Zebrafish mutations in gart and paics identify crucial roles for de novo purine synthesis in vertebrate pigmentation and ocular development
Open accessAbstract
Although purines and purinergic signaling are crucial for numerous biochemical and cellular processes, their functions during vertebrate embryonic development have not been well characterized. We analyze two recessive zebrafish mutations that affect de novo purine synthesis, gart and paics. gart encodes phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase,phosphoribosylaminoimidazole synthetase, a trifunctional enzyme that catalyzes steps 2, 3 and 5 of inosine monophosphate (IMP) synthesis. paicsencodes phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase, a bifunctional enzyme that catalyzes steps 6 and 7 of this process. Zygotic gart and paics mutants have pigmentation defects in which xanthophore and iridophore pigmentation is almost completely absent, and melanin-derived pigmentation is significantly decreased, even though pigment cells are present in normal amounts and distributions. Zygotic gart and paics mutants are also microphthalmic, resulting from defects in cell cycle exit of proliferative retinoblasts within the developing eye. Maternal-zygotic and maternal-effect mutants demonstrate a crucial requirement for maternally derived gartand paics; these mutants show more severe developmental defects than their zygotic counterparts. Pigmentation and eye growth phenotypes in zygotic gart and paics mutants can be ascribed to separable biosynthetic pathways: pigmentation defects and microphthalmia result from deficiencies in a GTP synthesis pathway and an ATP synthesis pathway,respectively. In the absence of ATP pathway activity, S phase of proliferative retinoblasts is prolonged and cell cycle exit is compromised, which results in microphthalmia. These results demonstrate crucial maternal and zygotic requirements for de novo purine synthesis during vertebrate embryonic development, and identify independent functions for ATP and GTP pathways in mediating eye growth and pigmentation, respectively.
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Many genes previously known to be expressed by iridophores are components of the purine synthesis pathway.
“Many of the genes previously known to be expressed by iridophores are components of the purine synthesis pathway, as iridophore pigment largely consists of stacks of guanine plates [30], [71].”
From Gene Expression Analysis of Zebrafish Melanocytes, Iridophores, and Retinal Pigmented Epithelium Reveals Indicators of Biological Function and Developmental Origin (2013) · cites this paper as [30]
The Introduction identifies gart and paics as purine-synthesis genes and describes guanine stacks in iridophores. The Results say these genes are highly expressed in pigment cells, but do not establish that many previously known iridophore-expressed genes belong to the pathway. (LLM, conf=0.82)
Experimental — accuracy not yet measuredZebrafish bearing mutations in the de novo purine synthesis enzymes gart and paics have iridophore defects.
“Zebrafish bearing mutations in the de novo purine synthesis enzymes gart and paics have iridophore defects, indicating purine synthesis is important for iridophore pigmentation [30].”
Purine synthesis is important for iridophore pigmentation.
“Zebrafish bearing mutations in the de novo purine synthesis enzymes gart and paics have iridophore defects, indicating purine synthesis is important for iridophore pigmentation [30].”
Iridophore pigment largely consists of stacks of guanine plates.
“Many of the genes previously known to be expressed by iridophores are components of the purine synthesis pathway, as iridophore pigment largely consists of stacks of guanine plates [30], [71].”
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- Authors
- Ng, A., Uribe, R. A., Yieh, L., Nuckels, R., & Gross, J. M.
- Affiliations
- The University of Texas at Austin (US)
- Venue
- Development
- Publisher
- The Company of Biologists
- Published
- 2009-08-01
- Volume
- 136
- Issue
- 15
- Pages
- 2601-2611
- ISSN
- 0950-1991 (ISSN-L)
- 1477-9129
- PMC
- PMC2709066
- OpenAlex
- W1972806235
- Cited by
- 87
- References
- 0
- Citations by year
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- FWCI
- 1.12
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Development (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Eye Institute (R01EY018005, F31EY019239)
- National Center for Research Resources (P40RR012546)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Molecular Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › melanin and skin pigmentation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Zebrafish Biomedical Research Applications
- Keywords
- de novo purine synthesis, GART, PAICS, pigmentation, melanin, microphthalmia, cell cycle exit, ATP production, purinergic signaling, embryonic development
- MeSH terms
- Adenosine Triphosphate, Animals, Carboxy-Lyases, Embryo, Nonmammalian, Eye, Female, Guanosine Triphosphate, Inosine Monophosphate, Microphthalmos, Models, Biological, Mutation, Peptide Synthases, Phenotype, Pigmentation, Pigments, Biological, Purines, Retina, Zebrafish, S Phase, Apoptosis, Gene Expression Regulation, Developmental, Zebrafish Proteins, Embryonic Development, Cell Proliferation, Phosphoribosylglycinamide Formyltransferase
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