. However, effects on the level of actinorhodin production were also found in some mutants.
Overview
AI snapshot
Written from the paper’s full text.
TL;DR
Streptomyces coelicolor A3(2) produces a second blue pigment besides actinorhodin, identified as gamma-actinorhodin (the lactone form of actinorhodin), whose production and cellular location depend on nutrient limitation and medium pH. Mutants in genes previously implicated in actinorhodin export were impaired in gamma-actinorhodin production, suggesting its synthesis from actinorhodin is coupled to export.
Key findings
- Under various nutrient limitations (ammonium, nitrate, phosphate, or trace elements) and during growth cessation caused by relatively low medium pH, blue pigment production was initiated, but the pigment and its location varied.
- At pH 4.5 to 5.5, significant formation of actinorhodin occurred and was located exclusively intracellularly.
- At pH 6.0 to 7.5, a different blue pigment was produced intracellularly as well as extracellularly; it was purified and identified as gamma-actinorhodin (the lactone form of actinorhodin).
- Analysis of act mutants confirmed both pigments derive from the act biosynthetic pathway; mutants with lesions in actII-ORF2, actII-ORF3, or actVA-ORF1 (previously implicated or suggested in actinorhodin export) were impaired in gamma-actinorhodin production, suggesting synthesis of gamma-actinorhodin from actinorhodin is coupled to its export from the cell, though effects on actinorhodin production levels were also found in some mutants.
Methods
- Design: S. coelicolor A3(2) was subjected to various nutrient limitations (ammonium, nitrate, phosphate, trace elements) and to growth cessation caused by relatively low medium pH; blue pigment production, identity, and location were examined.
- The pH 6.0–7.5 pigment was purified and identified as gamma-actinorhodin; act mutants of S. coelicolor A3(2) were analyzed to test pathway origin and the role of export-related genes.
- Main analysis details beyond the abstract are not available in the provided text (only the abstract and reference list are given; the full text is a PDF link).
Limitations
- Not stated in the paper (only the abstract is available in the provided text).
- Evident from the text: the provided material is the abstract and reference list only, so experimental detail, quantitative data beyond the reported pH ranges, and any limitations discussed in the full article cannot be assessed.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
10 Own result · 1 Own interpretation · 1 No basis given
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“However, effects on the level of actinorhodin production were also found in some mutants.”
plaincorrelational- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: unclear — It is unclear whether the paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“but not all the”
plain- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
- Rests on an assumption: Streptomyces coelicolor A3(2) produces the pH indicator (red/blue) antibiotic actinorhodin.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“It was purified and identified as gamma-actinorhodin (the lactone form of actinorhodin).”
plain- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Mutants with lesions in actII-ORF2, actII-ORF3, or actVA-ORF1, previously implicated or suggested to be involved in actinorhodin export, were impaired in production of gamma-actinorhodin”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“When the organism was subjected to various nutrient limitations (ammonium, nitrate, phosphate, or trace elements), and also during growth cessation caused by a relatively low medium pH, blue pigment production was initiated but the pigment and its location varied.”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“At pH 4.5 to 5.5, significant formation of actinorhodin occurred and was located exclusively intracellularly.”
plain- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“When the organism was subjected to various nutrient limitations (ammonium, nitrate, phosphate, or trace elements), and also during growth cessation caused by a relatively low medium pH, blue pigment production was initiated but the pigment and its location varied.”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“At pH 6.0 to 7.5 a different blue pigment was produced intracellularly as well as extracellularly.”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“When the organism was subjected to various nutrient limitations (ammonium, nitrate, phosphate, or trace elements), and also during growth cessation caused by a relatively low medium pH, blue pigment production was initiated but the pigment and its location varied.”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Analysis of act mutants of S. coelicolor A3(2) confirmed that both pigments are derived from the act biosynthetic pathway.”
plaindirect- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
- Based: passes — The paper gives a reason why it holds.
The paper relies on this without support.
Streptomyces coelicolor A3(2) produces the pH indicator (red/blue) antibiotic actinorhodin.
“The genetically well-known strain Streptomyces coelicolor A3(2) produces the pH indicator (red/blue) antibiotic actinorhodin”
The paper relies on this without support.
Mutants with lesions in actII-ORF2, actII-ORF3, or actVA-ORF1 are involved in actinorhodin export.
“Mutants with lesions in actII-ORF2, actII-ORF3, or actVA-ORF1, previously implicated or suggested to be involved in actinorhodin export”
Citations
Cites
Genetic manipulation of Streptomyces : a laboratory manual
Hopwood, D. A. (1985) · Medical Entomology and Zoology · Cited by 1,780
Self-citationCashel, M. (1996) · Medical Entomology and Zoology · Cited by 860
Malpartida, F., & Hopwood, D. A. (1984) · Nature · doi:10.1038/309462a0 · Cited by 405
Self-citationFernández‐Moreno, M. Á., Caballero, J. L., Hopwood, D. A., et al. (1991) · Cell · doi:10.1016/0092-8674(91)90120-n · Cited by 361
Self-citationMalpartida, F., & Hopwood, D. A. (1992) · PubMed · Cited by 360
Self-citationPhosphate metabolism and cellular regulation in microorganisms
Torriani-Gorini, A. (1988) · International Journal of Biochemistry · doi:10.1016/0020-711x(88)90241-8 · Cited by 276
Dispersed growth of Streptomyces in liquid culture
Hobbs, G., Frazer, C. M., Gardner, D. J., Cullum, J., & Oliver, S. G. (1989) · Applied Microbiology and Biotechnology · doi:10.1007/bf00258408 · Cited by 276
Fernández‐Moreno, M. Á., Martínez, E., Boto, L., et al. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)41772-3 · Cited by 225
Self-citationGramajo, H. C., Takano, E., & Bibb, M. J. (1993) · Molecular Microbiology · doi:10.1111/j.1365-2958.1993.tb01174.x · Cited by 202
Genetics of Actinorhodin Biosynthesis by Streptomyces coelicolor A3(2)
Rudd, B. A. M., & HOPWOOD, D. A. (1979) · Journal of General Microbiology · doi:10.1099/00221287-114-1-35 · Cited by 198
Self-citation
Research works printed but not linked: 3
- Bergmeyer H. U. and H.-O. Beutler. 1985. Ammonia p. 454-461. In H. U. Bergmeyer J. Bergmeyer and M. Grassl (ed.) Methods of enzymatic analysis 3rd ed. vol. 8. VCH Publishers New York.
- Christiansen P. 1970. Isolierung Strukturermittlung und absolute Konfiguration neuer Actinorhodine. Ph.D. thesis. University of Göttingen Göttingen Germany.
- McNicolas C. 1991. Ph.D. thesis. University of Bristol Bristol United Kingdom.
Cited by
Sorted by citations
Complex lipid determines tissue-specific replication of Mycobacterium tuberculosis in mice
Cox, J. S., Chen, B., McNeil, M., & Jacobs, W. R. (1999) · Nature · doi:10.1038/47042 · Cited by 746
“tuberculosis genome as well as ActIII-ORF3, a membrane protein required for secretion of the antibiotic actinorhodin in Streptomyces coelicolor”
BackgroundCuthbertson, L., & Nodwell, J. R. (2013) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00018-13 · Cited by 562
CRISPR-Cas9 Based Engineering of Actinomycetal Genomes
Tong, Y., Charusanti, P., Zhang, L., Weber, T., & Lee, S. Y. (2015) · ACS Synthetic Biology · doi:10.1021/acssynbio.5b00038 · Cited by 439
Contribution of theMycobacterium tuberculosisMmpL Protein Family to Virulence and Drug Resistance
Domenech, P., Reed, M. B., & Barry, C. E. (2005) · Infection and Immunity · doi:10.1128/iai.73.6.3492-3501.2005 · Cited by 362
“paired in -actinorhodin production (2).”
Forty years of genetics with Streptomyces: from in vivo through in vitro to in silico
Hopwood, D. A. (1999) · Microbiology · doi:10.1099/00221287-145-9-2183 · Cited by 269
Self-citationMmpL8 is required for sulfolipid-1 biosynthesis and Mycobacterium tuberculosis virulence
Converse, S. E., Mougous, J. D., Leavell, M. D., Leary, J. A., Bertozzi, C. R., & Cox, J. S. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1030024100 · Cited by 250
Shima, J., Hesketh, A. R., Okamoto, S., Kawamoto, S., & Ochi, K. (1996) · Journal of Bacteriology · doi:10.1128/jb.178.24.7276-7284.1996 · Cited by 244
Chakraburtty, R., & Bibb, M. J. (1997) · Journal of Bacteriology · doi:10.1128/jb.179.18.5854-5861.1997 · Cited by 213
The dynamic architecture of the metabolic switch in Streptomyces coelicolor
Nieselt, K., Battke, F., Herbig, A., Bruheim, P., Wentzel, A., Jakobsen, Ø. M., Sletta, H., Alam, M. T., Merlo, M. E., Moore, J. D., et al. (2010) · BMC Genomics · doi:10.1186/1471-2164-11-10 · Cited by 199
Self-citationNature’s Palette: The Search for Natural Blue Colorants
Newsome, A. G., Culver, C. A., & van Breemen, R. B. (2014) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf501419q · Cited by 191
Mycelium Differentiation and Antibiotic Production in Submerged Cultures ofStreptomyces coelicolor
Manteca, Á., Álvarez-Fernández, R., Salazar, N., et al. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.02715-07 · Cited by 166
“Antibiotic quantification. Undecylprodigiosin and actinorhodin were quantified spectrophotometrically according to Tsao et al. (57) and Bystrykh et al. ( 7 ).”
MethodBiosynthesis of polyketides (other than actinomycete macrolides)
Rawlings, B. J., Rawlings, B. J., & Rawlings, B. J. (1999) · Natural Product Reports · doi:10.1039/a900566h · Cited by 164
The Role of MmpL8 in Sulfatide Biogenesis and Virulence of Mycobacterium tuberculosis
Domenech, P., Reed, M. B., Dowd, C. S., Manca, C., Kaplan, G., & Barry, C. E. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m400324200 · Cited by 163
Ichinose, K., Bedford, D. J., Tornus, D., Bechthold, A., Bibb, M. J., Revill, W. P., Floss, H. G., & Hopwood, D. A. (1998) · Chemistry & Biology · doi:10.1016/s1074-5521(98)90292-7 · Cited by 151
Self-citationAntibiotic Overproduction in Streptomyces coelicolor A3(2) Mediated by Phosphofructokinase Deletion
Borodina, I., Siebring, J., Zhang, J., Smith, C. P. S., van Keulen, G., Dijkhuizen, L., & Nielsen, J. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m803105200 · Cited by 146
Self-citationGottelt, M., Kol, S., Gomez‐Escribano, J. P., Bibb, M. J., & Takano, E. (2010) · Microbiology · doi:10.1099/mic.0.038281-0 · Cited by 146
Biosorption of nickel(II) and copper(II) ions from aqueous solution by Streptomyces coelicolor A3(2)
Öztürk, A., Artan, T., & Ayar, A. (2004) · Colloids and Surfaces B Biointerfaces · doi:10.1016/j.colsurfb.2003.11.008 · Cited by 142
Ryu, Y.-G., Butler, M. J., Chater, K. F., et al. (2006) · Applied and Environmental Microbiology · doi:10.1128/aem.01308-06 · Cited by 141
Initiation of actinorhodin export in Streptomyces coelicolor
Tahlan, K., Ahn, S. K., Sing, A. D., Bodnaruk, T. D., Willems, A. R., Davidson, A. R., & Nodwell, J. R. (2006) · Molecular Microbiology · doi:10.1111/j.1365-2958.2006.05559.x · Cited by 135
Gomez‐Escribano, J. P., & Bibb, M. J. (2013) · Journal of Industrial Microbiology & Biotechnology · doi:10.1007/s10295-013-1348-5 · Cited by 142
Xu, G., Wang, J., Wang, L., et al. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.143081 · Cited by 133
Jain, M., & Cox, J. S. (2005) · PLoS Pathogens · doi:10.1371/journal.ppat.0010002 · Cited by 125
“Likewise, an RND transporter in Streptomyces coelicolor, ActII-ORF3, is also involved in the biogenesis of a polyketide, c-actinorhodin [32].”
Santos‐Beneit, F., Rodríguez‐García, A., Sola‐Landa, A., et al. (2009) · Molecular Microbiology · doi:10.1111/j.1365-2958.2009.06624.x · Cited by 123
“coelicolor physiology have limited their focus to Act (Doull and Vining, 1990; Ozergin-Ulgen and Mavituna, 1993; Bystrykh et al., 1996; Melzoch et al., 1997), but there is very limited information on phosphate control of Red biosynthesis (Hobbs et al.”
BackgroundMultiple Pathways for Triacylglycerol Biosynthesis in Streptomyces coelicolor
Arabolaza, A. L., Rodrı́guez, E., Altabe, S., Álvarez, H. M., & Gramajo, H. C. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.02638-07 · Cited by 120
“absorption coefficient at 640 nm of 25,320 (6).”
BackgroundSüsstrunk, U., Pidoux, J., Taubert, S., Ullmann, A., & Thompson, C. J. (1998) · Molecular Microbiology · doi:10.1046/j.1365-2958.1998.01033.x · Cited by 119
Tanaka, Y., Kasahara, K., Hirose, Y., Murakami, K., Kugimiya, R., & Ochi, K. (2013) · Journal of Bacteriology · doi:10.1128/jb.00147-13 · Cited by 115
Lee, N., Kim, W., Chung, J., Lee, Y., Cho, S., Jang, K., Kim, S. C., Palsson, B. Ø., & Cho, B. (2020) · The ISME Journal · doi:10.1038/s41396-020-0594-6 · Cited by 105
Lu, Y., Wang, L., Xue, Y., et al. (2008) · Biochemical Engineering Journal · doi:10.1016/j.bej.2008.09.009 · Cited by 103
Watrous, J. D., Hendricks, N. G., Meehan, M. J., & Dorrestein, P. C. (2010) · Analytical Chemistry · doi:10.1021/ac9027388 · Cited by 102
Thakur, D., Bora, T. C., Bordoloi, G. N., et al. (2009) · Journal de Mycologie Médicale · doi:10.1016/j.mycmed.2009.04.001 · Cited by 99
Allenby, N., Laing, E., Bucca, G., et al. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks766 · Cited by 95
Wright, J. S., Lyon, G. J., George, E. A., Muir, T. W., & Novick, R. P. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0404039101 · Cited by 95
Bringmann, G., Günther, C., Ochse, M., et al. (2001) · Fortschritte der Chemie Organischer Naturstoffe/Fortschritte der Chemie organischer Naturstoffe/Progress in the chemistry of organic natural products · doi:10.1007/978-3-7091-6227-9_1 · Cited by 95
Engineering of Primary Carbon Metabolism for Improved Antibiotic Production in Streptomyces lividans
Butler, M. J., Bruheim, P., Jovetic, S., et al. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.10.4731-4739.2002 · Cited by 94
Onaka, H., Nakagawa, T., & Horinouchi, S. (1998) · Molecular Microbiology · doi:10.1046/j.1365-2958.1998.00832.x · Cited by 93
“After septa have been formed at regular intervals along the hyphae, long chains of spores are formed (Chater, 1984; 1989).”
Guthrie, E. P., Flaxman, C. S., White, J., Hodgson, D. A., Bibb, M. J., & Chater, K. F. (1998) · Microbiology · doi:10.1099/00221287-144-3-727 · Cited by 89
Bishop, A., Fielding, S., Dyson, P. J., et al. (2004) · Genome Research · doi:10.1101/gr.1710304 · Cited by 88
Secondary Metabolites Produced during the Germination of Streptomyces coelicolor
Čihák, M., Kameník, Z., Šmídová, K., et al. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.02495 · Cited by 84
Hesketh, A. R., Sun, J., & Bibb, M. J. (2001) · Molecular Microbiology · doi:10.1046/j.1365-2958.2001.02221.x · Cited by 82
“Actinorhodin was determined spectrophotometrically according to the method of Bystrykh et al. (1996) .”
MethodMicrobial metabolic exchange in 3D
Watrous, J. D., Phelan, V. V., Hsu, C., Moree, W. J., Duggan, B. M., Alexandrov, T., & Dorrestein, P. C. (2013) · The ISME Journal · doi:10.1038/ismej.2012.155 · Cited by 81
“subtilis colony (Bystrykh et al., 1996; Kodani et al., 2004; Yang et al., 2009; Watrous et al., 2010).”
BackgroundMmpS4 promotes glycopeptidolipids biosynthesis and export in Mycobacterium smegmatis
Deshayes, C., Bach, H., Euphrasie, D., Attarian, R., Coureuil, M., Sougakoff, W., Laval, F., Av‐Gay, Y., Daffé, M., Etienne, G., et al. (2010) · Molecular Microbiology · doi:10.1111/j.1365-2958.2010.07385.x · Cited by 81
“RND protein ActII-orf3 from the Gram-positive Streptomyces coelicolor is involved in the biosynthesis of a blue pigment, g-actinorhodin, a heterocyclic antibiotic synthesized by a polyketide synthase (Bystrykh et al., 1996).”
BackgroundExtracellular Streptomyces vesicles: amphorae for survival and defence
Schrempf, H., Koebsch, I., Walter, S., Engelhardt, H., & Meschke, H. (2011) · Microbial Biotechnology · doi:10.1111/j.1751-7915.2011.00251.x · Cited by 80
“An analysis for the abundance of actinorhodin and its related compounds was performed as described earlier (Bystrykh et al., 1996).”
MethodDu, D., Wang, L., Tian, Y., et al. (2015) · Scientific Reports · doi:10.1038/srep08740 · Cited by 77
Production of Specialized Metabolites by Streptomyces coelicolor A3(2)
van Keulen, G., & Dyson, P. J. (2014) · Advances in applied microbiology · doi:10.1016/b978-0-12-800259-9.00006-8 · Cited by 77
Lian, W., Jayapal, K. P., Charaniya, S., et al. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-56 · Cited by 74
Minas, W., Bailey, J. E., & Duetz, W. A. (2000) · Antonie van Leeuwenhoek · doi:10.1023/a:1010254013352 · Cited by 72
“Biochemical assays and biomass determination Actinorhodin concentrations were determined spectrophotometrically as described previously (Bystrykh et al. 1996).”
Manikprabhu, D., & Lingappa, K. (2013) · Journal of Pharmacy Research · doi:10.1016/j.jopr.2013.01.022 · Cited by 71
Xu, Y., Willems, A. R., Au-yeung, C., et al. (2012) · mBio · doi:10.1128/mbio.00191-12 · Cited by 70
Shin, J., Singh, A. K., Cheon, D., et al. (2010) · Journal of Bacteriology · doi:10.1128/jb.00965-10 · Cited by 70
Hesketh, A. R., Kock, H., Mootien, S., & Bibb, M. J. (2009) · Molecular Microbiology · doi:10.1111/j.1365-2958.2009.06941.x · Cited by 68
de Crécy‐Lagard, V., Servant, P., Viala, J. P. M., et al. (1999) · Molecular Microbiology · doi:10.1046/j.1365-2958.1999.01364.x · Cited by 68
Subsurface Biomolecular Imaging of Streptomyces coelicolor Using Secondary Ion Mass Spectrometry
Vaidyanathan, S., Fletcher, J. S., Goodacre, R., Lockyer, N. P., Micklefield, J., & Vickerman, J. C. (2008) · Analytical Chemistry · doi:10.1021/ac701921e · Cited by 66
Zhang, H., Zhan, J., Su, K., et al. (2005) · Food Chemistry · doi:10.1016/j.foodchem.2004.12.028 · Cited by 65
Esnault, C., Dulermo, T., Smirnov, A., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-00259-9 · Cited by 65
Willems, A. R., Tahlan, K., Taguchi, T., Zhang, K., Lee, Z. Z., Ichinose, K., Junop, M. S., & Nodwell, J. R. (2008) · Journal of Molecular Biology · doi:10.1016/j.jmb.2007.12.061 · Cited by 66
Rioseras, B., López-García, M. T., Yagüe, P., et al. (2013) · Bioresource Technology · doi:10.1016/j.biortech.2013.10.068 · Cited by 64
“Undecylprodigiosin and actinorhodin were quantified spectrophotometrically according to Tsao et al. (1985) and Bystrykh et al. (1996).”
Genome plasticity in Streptomyces: identification of 1 Mb TIRs in the S. coelicolor A3(2) chromosome
Weaver, D. T., Karoonuthaisiri, N., Tsai, H., et al. (2004) · Molecular Microbiology · doi:10.1111/j.1365-2958.2003.03920.x · Cited by 63
“However, subtle physiological differences certainly exist, as exemplified by variation in expression of the actinorhodin gene cluster (Bystrykh et al., 1996).”
Self-citationPeng, Q., Gao, G., Lü, J., Long, Q., Chen, X., Zhang, F., Xu, M., Liu, K., Wang, Y., Deng, Z., et al. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.03042 · Cited by 62
Synthetic Biology in Streptomyces Bacteria
Medema, M. H., Breitling, R., & Takano, E. (2011) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/b978-0-12-385075-1.00021-4 · Cited by 58
“A second blue pigment, gamma-actinorhodin, is also known to be produced by the same gene cluster (Bystrykh et al., 1996).”
BackgroundKallifidas, D., Jiang, G., Ding, Y., et al. (2018) · Microbial Cell Factories · doi:10.1186/s12934-018-0874-2 · Cited by 56
Carbon Flux Distribution in Antibiotic-Producing Chemostat Cultures of Streptomyces lividans
Avignone-Rossa, C. A., White, J. L., Kuiper, A., Postma, P. W., Bibb, M. J., & de Mattos, M. J. T. (2002) · Metabolic Engineering · doi:10.1006/mben.2001.0217 · Cited by 54
Parajuli, N., Hung, T. V., Ishida, K., et al. (2005) · Research in Microbiology · doi:10.1016/j.resmic.2005.03.005 · Cited by 52
Regional organization of gene expression in Streptomyces coelicolor
Karoonuthaisiri, N., Weaver, D. T., Huang, J., Cohen, S. N., & Kao, C. M. (2005) · Gene · doi:10.1016/j.gene.2005.03.042 · Cited by 51
Actinorhodin is a redox‐active antibiotic with a complex mode of action against G ram‐positive cells
Mak, S., & Nodwell, J. R. (2017) · Molecular Microbiology · doi:10.1111/mmi.13837 · Cited by 51
Streptomyces coelicolor as an Expression Host for Heterologous Gene Clusters
Gomez‐Escribano, J. P., & Bibb, M. J. (2012) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/b978-0-12-404634-4.00014-0 · Cited by 49
Cruz, R. D., Gao, Y., Penumetcha, S., et al. (2010) · Journal of Bacteriology · doi:10.1128/jb.00916-10 · Cited by 49
Sin, G., Ödman, P., Petersen, N., Lantz, A. E., & Gernaey, K. V. (2008) · Biotechnology and Bioengineering · doi:10.1002/bit.21869 · Cited by 47
Stagliano, K. W., Emadi, A., Lu, Z., Malinakova, H. C., Twenter, B. M., Yu, M. L., Holland, L. E., Rom, A. M., Harwood, J. S., Amin, R., et al. (2006) · Bioorganic & Medicinal Chemistry · doi:10.1016/j.bmc.2006.04.034 · Cited by 48
Schlimpert, S., & Elliot, M. A. (2023) · Journal of Bacteriology · doi:10.1128/jb.00153-23 · Cited by 46
Natural blue pigments and bikaverin
dos Santos, M. C., & Bicas, J. L. (2020) · Microbiological Research · doi:10.1016/j.micres.2020.126653 · Cited by 44
γ Actinorhodin a natural and attorney source for synthetic dye to detect acid production of fungi
Manikprabhu, D., & Lingappa, K. (2013) · Saudi Journal of Biological Sciences · doi:10.1016/j.sjbs.2013.01.004 · Cited by 43
Antibiotic export: transporters involved in the final step of natural product production
Severi, E., & Thomas, G. H. (2019) · Microbiology · doi:10.1099/mic.0.000794 · Cited by 43
Le, T. B. K., Fiedler, H., den Hengst, C. D., et al. (2009) · Molecular Microbiology · doi:10.1111/j.1365-2958.2009.06735.x · Cited by 42
Sulheim, S., Kumelj, T., van Dissel, D., Salehzadeh‐Yazdi, A., Du, C., van Wezel, G. P., Nieselt, K., Almaas, E., Wentzel, A., & Kerkhoven, E. J. (2020) · iScience · doi:10.1016/j.isci.2020.101525 · Cited by 39
Khannapho, C., Zhao, H., Bonde, B. K., Kierzek, A. M., Avignone-Rossa, C. A., & Bushell, M. E. (2008) · Metabolic Engineering · doi:10.1016/j.ymben.2008.06.003 · Cited by 41
Autologous DNA mobilization and multiplication expedite natural products discovery from bacteria
Xie, F., Zhao, H., Liu, J., Yang, X.-L., Neuber, M., Agrawal, A. A., Kaur, A., Herrmann, J. E., Kalinina, O. V., Wei, X., et al. (2024) · Science · doi:10.1126/science.abq7333 · Cited by 40
Wentzel, A., Bruheim, P., Øverby, A., et al. (2012) · BMC Systems Biology · doi:10.1186/1752-0509-6-59 · Cited by 40
Streptomyces-Derived Bioactive Pigments: Ecofriendly Source of Bioactive Compounds
Sarmiento-Tovar, A. A., Silva, L., Sánchez-Suárez, J., & Díaz, L. E. (2022) · Coatings · doi:10.3390/coatings12121858 · Cited by 45
“Thus, between some of the columns used are SephadexG-50 [66,67], silica gel columns [61,85], Kromasil ODS C-18 columns [86], Sephadex LH-20 [87,91,103,104], Zorbax ODS C18 [97], Silica-coated glass plates [97], silica-gel-coated aluminum sheets [99], and DEAE-Sepharose columns [100].”
BackgroundMethodAcidic pH shock induces the expressions of a wide range of stress-response genes
Kim, Y. J., Moon, M. H., Song, J. Y., et al. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-604 · Cited by 38
Kim, Y. J., Song, J. Y., Moon, M. H., et al. (2007) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-007-1083-9 · Cited by 37
Effects of extracellular ATP on the physiology ofStreptomyces coelicolorA3(2)
Li, M., Kim, T.-J., Kwon, H., et al. (2008) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2008.01248.x · Cited by 36
Species‐specific residues calibrate SoxR sensitivity to redox‐active molecules
Sheplock, R., Recinos, D. A., Mackow, N., Dietrich, L. E. P., & Chander, M. (2012) · Molecular Microbiology · doi:10.1111/mmi.12101 · Cited by 34
“All chemicals were purchased from Sigma, with the exception of PCA which was purchased from Princeton Biomolecular Research, and g-Act which was extracted from S. coelicolor cells as described by Bystrykh et al. (1996).”
Structural and mechanistic diversity of multidrug transporters
Mousa, J. J., & Bruner, S. D. (2016) · Natural Product Reports · doi:10.1039/c6np00006a · Cited by 36
Zhu, Y., Shang, X.-Y., Li, Y., et al. (2019) · Food Chemistry · doi:10.1016/j.foodchem.2019.125600 · Cited by 35
Streptomyces-based cell factories for production of biomolecules and bioactive metabolites
El‐Naggar, N. E. (2021) · Elsevier eBooks · doi:10.1016/b978-0-12-821477-0.00011-8 · Cited by 40
How Streptomyces lividans uses oils and sugars as mixed substrates
Peacock, L. M., Ward, J. M., Ratledge, C., Dickinson, F. M., & Ison, A. P. (2002) · Enzyme and Microbial Technology · doi:10.1016/s0141-0229(02)00278-8 · Cited by 35
Zhu, Y., Zhang, P., Zhang, J., Wang, J., Lü, Y., & Pang, X. (2020) · Applied and Environmental Microbiology · doi:10.1128/aem.01201-20 · Cited by 35
A framework to analyze multiple time series data: A case study with Streptomyces coelicolor
Mehra, S., Lian, W., Jayapal, K. P., Charaniya, S., Sherman, D. H., & Hu, W. (2005) · Journal of Industrial Microbiology & Biotechnology · doi:10.1007/s10295-005-0034-7 · Cited by 34
Yang, Y., Joo, H., Lee, K., et al. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.9.5050-5055.2005 · Cited by 34
McLean, T. C., Lo, R., Tschowri, N., Hoskisson, P. A., Al‐Bassam, M. M., Hutchings, M. I., & Som, N. F. (2019) · Microbiology · doi:10.1099/mic.0.000817 · Cited by 32
Banchio, C., & Gramajo, H. C. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.9.4240-4246.2002 · Cited by 32
Govindarajan, G., Santhi, V. S., & Jebakumar, S. R. D. (2014) · Biologicals · doi:10.1016/j.biologicals.2014.08.003 · Cited by 32
Actinorhodin production byStreptomyces coelicolorA3(2) in iron-restricted media
Coisne, S., Béchet, M., & Blondeau, R. (1999) · Letters in Applied Microbiology · doi:10.1046/j.1365-2672.1999.00509.x · Cited by 32
Pawlik, K., Kotowska, M., & Kolesiński, P. (2010) · Microbial Physiology · doi:10.1159/000321501 · Cited by 31
Phosphopantetheinyl transferase inhibition and secondary metabolism
Foley, T. L., Young, B. S., & Burkart, M. D. (2009) · FEBS Journal · doi:10.1111/j.1742-4658.2009.07425.x · Cited by 35
New ΦBT1 site-specific integrative vectors with neutral phenotype in Streptomyces
González-Quiñónez, N., López-García, M. T., Yagüe, P., et al. (2016) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-015-7271-0 · Cited by 30
Hassan, M. A., El‐Naggar, M. Y., & Said, W. (2001) · Egyptian Journal of Biology · Cited by 30
A possible role of poly-3-hydroxybuiyric acid in antibiotic production inStreptomyces
Verma, S., Bhatia, Y., Valappil, S. P., et al. (2002) · Archives of Microbiology · doi:10.1007/s00203-002-0500-9 · Cited by 30
Rioseras, B., Shliaha, P. V., Gorshkov, V., Yagüe, P., López-García, M. T., González-Quiñónez, N., Kovalchuk, S. I., Rogowska-Wrzesińska, A., Jensen, O. N., & Manteca, Á. (2018) · Molecular & Cellular Proteomics · doi:10.1074/mcp.ra117.000515 · Cited by 29
Impact of Malic Enzymes on Antibiotic and Triacylglycerol Production in Streptomyces coelicolor
Rodrı́guez, E., Navone, L., Casati, P., et al. (2012) · Applied and Environmental Microbiology · doi:10.1128/aem.00838-12 · Cited by 29
Metadata
- Authors
- Bystrykh, L. V., Fernández-Moreno, M. A., Herrema, J. K., Malpartida, F., Hopwood, D. A., & Dijkhuizen, L.
- Affiliations
- University of Groningen (NL)
- Department of Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, The Netherlands.
- Venue
- Journal of Bacteriology
- Publisher
- American Society for Microbiology
- Published
- 1996-04
- Volume
- 178
- Issue
- 8
- Pages
- 2238-2244
- ISSN
- 0021-9193 (ISSN-L)
- 1098-5530
- PMC
- PMC177931
- OpenAlex
- W2142314320
- Cited by
- 245
- References
- 42
- Citations by year
- 2026: 9 · 2025: 5 · 2024: 10 · 2023: 7 · 2022: 10 · 2021: 7 · 2020: 11 · 2019: 11 · 2018: 7 · 2017: 9 · 2016: 9 · 2015: 9 · 2014: 11 · 2013: 12 · 2012: 10
- FWCI
- 4.80
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Bacteriology (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (submittedVersion)
- PubMed Central (submittedVersion)
- University of Groningen research database (University of Groningen / Centre for Information Technology) (submittedVersion)
- University of Groningen research database (University of Groningen / Centre for Information Technology) (submittedVersion, other-oa)
- Default journal
- Topics
- Life Sciences › Immunology and Microbiology › Applied Microbiology and Biotechnology › Microbial Natural Products and Biosynthesis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biotechnology › Microbial Metabolism and Applications
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Keywords
- actinorhodin, Streptomyces coelicolor A3(2), blue pigments, acid-base indicators, lactone formation, nutrient limitation, low pH, intracellular pigments
- MeSH terms
- Benzoisochromanequinones, Anthraquinones, Anti-Bacterial Agents, Biological Transport, Hydrogen-Ion Concentration, Lactones, Mutation, Pigments, Biological, Spectrophotometry, Streptomyces
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
A language model drew the claims from the paper on 2026-10-13, under version 3 of the claim definition (model deepseek-v4.1-flash, prompt extract-v3).
A second model labelled each claim on 2026-10-13 (model jev-1.13-20260917, definition revision gold-guideline-v0.2).
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review