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Evaluating the Y chromosomal STR dating in deep-rooting pedigrees

Wang, Chuan-Chao, Li, Hui·2015·Investigative Genetics

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Research works printed but not linked: 22

  1. Wang CC, Li H. Inferring human history in East Asia from Y chromosomes. Investig Genet. 2013;4:11. · DOI
  2. Xue Y, Wang Q, Long Q, Ng BL, Swerdlow H, Burton J, et al. Human Y chromosome base-substitution mutation rate measured by direct sequencing in a deep-rooting pedigree. Curr Biol. 2009;19:1453–7. · DOI
  3. Y Chromosome Consortium. A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res. 2002;12:339–48. · DOI · Paper page
  4. Karafet TM, Mendez FL, Meilerman MB, Underhill PA, Zegura SL, Hammer MF. New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree. Genome Res. 2008;18:830–8. · DOI · Paper page
  5. Wang CC, Yan S, Li H. Surnames and the Y chromosomes. Commun Contemp Anthropol. 2010;4:26–33.
  6. Wei W, Ayub Q, Xue Y, Tyler-Smith C. A comparison of Y-chromosomal lineage dating using either resequencing or Y-SNP plus Y-STR genotyping. Forensic Sci Int Genet. 2013;7:568–72. · DOI
  7. Zhivotovsky LA, Underhill PA, Cinnioğlu C, Kayser M, Morar B, Kivisild T, et al. The effective mutation rate at Y chromosome short tandem repeats, with application to human population-divergence time. Am J Hum Genet. 2004;74:50–61. · DOI
  8. Zhivotovsky LA. Estimating divergence time with the use of microsatellite genetic distances: impacts of population growth and gene flow. Mol Biol Evol. 2001;18:700–9. · DOI
  9. Ramakrishnan U, Mountain JL. Precision and accuracy of divergence time estimates from STR and SNP-STR variation. Mol Biol Evol. 2004;21:1960–71. · DOI
  10. Sengupta S, Zhivotovsky LA, King R, Mehdi SQ, Edmonds CA, Chow CE, et al. Polarity and temporality of high-resolution y-chromosome distributions in India identify both indigenous and exogenous expansions and reveal minor genetic influence of Central Asian pastoralists. Am J Hum Genet. 2006;78:202–21. · DOI · Paper page
  11. Thomas MG, Skorecki K, Ben-Ami H, Parfitt T, Bradman N, Goldstein DB. Origins of old testament priests. Nature. 1998;394:138–40. · DOI
  12. Thomas MG, Parfitt T, Weiss DA, Skorecki K, Wilson JF, le Roux M, et al. Y chromosomes traveling south: the Cohen modal haplotype and the origins of the Lemba—the “Black Jews of Southern Africa”. Am J Hum Genet. 2000;66:674–86. · DOI
  13. Wilson JF, Weiss DA, Richards M, Thomas MG, Bradman N, Goldstein DB. Genetic evidence for different male and female roles during cultural transitions in the British Isles. Proc Natl Acad Sci U S A. 2001;98:5078–83. · DOI
  14. Behar DM, Thomas MG, Skorecki K, Hammer MF, Bulygina E, Rosengarten D, et al. Multiple origins of Ashkenazi Levites: Y chromosome evidence for both near Eastern and European ancestries. Am J Hum Genet. 2003;73:768–79. · DOI
  15. Wilson IJ, Weale ME, Balding DJ. Inferences from DNA data: population histories, evolutionary processes and forensic match probabilities. J R Stat Soc. 2003;116:155–88. · DOI
  16. Shi D, Yan C. Kinship and heritage of Ningbo Siming SHI clan. Commun Contemp Anthropol. 2013;7:100–4.
  17. Wang CC, Yan S, Han S, Jin L, Li H. Poyang CÀO clan has no genetic origin in the CÁO Cào clan. Commun Contemp Anthropol. 2012;6:14–6.
  18. Yan S, Wang CC, Li H, Li SL, Jin L. An updated tree of Y chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4. Eur J Hum Genet. 2011;19:1013–5. · DOI
  19. Wang C, Yan S, Hou Z, Fu W, Xiong M, Han S, et al. Present Y chromosomes reveal the ancestry of Emperor CAO Cao of 1800 years ago. J Hum Genet. 2012;57:216–8. · DOI
  20. Burgarella C. Navascue′s M. Mutation rate estimates for 110 Y chromosome STRs combining population and father-son pair data. Eur J Hum Genet. 2011;19:70–5. · DOI
  21. Shi W, Ayub Q, Vermeulen M, Shao RG, Zuniga S, van der Gaag K, et al. A world wide survey of human male demographic history based on Y-SNP and Y-STR datafrom the HGDP-CEPH populations. Mol Biol Evol. 2010;27:385–93. · DOI
  22. Xue Y, Zerjal T, Bao W, Zhu S, Shu Q, Xu J, et al. Male demography in East Asia: a north–south contrast in human population expansion times. Genetic. 2006;172:2431–9. · DOI

Cited by

Metadata

Authors
Wang, C.-C., & Li, H.
Venue
Investigative Genetics
Published
2015-05-28
Volume
6
Issue
1
ISSN
2041-2223
Cited by
9
References
2
Language
en

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