Destabilization of Interleukin-6 mRNA Requires a Putative RNA Stem-Loop Structure, an AU-Rich Element, and the RNA-Binding Protein AUF1
Open accessAbstract
Interleukin-6 mRNA is unstable and degraded with a half-life of 30 min. Instability determinants can entirely be attributed to the 3' untranslated region. By grafting segments of this region to stable green fluorescent protein mRNA and subsequent scanning mutagenesis, we have identified two conserved elements, which together account for most of the instability. The first corresponds to a short noncanonical AU-rich element. The other, 80 nucleotides further 5', comprises a sequence predicted to form a stem-loop structure. Neither element alone was sufficient to confer full instability, suggesting that they might cooperate. Overexpression of myc-tagged AUF1 p37 and p42 isoforms as well as suppression of endogenous AUF1 by RNA interference stabilized interleukin-6 mRNA. Both effects required the AU-rich instability element. Similarly, the proteasome inhibitor MG132 stabilized interleukin-6 mRNA probably through an increase of AUF1 levels. The mRNA coimmunoprecipitated specifically with myc-tagged AUF1 p37 and p42 in cell extracts but only when the AU-rich instability element was present. These results indicate that AUF1 binds to the AU-rich element in vivo and promotes IL-6 mRNA degradation.
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IL-6 mRNA has an extremely short half-life directly related to message stability.
“Assays for IL-6 mRNA levels in vitro focused on the first 30 min after HGF stimulation due to the extremely short half-life of IL-6 mRNAs that is directly related to message stability [17].”
From Synthesis of IL-6 by Hepatocytes Is a Normal Response to Common Hepatic Stimuli (2014) · cites this paper as [17]
The decrease in IL-6 in the media over time is likely due to IL-6's short half-life.
“with the decrease likely due to its short half-life [17]”
From Synthesis of IL-6 by Hepatocytes Is a Normal Response to Common Hepatic Stimuli (2014) · cites this paper as [17]
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References 76 · Cited by 146
- Authors
- Paschoud, S., Dogar, A. M., Kuntz, C., Grisoni-Neupert, B., Richman, L., & Kühn, L. C.
- Affiliations
- ISREC Foundation (CH)
- Swiss Institute for Experimental Cancer Research (ISREC), Genetics Unit
- ORCID
- Dogar, Afzal M.
- Venue
- Molecular and Cellular Biology
- Publisher
- Informa UK Limited
- Published
- 2006-11
- Volume
- 26
- Issue
- 22
- Pages
- 8228-8241
- ISSN
- 0270-7306 (ISSN-L)
- 1098-5549
- PMC
- PMC1636780
- OpenAlex
- W2121185475
- Cited by
- 146
- References
- 76
- Citations by year
- 2026: 2 · 2025: 6 · 2024: 5 · 2023: 6 · 2022: 2 · 2021: 5 · 2020: 5 · 2019: 7 · 2018: 4 · 2017: 5 · 2016: 10 · 2015: 10 · 2014: 11 · 2013: 9 · 2012: 15
- FWCI
- 2.85
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Molecular and Cellular Biology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Infoscience (Ecole Polytechnique Fédérale de Lausanne) (submittedVersion)
- Infoscience (Ecole Polytechnique Fédérale de Lausanne) (submittedVersion, cc-by-nc-nd)
- Funders
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Keywords
- mRNA stability, AU-rich elements, AUF1, RNA-binding proteins, 3' untranslated region, stem-loop structure, mRNA degradation, proteasome, MG132, RNA interference, RNA-protein interactions
- MeSH terms
- Heterogeneous Nuclear Ribonucleoprotein D0, Animals, Base Sequence, Chlorocebus aethiops, Molecular Sequence Data, RNA, RNA Processing, Post-Transcriptional, Sequence Homology, Nucleic Acid, Interleukin-6, Mutagenesis, Point Mutation, COS Cells, 3' Untranslated Regions, RNA Stability, Heterogeneous-Nuclear Ribonucleoprotein D, Proteasome Endopeptidase Complex, Green Fluorescent Proteins
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