Cited by 102Bacterial Genetics and BiotechnologyBiochemical and Structural CharacterizationAntimicrobial Resistance in Staphylococcus

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Imaging Bacterial Cell Wall Biosynthesis

Open access

Abstract

Peptidoglycan is an essential component of the cell wall that protects bacteria from environmental stress. A carefully coordinated biosynthesis of peptidoglycan during cell elongation and division is required for cell viability. This biosynthesis involves sophisticated enzyme machineries that dynamically synthesize, remodel, and degrade peptidoglycan. However, when and where bacteria build peptidoglycan, and how this is coordinated with cell growth, have been long-standing questions in the field. The improvement of microscopy techniques has provided powerful approaches to study peptidoglycan biosynthesis with high spatiotemporal resolution. Recent development of molecular probes further accelerated the growth of the field, which has advanced our knowledge of peptidoglycan biosynthesis dynamics and mechanisms. Here, we review the technologies for imaging the bacterial cell wall and its biosynthesis activity. We focus on the applications of fluorescent d-amino acids, a newly developed type of probe, to visualize and study peptidoglycan synthesis and dynamics, and we provide direction for prospective research.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1146/annurev-biochem-062917-012921

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 135

  1. 10.1111/j.1574-6976.2007.00094.x · DOI
  2. 10.1038/nrmicro2677 · DOI
  3. Garner EC, 2011, subtilis. Science, 333, 222, 10.1126/science.1203285 · DOI
  4. 10.1126/science.aak9973 · DOI
  5. 10.1371/journal.pbio.1002565 · DOI
  6. 10.1093/femsre/fuu012 · DOI
  7. 10.1016/j.tibtech.2013.01.012 · DOI
  8. 10.1007/978-1-4757-2519-3_1 · DOI
  9. 10.1107/S0021889887086916 · DOI
  10. Vernon-Parry KD., 2000, III-Vs Rev, 13, 40
  11. 10.1126/science.aab1576 · DOI
  12. 10.1111/j.1432-1033.1970.tb01137.x · DOI
  13. 10.1002/anie.201206749 · DOI
  14. 10.1007/s00253-011-3551-5 · DOI
  15. 10.7554/eLife.03678 · DOI
  16. 10.1128/JB.185.20.6112-6118.2003 · DOI
  17. 10.1111/j.1365-2958.2005.04535.x · DOI
  18. 10.1083/jcb.201304193 · DOI
  19. 10.1016/j.tcb.2004.11.009 · DOI
  20. 10.1038/nature05015 · DOI
  21. 10.1111/j.1365-2818.2012.03627.x · DOI
  22. 10.1016/S0022-5320(67)80059-5 · DOI
  23. Verwer RWH, 1978, J. Bacteriol., 136, 723, 10.1128/jb.136.2.723-729.1978 · DOI
  24. 10.1128/JB.185.11.3458-3468.2003 · DOI
  25. 10.1073/pnas.0808035105 · DOI
  26. 10.1016/bs.mim.2016.10.004 · DOI
  27. 10.1002/wnan.104 · DOI
  28. Ikai A., 2010, Nano/Micro Biotechnology, 47
  29. 10.1128/JB.181.22.6865-6875.1999 · DOI
  30. 10.1073/pnas.0804138105 · DOI
  31. 10.1128/JB.00910-12 · DOI
  32. 10.1186/1471-2180-12-298 · DOI
  33. 10.1126/science.1203466 · DOI
  34. 10.1101/gad.1732408 · DOI
  35. 10.1016/j.jmb.2013.12.016 · DOI
  36. 10.1111/j.1365-2958.2008.06486.x · DOI
  37. 10.1111/j.1365-2958.2011.07909.x · DOI
  38. 10.1126/science.1137395 · DOI · Paper page
  39. 10.1016/j.cell.2010.12.002 · DOI
  40. 10.1073/pnas.1102255108 · DOI
  41. 10.1073/pnas.0604503103 · DOI
  42. 10.1529/biophysj.108.128751 · DOI
  43. 10.1073/pnas.1301804110 · DOI
  44. 10.1146/annurev-micro-091213-113034 · DOI
  45. 10.1128/AAC.6.6.722 · DOI
  46. 10.1016/S0092-8674(03)00421-5 · DOI · Paper page
  47. 10.1099/00221287-135-3-657 · DOI
  48. 10.1073/pnas.0600829103 · DOI
  49. Sizemore RK, 1990, Appl. Environ. Microbiol., 56, 2245, 10.1128/aem.56.7.2245-2247.1990 · DOI
  50. 10.1073/pnas.1317174111 · DOI
  51. 10.1038/nchembio.2109 · DOI
  52. 10.1038/nprot.2014.197 · DOI
  53. 10.1126/science.1178123 · DOI
  54. 10.1021/ja2040656 · DOI
  55. 10.1111/j.1574-6976.2008.00105.x · DOI
  56. 10.1016/j.str.2012.04.005 · DOI
  57. 10.1128/JB.00025-08 · DOI
  58. 10.1099/mic.0.069211-0 · DOI
  59. 10.1128/MMBR.00022-11 · DOI
  60. Hsu Y-P, 2017, Chem. Sci., 290, 30540
  61. 10.1111/mmi.13593 · DOI
  62. 10.1074/jbc.M500895200 · DOI
  63. 10.7554/eLife.04601 · DOI
  64. 10.1126/science.aak9995 · DOI
  65. 10.1128/JB.00541-15 · DOI
  66. 10.1111/j.1365-2958.2007.05782.x · DOI
  67. Doyle RJ, 1988, Microbiol. Rev., 52, 554, 10.1128/mr.52.4.554-567.1988 · DOI
  68. Tomasz A, 1975, J. Biol. Chem., 250, 337, 10.1016/S0021-9258(19)42020-6 · DOI
  69. 10.1111/j.1749-6632.2012.06813.x · DOI
  70. Moulder JW., 1993, Infect. Agents Dis., 2, 87
  71. 10.1038/nature12892 · DOI
  72. Moulder JW, 1963, J. Bacteriol., 85, 707, 10.1128/jb.85.3.707-711.1963 · DOI
  73. 10.1126/science.282.5389.754 · DOI
  74. 10.1111/j.1365-2958.2005.04661.x · DOI
  75. 10.1007/s00203-011-0784-8 · DOI
  76. 10.1002/1521-3773(20010601)40:11<2004::AID-ANIE2004>3.0.CO;2-5 · DOI
  77. 10.1016/0163-7258(81)90030-9 · DOI
  78. 10.4161/cib.24561 · DOI
  79. 10.1038/nature12900 · DOI
  80. 10.1111/cmi.12024 · DOI
  81. 10.1016/j.micron.2010.09.003 · DOI
  82. 10.1038/nmeth929 · DOI
  83. 10.1126/science.1127344 · DOI
  84. 10.1038/nmeth.1258 · DOI
  85. 10.1371/journal.pone.0012680 · DOI
  86. Begemann I, 2016, Front. Synaptic Neurosci., 8, 1
  87. 10.1038/nature09802 · DOI
  88. 10.1038/nature17192 · DOI
  89. 10.1039/C6SC02500E · DOI
  90. 10.1016/S0092-8674(03)00421-5 · DOI · Paper page
  91. 10.1038/ncomms15015 · DOI
  92. 10.1002/anie.201503869 · DOI
  93. 10.1039/b007108k · DOI
  94. 10.1186/1754-1611-4-11 · DOI
  95. 10.1021/cb3004995 · DOI · Paper page
  96. 10.1021/ja505668f · DOI
  97. 10.1074/jbc.M115.683342 · DOI
  98. 100. Pidgeon SE, Fura JM, Leon W, Birabaharan M, Vezenov D, Pires MM. 2015. Metabolic profiling of bacteria by unnatural C-terminated d-amino acids. Angew. Chem. Int. Ed. Engl. 54: 6158–62 · DOI
  99. 10.1039/C5CC01693B · DOI
  100. 10.1038/ncomms3856 · DOI
  101. 103. Billings G, Ouzounov N, Ursell T, Desmarais SM, Shaevitz J, et al. 2014. De novo morphogenesis in L-forms via geometric control of cell growth. Mol. Microbiol. 93: 883–96 · DOI
  102. 10.1038/ncomms7878 · DOI
  103. 10.1371/journal.ppat.1005590 · DOI
  104. 10.1111/mmi.12201 · DOI
  105. 10.1074/jbc.M114.569624 · DOI
  106. 10.1128/JB.00827-13 · DOI
  107. 10.1128/JB.02094-14 · DOI
  108. 10.1038/ncomms9055 · DOI
  109. 10.1016/j.vascn.2015.03.005 · DOI
  110. 10.1128/JB.00896-15 · DOI
  111. 10.1111/mmi.13673 · DOI
  112. 10.1111/mmi.13572 · DOI
  113. 10.15252/embj.201696235 · DOI
  114. 10.1021/ja404640f · DOI
  115. 10.1128/mBio.01219-14 · DOI
  116. 10.1371/journal.pgen.1004275 · DOI
  117. 10.1038/nature13966 · DOI
  118. 10.1111/mmi.12745 · DOI
  119. 10.1371/journal.ppat.1004850 · DOI
  120. 10.1111/mmi.12906 · DOI
  121. 10.1111/1462-2920.12779 · DOI
  122. 10.1038/ncomms8281 · DOI
  123. 10.1038/nchembio.1689 · DOI
  124. 10.1371/journal.pone.0140523 · DOI
  125. 10.1111/mmi.13077 · DOI
  126. 10.1073/pnas.1610805113 · DOI
  127. 10.1038/ncomms12071 · DOI
  128. Mura A, 2016, J. Bacteriol., 199, e00608
  129. 10.1128/mBio.00908-16 · DOI
  130. 10.1128/JB.01034-15 · DOI
  131. 10.1038/ncomms12467 · DOI
  132. 10.1111/mmi.13629 · DOI
  133. 10.15252/embj.201695028 · DOI
  134. 10.1128/mBio.02102-16 · DOI
  135. 10.1038/s41598-017-01267-5 · DOI

Metadata

Authors
Radkov, A. D., Hsu, Y.-P., Booher, G., & VanNieuwenhze, M. S.
Affiliations
  • University of California, San Francisco (US)
  • Indiana University Bloomington (US)
Corresponding author
Radkov, Atanas D.
Venue
Annual Review of Biochemistry
Published
2018-06-20
Volume
87
Issue
1
Pages
991-1014
ISSN
  • 0066-4154 (ISSN-L)
  • 1545-4509
OpenAlex
W2794888367
Cited by
102
References
1
Citations by year
2026: 10 · 2025: 6 · 2024: 17 · 2023: 8 · 2022: 13 · 2021: 14 · 2020: 21 · 2019: 10 · 2018: 3
FWCI
1.66
Type
journal article
Language
en
Open access
Locations
  • Annual Review of Biochemistry (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
National Institute of General Medical Sciences (R01GM113172)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Structural Characterization
  • Health Sciences › Medicine › Infectious Diseases › Antimicrobial Resistance in Staphylococcus
Keywords
peptidoglycan biosynthesis, bacterial cell wall, molecular probes, cell division, cell elongation, peptidoglycan remodeling
MeSH terms
Amino Acids, Bacteria, Cell Wall, Fluorescent Dyes, Microscopy, Electron, Microscopy, Fluorescence, Peptidoglycan, Microscopy, Atomic Force

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review