The DOI matches its Crossref record; 25 of the 25 references it cites were found in a registry or an index.
Overview of BioCreative II gene mention recognition
Open accessAbstract
Nineteen teams presented results for the Gene Mention Task at the BioCreative II Workshop. In this task participants designed systems to identify substrings in sentences corresponding to gene name mentions. A variety of different methods were used and the results varied with a highest achieved F 1 score of 0.8721. Here we present brief descriptions of all the methods used and a statistical analysis of the results. We also demonstrate that, by combining the results from all submissions, an F score of 0.9066 is feasible, and furthermore that the best result makes use of the lowest scoring submissions.
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Gu, Y., Tinn, R., Cheng, H., Lucas, M., Usuyama, N., Liu, X., Naumann, T., Gao, J., & Poon, H. (2022) · ACM Transactions on Computing for Healthcare · doi:10.1145/3458754 · Cited by 2,170
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Habibi, M., Weber, L., Neves, M., Wiegandt, D. L., & Leser, U. (2017) · Bioinformatics · doi:10.1093/bioinformatics/btx228 · Cited by 542
Self-citationOpportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health
Tian, S., Jin, Q., Yeganova, L., Lai, P.-T., Zhu, Q., Chen, X., Yang, Y., Chen, Q., Kim, W., Comeau, D. C., et al. (2023) · Briefings in Bioinformatics · doi:10.1093/bib/bbad493 · Cited by 359
Metadata
- Authors
- Smith, L., Tanabe, L. K., Ando, R. J. N., Kuo, C.-J., Chung, I.-F., Hsu, C.-N., Lin, Y.-S., Klinger, R., Friedrich, C. M., Ganchev, K., Torii, M., Liu, H., Haddow, B., Struble, C. A., Povinelli, R. J., Vlachos, A., Baumgartner, W. A., Hunter, L., Carpenter, B., Tsai, R. T.-H., Dai, H.-J., Liu, F., Chen, Y., Sun, C., Katrenko, S., Adriaans, P., Blaschke, C., Torres, R., Neves, M., Nakov, P., Divoli, A., Maña-López, M., Mata, J., & Wilbur, W. J.
- Venue
- Genome Biology
- Published
- 2008-09-01
- Volume
- 9
- Issue
- S2
- Pages
- S2-S2
- ISSN
- 1465-6906 (ISSN-L)
- 1474-760X
- OpenAlex
- W2154142897
- Cited by
- 486
- References
- 25
- FWCI
- 9.06
- Type
- journal article
- Language
- en
- Open access
- gold
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- The paper
- Smith, L., Tanabe, L. K., Ando, R. J. N., Kuo, C.-J., Chung, I.-F., Hsu, C.-N., Lin, Y.-S., Klinger, R., Friedrich, C. M., Ganchev, K., Torii, M., Liu, H., Haddow, B., Struble, C. A., Povinelli, R. J., Vlachos, A., Baumgartner, W. A., Hunter, L., Carpenter, B., . . . Wilbur, W. J. (2008). Overview of BioCreative II gene mention recognition. Genome Biology. https://doi.org/10.1186/gb-2008-9-s2-s2
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