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Cited by 178Lipid Membrane Structure and BehaviorCellular Mechanics and InteractionsCaveolin-1 and cellular processes

The Giant Vesicle Book

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Elisa Parra‐Ortiz, David Needham·2019·CRC Press eBooks
DOI 10.1201/9781315152516
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Abstract

This practical manual gives the reader a toolbox for starting work with giant vesicles, including expert's tips on proper preparation methods, measurement, and characterization methods. The contents build from a simple model to use of vesicles as advanced membrane and cell system models. It also includes fundamentals for understanding vesicle structure, properties and behavior. Key Features - Provides a complete summary of the field, covering fundamental concepts, practical methods, core theory, and the most promising applications.

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  • GUVs are established models for lipid bilayer membranes, emulating cell membranes to some extent.

    “To validate our mechanism of electropore-facilitated membrane fusion, we examined the interactions of GUVs, which are established models for lipid bilayer membranes 41,42 , emulating cell membranes to some extent.”

    From Fusion of lipid membranes: an alternative pathway (2026) · cites this paper as [41]

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  1. Bowman W (1840) On the minute structure and movements voluntary muscle. Philosophical Transactions of the Royal Society of London, 130, 457-501.
  2. Danielli JF, Davson, H (1935) A contribution to the theory of permea- bility of thin films. Journal of Cellular and Comparative Physiology, 5(4), 495-508.
  3. Hooke R (1665) Micrographia: Or Some Physiological Descriptions of Minute Bodies Made by Magnifying Glasses. With Observations and Inquiries Thereupon. London, UK: J. Martyn and J. Allestry. Sjöstrand FS, Andersson-Cedergren E, Dewey MM (1958) The ultra- structure of the intercalated discs of frog, mouse and guinea pig cardiac muscle. Journal of Ultrastructure Research, 1(3), 271-287.
  4. Van Leeuwenhoek A (1677) Letter to Oldenburg dated 9 October 1676. Philosophical Transactions, 12, 831.
  5. Angelova M, Dimitrov DS (1988) A mechanism of liposome electrofor- mation. In: Trends in Colloid and Interface Science II (Degiorgio V, Ed.), pp. 59-67. Darmstadt, Germany: Steinkopff.
  6. Angelova MI (2000) Liposome electroformation. In: Giant Vesicles (Luisi PL, Walde P, Eds.), pp. 27-36. Chichester, UK: John Wiley & Sons.
  7. Angelova MI, Soléau S, Méléard P, Faucon F, Bothorel P (1992) Preparation of giant vesicles by external AC electric fields. Kinetics and applications. In: Trends in Colloid and Interface Science VI (Helm C, Lösche M, Möhwald H, Eds.), pp. 127-131. Darmstadt, Germany: Steinkopff.
  8. Campillo C, Sens P, Köster D, Pontani LL, Lévy D, Bassereau P, Nassoy P, Sykes C (2013) Unexpected membrane dynamics unveiled by membrane nanotube extrusion. Biophys J 104(6):1248-1256.
  9. The making of Carrara P, Stano P, Luisi PL (2012). Giant vesicles "colonies": A model for primitive cell communities. ChemBioChem 13(10):1497-1502.
  10. Fujiwara K, Yanagisawa M (2014) Generation of giant unilamellar liposomes containing biomacromolecules at physiological intracel- lular concentrations using hypertonic conditions. ACS Synth Biol 3(12):870-874.
  11. Funakoshi K, Suzuki H, Takeuchi S (2007). Formation of giant lipid vesiclelike compartments from a planar lipid membrane by a pulsed jet flow. J Am Chem Soc 129(42):12608-12609.
  12. Grotzky A, Altamura E, Adamcik J, Carrara P, Stano P, Mavelli F, Nauser T, Mezzenga R, Schluter AD, Walde P (2013) Structure and enzymatic properties of molecular dendronized polymer- enzyme conjugates and their entrapment inside giant vesicles. Langmuir 29(34):10831-10840.
  13. Guevorkian K, Manzi J, Pontani LL, Brochard-Wyart F, Sykes C (2015) Mechanics of biomimetic liposomes encapsulating an actin shell. Biophysi J 109(12):2471-2479.
  14. Hadorn M, Boenzli E, Sørensen, KT, De Lucrezia D, Hanczyc, MM, Yomo T (2013) Defined DNA-mediated assemblies of gene-expressing giant unilamellar vesicles. Langmuir 29(49):15309-15319.
  15. Harbich W, Helfrich W (1979). Alignment and opening of giant lecithin vesicles by electric fields. Zeitschrift für Naturforschung A 34(9):1063-1065.
  16. Harbich, W, Servuss, RM, Helfrich, W (1976). Optical studies of lecithin-membrane melting. Phys Lett A 57(3):294-296.
  17. Israelachvili, J N (2011). Intermolecular and Surface Forces. Burlington, MA: Academic Press.
  18. Karlsson M, Sott K, Davidson M, Cans AS, Linderholm P, Chiu D, Orwar O (2002). Formation of geometrically complex lipid nanotube-vesicle networks of higher-order topologies. Proc Natl Acad Sci USA 99(18):11573-11578.
  19. Kirchner SR, Ohlinger A, Pfeiffer T, Urban AS, Stefani FD, Deak A, Lutich AA, Feldmann J (2012). Membrane composition of jetted lipid vesicles: A Raman spectroscopy study. J Biophotonics 5(1):40-46.
  20. Kubatta EA, Rehage H (2009) Characterization of giant vesicles formed by phase transfer processes. Colloid Polym Sci 287(9):1117-1122.
  21. Liu YJ, Hansen, GP, Venancio-Marques A, Baigl, D (2013) Cell-free preparation of functional and triggerable giant proteoliposomes. ChemBioChem 14(17):2243-2247.
  22. Luisi PL, Walde P (Eds.) (2000) Giant vesicles, Perspectives in Supramolecular Chemistry. John Wiley & Sons Ltd., Chichester.
  23. Marsh, D (2013). Handbook of Lipid Bilayers. Boca Raton, FL: CRC Press.
  24. Méléard P, Bagatolli LA, Pott T (2009) Giant unilamellar vesicle electroformation: From lipid mixtures to native membranes under physiological conditions. In: Methods in Enzymology, Düzgüneş N (Ed). Vol 465 pp. 161-176. New York: Academic Press.
  25. Mueller P, Rudin DO, Tien HT, Wescott WC (1963) Methods for the formation of single bimolecular lipid membranes in aqueous solu- tion. J Phys Chem 67(2):534-535.
  26. Murrell M, Pontani LL, Guevorkian K, Cuvelier D, Nassoy P, Sykes C (2011). Spreading dynamics of biomimetic actin cortices. Biophys J 100(6):1400-1409.
  27. Natsume Y, Toyota T (2013) Giant vesicles containing microspheres with high volume fraction prepared by water-in-oil emulsion centrifugation. Chem Lett 42(3):295-297.
  28. Ohno M, Hamada T, Takiguchi K, Homma M (2009) Dynamic behavior of giant liposomes at desired osmotic pressures. Langmuir 25(19):11680-11685.
  29. Papahadjopoulos D, Miller N (1967). Phospholipid model membranes. I. Structural characteristics of hydrated liquid crystals. Biochim Biophys Acta Biomembr 135(4):624-638.
  30. Peters RJ, Nijemeisland M, van Hest JC (2015) Reversibly triggered protein-ligand assemblies in giant vesicles. Angewandte Chem 127(33):9750-9753.
  31. Pontani LL, Van der Gucht J, Salbreux G, Heuvingh J, Joanny JF, Sykes C (2009). Reconstitution of an actin cortex inside a liposome. Biophys J 96(1):192-198.
  32. Saito AC, Ogura T, Fujiwara K, Murata S, Shin-ichiro MN (2014) Introducing micrometer-sized artificial objects into live cells: A method for cell-giant unilamellar vesicle electrofusion. PloS One 9(9):e106853.
  33. Schmid EM, Richmond DL, Fletcher DA (2015) Reconstitution of proteins on electroformed giant unilamellar vesicles. In: Methods in Cell Biology (Ross J, Marshall WF, Eds.), Vol. 128 pp. 319-338. Academic Press.
  34. Stano P, Carrara P, Kuruma Y, de Souza TP, Luisi PL (2011). Compartmentalized reactions as a case of soft-matter biotechnol- ogy: Synthesis of proteins and nucleic acids inside lipid vesicles. J Mater Chem 21(47):18887-18902.
  35. Stano P, Rampioni G, Carrara P, Damiano L, Leoni L, Luisi PL (2012). Semi-synthetic minimal cells as a tool for biochemical ICT. Biosystems 109(1):24-34.
  36. Takiguchi K, Negishi M, Tanaka-Takiguchi Y, Homma M, Yoshikawa, K (2011) Transformation of actoHMM assembly confined in cell- sized liposome. Langmuir 27(18):11528-11535.
  37. Takiguchi K, Yamada A, Negishi M, Tanaka-Takiguchi Y, Yoshikawa, K (2008). Entrapping desired amounts of actin filaments and molecular motor proteins in giant liposomes. Langmuir 24(20):11323-11326.
  38. Torchilin V, Weissig V (2003) Liposomes: A Practical Approach. Oxford, UK: Oxford University Press.
  39. Toyota T, Ohguri N, Maruyama K, Fujinami M, Saga T, Aoki I (2012). Giant vesicles containing superparamagnetic iron oxide as biode- gradable cell-tracking MRI probes. Anal Chem 84(9):3952-3957.
  40. Walde P, Goto A, Monnard PA, Wessicken M, Luisi, PL (1994) Oparin's reactions revisited: Enzymic synthesis of poly (adenylic acid) in micelles and self-reproducing vesicles. J Am Chem Soc 116(17):7541-7547.
  41. Whittenton J, Harendra S, Pitchumani R, Mohanty K, Vipulanandan C, Thevananther S (2008). Evaluation of asymmetric liposomal nanoparticles for encapsulation of polynucleotides. Langmuir 24(16):8533-8540.
  42. Xiao Z, Huang N, Xu M, Lu Z, Wei Y (1998b). Novel preparation of asymmetric liposomes with inner and outer layer of different materials. Chem Lett 27(3):225-226.
  43. Xiao Z, Xu M, Li M, Lu Z, Wei Y (1998a). Preparation of asymmetric bilayer-vesicles with inner and outer monolayers composed of dif- ferent amphiphilic molecules. Supramol Sci 5(5-6):619-622.
  44. Grotzky A , Altamura E , Adamcik J , Carrara P , Stano P , Mavelli F , Nauser T , Mezzenga R , Schluter AD , Walde P (2013) Structure and enzymatic properties of molecular dendronized polymer enzyme conjugates and their entrapment inside giant vesicles. Langmuir 29(34):10831 10840.
  45. Guevorkian K , Manzi J , Pontani LL , Brochard-Wyart F , Sykes C (2015) Mechanics of biomimetic liposomes encapsulating an actin shell. Biophysi J 109(12):2471 2479.
  46. Hadorn M , Boenzli E , S rensen, KT , De Lucrezia D , Hanczyc, MM , Yomo T (2013) Defined DNA-mediated assemblies of gene-expressing giant unilamellar vesicles. Langmuir 29(49):15309 15319.
  47. Harbich W , Helfrich W (1979). Alignment and opening of giant lecithin vesicles by electric fields. Zeitschrift f r Naturforschung A 34(9):1063 1065.
  48. Harbich, W , Servuss, RM , Helfrich, W (1976). Optical studies of lecithin-membrane melting. Phys Lett A 57(3):294 296.
  49. Israelachvili, J N (2011). Intermolecular and Surface Forces. Burlington, MA: Academic Press.
  50. Karlsson M , Sott K , Davidson M , Cans AS , Linderholm P , Chiu D , Orwar O (2002). Formation of geometrically complex lipid nanotube- vesicle networks of higher-order topologies. Proc Natl Acad Sci USA 99(18):11573 11578.
  51. Kirchner SR , Ohlinger A , Pfeiffer T , Urban AS , Stefani FD , Deak A , Lutich AA , Feldmann J (2012). Membrane composition of jetted lipid vesicles: A Raman spectroscopy study. J Biophotonics 5(1):40 46.
  52. Kubatta EA , Rehage H (2009) Characterization of giant vesicles formed by phase transfer processes. Colloid Polym Sci 287(9):1117 1122.
  53. Liu YJ , Hansen, GP , Venancio-Marques A , Baigl, D (2013) Cell-free preparation of functional and triggerable giant proteoliposomes. ChemBioChem 14(17):2243 2247.
  54. Luisi PL , Walde P (Eds.) (2000) Giant vesicles, Perspectives in Supramolecular Chemistry. John Wiley & Sons Ltd., Chichester.
  55. Marsh, D (2013). Handbook of Lipid Bilayers. Boca Raton, FL: CRC Press.
  56. M l ard P , Bagatolli LA , Pott T (2009) Giant unilamellar vesicle electroformation: From lipid mixtures to native membranes under physiological conditions. In: Methods in Enzymology, D zg ne N (Ed). Vol 465 pp. 161 176. New York: Academic Press.
  57. Mueller P , Rudin DO , Tien HT , Wescott WC (1963) Methods for the formation of single bimolecular lipid membranes in aqueous solution. J Phys Chem 67(2):534 535.
  58. Murrell M , Pontani LL , Guevorkian K , Cuvelier D , Nassoy P , Sykes C (2011). Spreading dynamics of biomimetic actin cortices. Biophys J 100(6):1400 1409.
  59. Natsume Y , Toyota T (2013) Giant vesicles containing microspheres with high volume fraction prepared by water-in-oil emulsion centrifugation. Chem Lett 42(3):295 297.
  60. Ohno M , Hamada T , Takiguchi K , Homma M (2009) Dynamic behavior of giant liposomes at desired osmotic pressures. Langmuir 25(19):11680 11685.
  61. Papahadjopoulos D , Miller N (1967). Phospholipid model membranes. I. Structural characteristics of hydrated liquid crystals. Biochim Biophys Acta Biomembr 135(4):624 638.
  62. Peters RJ , Nijemeisland M , van Hest JC (2015) Reversibly triggered protein ligand assemblies in giant vesicles. Angewandte Chem 127(33):9750 9753.
  63. Pontani LL , Van der Gucht J , Salbreux G , Heuvingh J , Joanny JF , Sykes C (2009). Reconstitution of an actin cortex inside a liposome. Biophys J 96(1):192 198.
  64. Saito AC , Ogura T , Fujiwara K , Murata S , Shin-ichiro MN (2014) Introducing micrometer-sized artificial objects into live cells: A method for cell giant unilamellar vesicle electrofusion. PloS One 9(9):e106853.
  65. Schmid EM , Richmond DL , Fletcher DA (2015) Reconstitution of proteins on electroformed giant unilamellar vesicles. In: Methods in Cell Biology ( Ross J , Marshall WF Eds.), Vol. 128 pp. 319 338. Academic Press.
  66. Stano P , Carrara P , Kuruma Y , de Souza TP , Luisi PL (2011). Compartmentalized reactions as a case of soft-matter biotechnology: Synthesis of proteins and nucleic acids inside lipid vesicles. J Mater Chem 21(47):18887 18902.
  67. Stano P , Rampioni G , Carrara P , Damiano L , Leoni L , Luisi PL (2012). Semi-synthetic minimal cells as a tool for biochemical ICT. Biosystems 109(1):24
  68. Takiguchi K , Negishi M , Tanaka-Takiguchi Y , Homma M , Yoshikawa, K (2011) Transformation of actoHMM assembly confined in cell- sized liposome. Langmuir 27(18):11528 11535.
  69. Takiguchi K , Yamada A , Negishi M , Tanaka-Takiguchi Y , Yoshikawa, K (2008). Entrapping desired amounts of actin filaments and molecular motor proteins in giant liposomes. Langmuir 24(20):11323 11326.
  70. Torchilin V , Weissig V (2003) Liposomes: A Practical Approach. Oxford, UK: Oxford University Press.
  71. Toyota T , Ohguri N , Maruyama K , Fujinami M , Saga T , Aoki I (2012). Giant vesicles containing superparamagnetic iron oxide as biodegradable cell-tracking MRI probes. Anal Chem 84(9):3952 3957.
  72. Walde P , Goto A , Monnard PA , Wessicken M , Luisi, PL (1994) Oparin s reactions revisited: Enzymic synthesis of poly (adenylic acid) in micelles and self-reproducing vesicles. J Am Chem Soc 116(17):7541 7547.
  73. Whittenton J , Harendra S , Pitchumani R , Mohanty K , Vipulanandan C , Thevananther S (2008). Evaluation of asymmetric liposomal nanoparticles for encapsulation of polynucleotides. Langmuir 24(16):8533 8540.
  74. Xiao Z , Huang N , Xu M , Lu Z , Wei Y (1998b). Novel preparation of asymmetric liposomes with inner and outer layer of different materials. Chem Lett 27(3):225 226.
  75. Levental KR , Lorent JH , Lin X , Skinkle AD , Surma MA , Stockenbojer EA , Gorfe AA , Levental I (2016) Polyunsaturated lipids regulate membrane domain stability by tuning membrane order. Biophys J 110(8):1800 1810.
  76. Sezgin E , Grzybek M , Buhl T , Dirkx R , Gutmann T , Coskun U , Solimena M , Simons K , Levental I , Schwille P (2015) Adaptive lipid packing and bioactivity in membrane domains. PLoS One 10(4):e0123930.
  77. Garten M , Mosgaard LD , Bornschl gl T , Dieudonn S , Bassereau P , Toombes GES (2017) Whole-GUV patch clamping Proc. Natl. Acad. Sci. USA 114: 328 333.
  78. Geertsma ER , Nik Mahmood N a. B , Schuurman-Wolters GK , Poolman B (2008) Membrane reconstitution of ABC transporters and assays of translocator function. Nat Protoc 3:256 266.
  79. Lacoste D , Bassereau P (2014) An update on active membranes. In: Liposomes, Lipid Bilayers and Model Membranes: From Basic Research to Application, p. 271. Boca Raton, FL: CRC Press, Taylor & Francis Group.
  80. Arumugam S , Petrasek Z , Schwille P (2014) MinCDE exploits the dynamic nature of FtsZ filaments for its spatial regulation. Proceedings of the National Academy of Sciences of the United States of America 111:E1192 1200.
  81. Arumugam S , Petrov EP , Schwille P (2015) Cytoskeletal pinning controls phase separation in multicomponent lipid membranes. Biophysical Journal 108:1104 1113.
  82. Cabre EJ , Sanchez-Gorostiaga A , Carrara P , Ropero N , Casanova M , Palacios P , Stano P , Jimenez M , Rivas G , Vicente M (2013) Bacterial division proteins FtsZ and ZipA induce vesicle shrinkage and cell membrane invagination. The Journal of Biological Chemistry 288:26625 26634.
  83. Davis JQ , Bennett V (1986) Association of brain ankyrin with brain membranes and isolation of active proteolytic fragments of membrane- associated ankyrin-binding protein(s). The Journal of Biological Chemistry 261:16198 16206.
  84. Delatour V , Helfer E , Didry D , Le KH , Gaucher JF , Carlier MF , Romet-Lemonne G (2008) Arp2/3 controls the motile behavior of N- WASP-functionalized GUVs and modulates N-WASP surface distribution by mediating transient links with actin filaments. Biophysical Journal 94:4890 4905.
  85. Desai A , Mitchison TJ (1997) Microtubule polymerization dynamics. Annual Review of Cell and Developmental Biology 13:83 117.
  86. Doherty GJ , McMahon HT (2008) Mediation, modulation, and consequences of membrane-cytoskeleton interactions. Annual Review of Biophysics 37:65 95.
  87. Egile C , Loisel TP , Laurent V , Li R , Pantaloni D , Sansonetti PJ , Carlier MF (1999) Activation of the CDC42 effector N-WASP by the Shigella flexneri IcsA protein promotes actin nucleation by Arp2/3 complex and bacterial actin-based motility. The Journal of cell biology 146:1319 1332.
  88. Ehrig J , Petrov EP , Schwille P (2011) Near-critical fluctuations and cytoskeleton-assisted phase separation lead to subdiffusion in cell membranes. Biophysical Journal 100:80 89
  89. Fischer T , Vink RL (2011) Domain formation in membranes with quenched protein obstacles: lateral heterogeneity and the connection to universality classes. The Journal of Chemical Physics 134:055106.
  90. Geli MI , Riezman H (1998) Endocytic internalization in yeast and animal cells: Similar and different. Journal of Cell Science 111 (Pt 8):1031 1037.
  91. Gunning PW , Ghoshdastider U , Whitaker S , Popp D , Robinson RC (2015) The evolution of compositionally and functionally distinct actin filaments. Journal of Cell Science 128:2009 2019.
  92. Hanson PI , Roth R , Lin Y , Heuser JE (2008) Plasma membrane deformation by circular arrays of ESCRT-III protein filaments. The Journal of Cell Biology 180:389 402.
  93. Hardin J , Bertoni G , Kleinsmith LJ (2015). Becker s World of the Cell (8th ed.). New York: Pearson. pp. 422 446.
  94. Heinemann F , Schwille P (2011) Preparation of micrometer-sized free-standing membranes. Chemphyschem: A European Journal of Chemical Physics and Physical Chemistry 12:2568 2571.
  95. Heinemann F , Vogel SK , Schwille P (2013) Lateral membrane diffusion modulated by a minimal actin cortex. Biophysical Journal 104:1465 1475.
  96. Helfand BT , Chang L , Goldman RD (2004) Intermediate filaments are dynamic and motile elements of cellular architecture. Journal of Cell Science 117:133 141.
  97. Helfer E , Harlepp S , Bourdieu L , Robert J , MacKintosh FC , Chatenay D (2000) Microrheology of biopolymer-membrane complexes. Physical Review Letters 85:457 460.
  98. Helfer E , Harlepp S , Bourdieu L , Robert J , MacKintosh FC , Chatenay D (2001a) Viscoelastic properties of actin-coated membranes. Physical Review E, Statistical, Nonlinear, and Soft Matter Physics 63:021904.
  99. Helfer E , Harlepp S , Bourdieu L , Robert J , MacKintosh FC , Chatenay D (2001b) Buckling of actin-coated membranes under application of a local force. Physical Review Letters 87:088103.
  100. Helm CA , Knoll W , Israelachvili JN (1991) Measurement of ligand-receptor interactions. Proceedings of the National Academy of Sciences of the United States of America 88:8169 8173.
  101. Heuser JE , Kirschner MW (1980) Filament organization revealed in platinum replicas of freeze-dried cytoskeletons. The Journal of Cell Biology 86:212 234.
  102. Hussey PJ , Ketelaar T , Deeks MJ (2006) Control of the actin cytoskeleton in plant cell growth. Annual Review of Plant Biology 57:109 125.
  103. Jimenez M , Martos A , Vicente M , Rivas G (2011) Reconstitution and organization of Escherichia coli proto-ring elements (FtsZ and FtsA) inside giant unilamellar vesicles obtained from bacterial inner membranes. The Journal of Biological Chemistry 286:11236 11241.
  104. Limozin L , Sackmann E (2002) Polymorphism of cross-linked actin networks in giant vesicles. Physical Review Letters 89:168103.
  105. Liu AP , Fletcher DA (2006) Actin polymerization serves as a membrane domain switch in model lipid bilayers. Biophysical Journal 91:4064 4070.
  106. Lowe J , Amos LA (2009) Evolution of cytomotive filaments: The cytoskeleton from prokaryotes to eukaryotes. The International Journal of Biochemistry & Cell Biology 41:323 329.
  107. Machta BB , Papanikolaou S , Sethna JP , Veatch SL (2011) Minimal model of plasma membrane heterogeneity requires coupling cortical actin to criticality. Biophysical Journal 100:1668 1677.
  108. Manneville JB , Casella JF , Ambroggio E , Gounon P , Bertherat J , Bassereau P , Cartaud J , Antonny B , Goud B (2008) COPI coat assembly occurs on liquid-disordered domains and the associated membrane deformations are limited by membrane tension. Proceedings of the National Academy of Sciences of the United States of America 105:16946 16951.
  109. Matosevic S , Paegel BM (2011) Stepwise synthesis of giant unilamellar vesicles on a microfluidic assembly line. Journal of the American Chemical Society 133:2798 2800.
  110. Michie KA , Lowe J (2006) Dynamic filaments of the bacterial cytoskeleton. Annual Review of Biochemistry 75:467 492.
  111. Minton AP (1992) Confinement as a determinant of macromolecular structure and reactivity. Biophysical Journal 63:1090 1100.
  112. Moller-Jensen J , Jensen RB , Lowe J , Gerdes K (2002) Prokaryotic DNA segregation by an actin-like filament. The EMBO Journal 21:3119 3127.
  113. Osawa M , Erickson HP (2013) Liposome division by a simple bacterial division machinery. Proceedings of the National Academy of Sciences of the United States of America 110:11000 11004.
  114. Osawa M , Anderson DE , Erickson HP (2009) Curved FtsZ protofilaments generate bending forces on liposome membranes. The EMBO Journal 28:3476 3484.
  115. Pontani LL , van der Gucht J , Salbreux G , Heuvingh J , Joanny JF , Sykes C (2009) Reconstitution of an actin cortex inside a liposome. Biophysical Journal 96:192 198.
  116. Popp D , Narita A , Lee LJ , Ghoshdastider U , Xue B , Srinivasan R , Balasubramanian MK , Tanaka T , Robinson RC (2012) Novel actin- like filament structure from clostridium tetani. The Journal of Biological Chemistry 287:21121 21129.
  117. Popp D , Narita A , Ghoshdastider U , Maeda K , Maeda Y , Oda T , Fujisawa T , Onishi H , Ito K , Robinson RC (2010) Polymeric structures and dynamic properties of the bacterial actin AlfA. Journal of Molecular Biology 397:1031 1041.
  118. Raskin DM , de Boer PA (1999) MinDE-dependent pole-to-pole oscillation of division inhibitor MinC in Escherichia coli . Journal of Bacteriology 181:6419 6424.
  119. Schwille P (2015) Jump-starting life? Fundamental aspects of synthetic biology. The Journal of Cell Biology 210:687 690.
  120. Spudich JA , Watt S (1971) The regulation of rabbit skeletal muscle contraction. I. Biochemical studies of the interaction of the tropomyosin- troponin complex with actin and the proteolytic fragments of myosin. The Journal of biological chemistry 246:4866 4871.
  121. Stachowiak JC , Richmond DL , Li TH , Liu AP , Parekh SH , Fletcher DA (2008) Unilamellar vesicle formation and encapsulation by microfluidic jetting. Proceedings of the National Academy of Sciences of the United States of America 105:4697 4702.
  122. Szeto TH , Rowland SL , Rothfield LI , King GF (2002) Membrane localization of MinD is mediated by a C-terminal motif that is conserved across eubacteria, archaea, and chloroplasts. Proceedings of the National Academy of Sciences of the United States of America 99:15693 15698.
  123. Szeto TH , Rowland SL , Habrukowich CL , King GF (2003) The MinD membrane targeting sequence is a transplantable lipid-binding helix. The Journal of Biological Chemistry 278:40050 40056.
  124. Teather RM , Collins JF , Donachie WD (1974) Quantal behavior of a diffusible factor which initiates septum formation at potential division sites in Escherichia coli . Journal of Bacteriology 118:407 413.
  125. Veatch SL , Keller SL (2003a) Separation of liquid phases in giant vesicles of ternary mixtures of phospholipids and cholesterol. Biophysical Journal 85:3074 3083.
  126. Veatch SL , Keller SL (2003b) A closer look at the canonical Raft Mixture in model membrane studies. Biophysical Journal 84:725 726.
  127. Wachi M , Matsuhashi M (1989) Negative control of cell division by mreB, a gene that functions in determining the rod shape of Escherichia coli cells. Journal of Bacteriology 171:3123 3127.
  128. Walczak CE , Heald R (2008) Mechanisms of mitotic spindle assembly and function. International Review of Cytology 265:111 158.
  129. Wickstead B , Gull K (2011) The evolution of the cytoskeleton. The Journal of Cell Biology 194:513 525.
  130. Wollert T , Yang D , Ren X , Lee HH , Im YJ , Hurley JH (2009) The ESCRT machinery at a glance. Journal of Cell Science 122:2163 2166.
  131. Albertsson PA (1986) Partition of Cell Particles and Macromolecules: Separation and Purification of Biomolecules, Cell Organelles Membranes, and Cells in Aqueous Polymer Two-Phase Systems and Their Use in Biochemical Analysis and Biotechnology. 3 edition, New York: John Wiley & sons.
  132. Almeida PFF , Vaz WLC (1995) Lateral diffusion in membranes. In Lipowsky R , Sackmann E (Eds.), Structure and Dynamics of Membranes, Vol. 1A of Handbook of Biological Physics. Amsterdam, the Netherlands: Elsevier.
  133. Avalos-Padilla Y , Knorr RL , Javier-Reyna R , Garca-Rivera G , Lipowsky R , Dimova R , Orozco E (2018) The conserved ESCRT-III machinery participates in the phagocytosis of Entamoeba histolytica . Front. Cell. Infect. Microbiol., 8:53. doi:10.3389/fcimb.2018.00053. · DOI
  134. Cevc G , Marsh D (1987) Phospholipid Bilayers: Physical Principles and Models, New York: John Wiley & Sons.
  135. Dasgupta R , Miettinen M , Fricke N , Lipowsky R , Dimova R (2018) The glycolipid GM1 reshapes asymmetric biomembranes and giant vesicles by curvature generation. Proc. Nat. Acad. Sci. USA, 115:5756 5761.
  136. Helfrich W , Harbich W (1987) Equilibrium configurations of fluid membranes. In Meunier J , Langevin D , Boccara N (Ed.), Physics of Amphiphilic Layers, Vol. 21 of Springer Proceedings in Physics, 58 63. Berlin, Germany: Springer Berlin Heidelberg.
  137. Hu J , Lipowsky R , Weikl TR (2013) Binding constants of membrane-anchored receptors and ligands depend strongly on the nanoscale roughness of membranes. Proc. Nat. Acad. Sci. USA, 110:15283 15288.
  138. Klotzsch E , Sch tz GJ (2013) A critical survey of methods to detect plasma membrane rafts. Phil. Trans. R. Soc. B, 368:20120033.
  139. Knorr RL , Franzmann T , Feeney M , Frigerio L , Hyman A , Dimova R , Lipowsky R (under review) Wetting and molding of membranes by biomolecular condensates. Knorr RL , Lipowsky R , Dimova R (2015) Autophagosome closure requires membrane scission. Autophagy, 11:2134 2137.
  140. Korlach J , Schwille P , Webb W , Feigenson G (1999) Characterization of lipid bilayer phases by confocal microscopy and fluorescence correlation spectroscopy. Proc. Natl. Acad. Sci. USA, 96:8461 8466.
  141. Kornberg R , McConnell H (1971) Lateral diffusion of phospholipids in a vesicle membrane. Proc. Nat. Acad. Sci. USA, 68:2564 2568.
  142. Li Y , Lipowsky R , Dimova R (2011) Membrane nanotubes induced by aqueous phase separation and stabilized by spontaneous curvature. Proc. Nat. Acad, Sci. USA, 108:4731 4736.
  143. Miettinen M , Lipowsky, R (2019) Lipid bilayers with frequent flip-flops have tensionless leaflets. Nano Lett, in press.
  144. Rowlinson J , Widom B (1989) Molecular Theory of Capillarity. Oxford: Clarendon Press.
  145. Allain, J.-M. , Storm, C. , Roux, A. , Amar, M. B. and Joanny, J.-F. (2004). Fission of a multiphase membrane tube, Phys. Rev. Lett. 93(15): 158104.
  146. Allen, M. P. and Tildesley, D. J. (1991). Computer Simulation of Liquids, Clarendon Press, New York.
  147. Atilgan, E. and Sun, S. X. (2007). Shape transitions in lipid membranes and protein mediated vesicle fusion and fission, J. Chem. Phys. 126(9): 095102.
  148. Auth, T. and Gompper, G. (2003). Self-avoiding linear and star polymers anchored to membranes, Phys. Rev. E 68(5): 051801.
  149. Auth, T. and Gompper, G. (2005). Fluctuation spectrum of membranes with anchored linear and star polymers, Phys. Rev. E 72(3): 031904.
  150. Auth, T. and Gompper, G. (2009). Budding and vesiculation induced by conical membrane inclusions, Phys. Rev. E 80(3): 031901.
  151. Auth, T. , Safran, S. and Gov, N. S. (2007a). Filament networks attached to membranes: Cytoskeletal pressure and local bilayer deformation, New J. Phys. 9(11): 430.
  152. Auth, T. , Safran, S. and Gov, N. S. (2007b). Fluctuations of coupled fluid and solid membranes with application to red blood cells, Phys. Rev. E 76(5): 051910.
  153. Bahrami, A. H. , Lipowsky, R. and Weikl, T. R. (2012). Tubulation and aggregation of spherical nanoparticles adsorbed on vesicles, Phys. Rev. Lett. 109(18): 188102.
  154. Barbul, A. , Singh, K. , Horev Azaria, L. , Dasgupta, S. , Auth, T. , Korenstein, R. , and Gompper, G. (2018). Nanoparticle-Decorated Erythrocytes Reveal That Particle Size Controls the Extent of Adsorption, Cell Shape, and Cell Deformability. ACS Applied Nano Materials, 1(8), 3785 3799.
  155. Berger, M. J. and Colella, P. (1989). Local adaptive mesh refinement for shock hydrodynamics, J. Comp. Phys. 82(1): 64
  156. Betz, T. , Lenz, M. , Joanny, J.-F. and Sykes, C. (2009). ATP-dependent mechanics of red blood cells, Proc. Natl. Acad. Sci. USA 106: 15320 15325.
  157. Bickel, T. and Marques, C. M. (2002). Scale-dependent rigidity of polymer-ornamented membranes, Eur. Phys. J. E 9(4): 349 352.
  158. Bickel, T. , Marques, C. and Jeppesen, C. (2000). Pressure patches for membranes: The induced pinch of a grafted polymer, Phys. Rev. E 62(1): 1124.
  159. Boek, E. S. , den Otter, W. K. , Briels, W. J. and Iakovlev, D. (2004). Molecular-dynamics simulation of amphiphilic bilayer membranes and wormlike micelles: A multi-scale modeling approach to the design of viscoelastic surfactant solutions, Phil. Trans. R. Soc. Lond. A 362: 1625 1638.
  160. Brakke, K. A. (1992). The Surface Evolver, Exp. Math. 1(2): 141 165.
  161. Breidenich, M. , Netz, R. and Lipowsky, R. (2000). The shape of polymer-decorated membranes, EPL (Europhys. Lett.) 49(4): 431.
  162. Das, S. , Jenkins, J. and Baumgart, T. (2009). Neck geometry and shape transitions in vesicles with co-existing fluid phases: Role of Gaussian curvature stiffness vs. spontaneous curvature, EPL (Europhys. Lett.) 86(4): 48003.
  163. Dasgupta, S. , Auth, T. and Gompper, G. (2013). Wrapping of ellipsoidal nano-particles by fluid membranes, Soft Matter 9(22): 5473 5482.
  164. Dasgupta, S. , Auth, T. and Gompper, G. (2014). Shape and orientation matter for the cellular uptake of nonspherical particles, Nano Lett. 14(2): 687 693.
  165. Dupire, J. , Socol, M. and Viallat, A. (2012). Full dynamics of a red blood cell in shear flow, Proc. Natl. Acad. Sci. USA 109: 20808 20813.
  166. Eisenriegler, E. , Hanke, A. and Dietrich, S. (1996). Polymers interacting with spherical and rodlike particles, Phys. Rev. E 54(2): 1134.
  167. Fedosov, D. A. , Pan, W. , Caswell, B. , Gompper, G. and Karniadakis, G. E. (2011). Predicting blood rheology in silico, Proc. Natl. Acad. Sci. USA 108: 11772 11777.
  168. Feig, M. and Brooks III, C. L. (2004). Recent advances in the development and application of implicit solvent models in biomolecule simulations. Current opinion in structural biology, 14(2), 217 224.
  169. Fung, Y. C. (1993). Biomechanics: Mechanical Properties of Living Tissues, 2nd ed., Springer-Verlag, New York.
  170. Gelbart, W. M. , Ben-Shaul, A. and Roux, D. (Eds) (1994). Micelles, Membranes, Microemulsions, and Monolayers, Springer-Verlag, Berlin, Germany.
  171. Gompper, G. and Kroll, D. M. (2004). Triangulated-surface models of fluctuating membranes, in D. R. Nelson , T. Piran and S. Weinberg (Eds.), Statistical Mechanics of Membranes and Surfaces, 2nd ed, World Scientific, Singapore, Chapter 12, pp. 359 426.
  172. Gompper, G. and Noguchi, H. (2006). Coarse-grained and continuum models of membranes, in S. Bl gel , G. Gompper , E. Koch , H. M ller- Krumbhaar , R. Spatschek and R. G. Winkler (Eds.), Computational Condensed Matter Physics, Vol. 32 of Matter and Materials , Forschungszentrum J lich GmbH, J lich, Germany, p. B.9.
  173. Gompper, G. and Schick, M. (1994). Self-assembling amphiphilic systems, in C. Domb and J. Lebowitz (Eds.), Phase Transitions and Critical Phenomena, Vol. 16, Academic Press, London, UK, pp. 1 176.
  174. Goulian, M. , Bruinsma, R. and Pincus, P. (1993). Long-range forces in heterogeneous fluid membranes, EPL (Europhys. Lett.) 22(2): 145.
  175. Hanke, A. , Eisenriegler, E. and Dietrich, S. (1999). Polymer depletion effects near mesoscopic particles, Phys. Rev. E 59(6): 6853.
  176. Hansen, J. , Skalak, R. , Chien, S. and Hoger, A. (1997). Influence of network topology on the elasticity of the red blood cell membrane skeleton., Biophys. J. 72(5): 2369.
  177. Harmandaris, V. A. and Deserno, M. (2006). A novel method for measuring the bending rigidity of model lipid membranes by simulating tethers, J. Chem. Phys. 125(20): 204905.
  178. Hiergeist, C. and Lipowsky, R. (1996). Elastic properties of polymer-decorated membranes, J. Phys. (France) II 6(10): 1465 1481.
  179. Hsu, P.-C. , Bruininks, B. M. , Jefferies, D. , Cesar Telles de Souza, P. , Lee, J. , Patel, D. S. , Marrink, S. J. , Qi, Y. , Khalid, S. and Im, W. (2017). CHARMM-GUI Martini Maker for modeling and simulation of complex bacterial membranes with lipopolysaccharides, J. Comput. Chem. 38(27): 2354 2363.
  180. Hu, M. , Briguglio, J. J. and Deserno, M. (2012). Determining the Gaussian curvature modulus of lipid membranes in simulations, Biophys. J. 102(6): 1403 1410.
  181. Itzykson, C. (1986). Random geometry, lattices and fields, in J. Abad , M. Asorey and A. Cruz (Eds.), Proceedings of the GIFT Seminar, Jaca 85, World Scientific, Singapore, pp. 130 188.
  182. Kusumaatmaja, H. , Li, Y. , Dimova, R. and Lipowsky, R. (2009). Intrinsic contact angle of aqueous phases at membranes and vesicles, Phys. Rev. Lett. 103(23): 238103.
  183. Lanotte, L. , Mauer, J. , Mendez, S. , Fedosov, D. A. , Fromental, J.-M. , Claveria, V. , Nicoud, F. , Gompper, G. and Abkarian, M. (2016). Red cells dynamic morphologies govern blood shear thinning under microcirculatory flow conditions, Proc. Natl. Acad. Sci. USA 113: 13289 13294.
  184. Lekkerkerker, H. (1990). The electric contribution to the curvature elastic moduli of charged fluid interfaces, Physica A 167(2): 384 394.
  185. Lim, G. , Wortis, M. and Mukhopadhyay, R. (2002). Stomatocyte-discocyte-echinocyte sequence of the human red blood cell: Evidence for the bilayer-couple hypothesis from membrane mechanics, Proc. Natl. Acad. Sci. USA 99: 16766 16769.
  186. Lowengrub, J. S. , R tz, A. and Voigt, A. (2009). Phase-field modeling of the dynamics of multicomponent vesicles: Spinodal decomposition, coarsening, budding, and fission, Phys. Rev. E 79(3): 031926.
  187. Marrink, S. J. , de Vries, A. H. and Mark, A. E. (2004). Coarse grained model for semiquantitative lipid simulations, J. Phys. Chem. B 108(2): 750 760.
  188. McWhirter, J. L. , Noguchi, H. and Gompper, G. (2009). Flow-induced clustering and alignment of vesicles and red blood cells in microcapillaries, Proc. Natl. Acad. Sci. USA 106: 6039 6043.
  189. Milner, S. and Witten, T. (1988). Bending moduli of polymeric surfactant interfaces, J. Phys. (France) 49(11): 1951 1962.
  190. Nelson, D. , Piran, T. and Weinberg, S. (Eds) (2004). Statistical Mechanics of Membranes and Surfaces, 2nd ed, World Scientific, Singapore.
  191. Noguchi, H. (2015). Shape transitions of high-genus fluid vesicles, EPL (Europhys. Lett.) 112(5): 58004.
  192. Noguchi, H. and Gompper, G. (2005b). Shape transitions of fluid vesicles and red blood cells in capillary flows, Proc. Natl. Acad. Sci. USA 102: 14159 14164.
  193. Noguchi, H. , Sakashita, A. and Imai, M. (2015). Shape transformations of toroidal vesicles, Soft Matter 11(1): 193 201.
  194. Park, Y.-K. , Best, C. A. , Auth, T. , Gov, N. S. , Safran, S. A. , Popescu, G. , Suresh, S. and Feld, M. S. (2010). Metabolic remodeling of the human red blood cell membrane, Proc. Natl. Acad. Sci. USA 107: 1289 1294.
  195. Reynwar, B. J. , Illya, G. , Harmandaris, V. A. , M ller, M. M. , Kremer, K. and Deserno, M. (2007). Aggregation and vesiculation of membrane proteins by curvature-mediated interactions, Nature 447(7143): 461 464.
  196. Safran, S. A. (1994). Statistical Thermodynamics of Surfaces, Interfaces, and Membranes, Addison-Wesley, Reading, MA.
  197. Sch fer, L. V. , de Jong, D. H. , Holt, A. , Rzepiela, A. J. , de Vries, A. H. , Poolman, B. , Killian, J. A. and Marrink, S. J. (2011). Lipid packing drives the segregation of transmembrane helices into disordered lipid domains in model membranes, Proc. Natl. Acad. Sci. U.S.A. 108(4): 1343 1348.
  198. Seifert, U. (1997a). Configurations of fluid membranes and vesicles, Adv. Phys. 46(1): 13 137.
  199. Shiba, H. and Noguchi, H. (2011). Estimation of the bending rigidity and spontaneous curvature of fluid membranes in simulations, Phys. Rev. E 84(3): 031926.
  200. Smith, A.-S. , Sackmann, E. and Seifert, U. (2003). Effects of a pulling force on the shape of a bound vesicle, EPL (Europhys. Lett.) 64(2): 281.

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Authors
Parra‐Ortiz, E., & Needham, D.
Affiliations
Centre National de la Recherche Scientifique (FR)
ORCID
Venue
CRC Press eBooks
Publisher
CRC Press
Published
2019-11-19
DOI
10.1201/9781315152516
OpenAlex
W2950906503
Cited by
178
References
0
Citations by year
2026: 21 · 2025: 24 · 2024: 27 · 2023: 18 · 2022: 28 · 2021: 32 · 2020: 21 · 2019: 4 · 2018: 3
Type
reference entry
Language
en
Open access
Locations
  • CRC Press eBooks (publishedVersion)
  • Research at the University of Copenhagen (University of Copenhagen) (submittedVersion)
  • MPG.PuRe (Max Planck Society) (submittedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Caveolin-1 and cellular processes
Keywords
giant unilamellar vesicles, synthetic lipid membranes, micropipette aspiration, membrane mechanics

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