The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Infectious cDNA Clone of the Epidemic West Nile Virus from New York City
Open accessAbstract
We report the first full-length infectious clone of the current epidemic, lineage I, strain of West Nile virus (WNV). The full-length cDNA was constructed from reverse transcription-PCR products of viral RNA from an isolate collected during the year 2000 outbreak in New York City. It was cloned into plasmid pBR322 under the control of a T7 promoter and stably amplified in Escherichia coli HB101. RNA transcribed from the full-length cDNA clone was highly infectious upon transfection into BHK-21 cells, resulting in progeny virus with titers of 1 × 10 9 to 5 × 10 9 PFU/ml. The cDNA clone was engineered to contain three silent nucleotide changes to create a Sty I site (C to A and A to G at nucleotides [nt] 8859 and 8862, respectively) and to knock out an Eco RI site (A to G at nt 8880). These genetic markers were retained in the recovered progeny virus. Deletion of the 3′-terminal 199 nt of the cDNA transcript abolished the infectivity of the RNA. The plaque morphology, in vitro growth characteristics in mammalian and insect cells, and virulence in adult mice were indistinguishable for the parental and recombinant viruses. The stable infectious cDNA clone of the epidemic lineage I strain will provide a valuable experimental system to study the pathogenesis and replication of WNV.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Lanciotti, R. S., Roehrig, J. T., Deubel, V., Smith, J., Parker, M., Steele, K., Crise, B., Volpe, K. E., Crabtree, M. B., Scherret, J. H., et al. (1999) · Science · doi:10.1126/science.286.5448.2333 · Cited by 1,593
Cited by
Molecular biology of flaviviruses
Lindenbach, B. D., & Rice, C. M. (2003) · Advances in Virus Research · doi:10.1016/s0065-3527(03)59002-9 · Cited by 853
Pijlman, G. P., Funk, A., Kondratieva, N., Leung, J., Torres, S., van der Aa, L., Liu, W. J., Palmenberg, A. C., Shi, P.-Y., Hall, R. A., et al. (2008) · Cell Host & Microbe · doi:10.1016/j.chom.2008.10.007 · Cited by 490
Self-citationStructure and Function of Flavivirus NS5 Methyltransferase
Zhou, Y., Ray, D., Zhao, Y., Dong, H., Ren, S., Li, Z., Guo, Y., Bernard, K. A., Shi, P.-Y., & Li, H. (2007) · Journal of Virology · doi:10.1128/jvi.02704-06 · Cited by 406
Self-citationRay, D., Shah, A., Tilgner, M., Guo, Y., Zhao, Y., Dong, H., Deas, T. S., Zhou, Y., Li, H., & Shi, P.-Y. (2006) · Journal of Virology · doi:10.1128/jvi.00814-06 · Cited by 386
Self-citationC6/36 Aedes albopictus Cells Have a Dysfunctional Antiviral RNA Interference Response
Brackney, D. E., Scott, J. C., Sagawa, F., Woodward, J. E., Miller, N. A., Schilkey, F. D., Mudge, J., Wilusz, J., Olson, K. E., Blair, C. D., et al. (2010) · PLoS Neglected Tropical Diseases · doi:10.1371/journal.pntd.0000856 · Cited by 326
Metadata
- Authors
- Shi, P.-Y., Tilgner, M., Lo, M. K., Kent, K. A., & Bernard, K. A.
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2002-06-15
- Volume
- 76
- Issue
- 12
- Pages
- 5847-5856
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- OpenAlex
- W2171529151
- Cited by
- 204
- References
- 1
- FWCI
- 8.66
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Infectious cDNA Clone of the Epidemic West Nile Virus from New York City. https://app.cochat.ai/papers/10.1128/jvi.76.12.5847-5856.2002
- The paper
- Shi, P.-Y., Tilgner, M., Lo, M. K., Kent, K. A., & Bernard, K. A. (2002). Infectious cDNA Clone of the Epidemic West Nile Virus from New York City. Journal of Virology. https://doi.org/10.1128/jvi.76.12.5847-5856.2002
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.