Cited by 6Protein Kinase Regulation and GTPase SignalingCellular Mechanics and InteractionsCell Adhesion Molecules Research

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

The dual Ras-association domains of Drosophila Canoe have differential roles in linking cell junctions to the cytoskeleton during morphogenesis

Open access

Published version of a preprint

Abstract

During development cells must change shape and move without disrupting dynamic tissue architecture. This requires robust linkage of cell–cell adherens junctions to the force-generating actomyosin cytoskeleton. Drosophila Canoe and mammalian afadin play key roles in the regulation of such linkages. One central task for the field is defining mechanisms by which upstream inputs from Ras-family GTPases regulate Canoe and afadin. These proteins are unusual in sharing two tandem Ras-association (RA) domains – RA1 and RA2 – which when deleted virtually eliminate Canoe function. Work in vitro has suggested that RA1 and RA2 differ in GTPase affinity, but their individual functions in vivo remain unknown. Combining bioinformatic and biochemical approaches, we find that both RA1 and RA2 bind to active Rap1 with similar affinities, and that their conserved N-terminal extensions enhance binding. We created Drosophila canoe mutants to test RA1 and RA2 function in vivo. Despite their similar affinities for Rap1, RA1 and RA2 play strikingly different roles. Deleting RA1 virtually eliminates Canoe function, whereas mutants lacking RA2 are viable and fertile but have defects in junctional reinforcement in embryos and during pupal eye development. These data significantly expand our understanding of the regulation of adherens junction–cytoskeletal linkages.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1242/jcs.263546

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 52

  1. Birukova, 2013, Rap-afadin axis in control of Rho signaling and endothelial barrier recovery, Mol. Biol. Cell, 24, 2678, 10.1091/mbc.e13-02-0098 · DOI
  2. Blackie, 2021, A combination of Notch signaling, preferential adhesion and endocytosis induces a slow mode of cell intercalation in the Drosophila retina, Development, 148, dev197301, 10.1242/dev.197301 · DOI
  3. Boettner, 2009, Control of cell adhesion dynamics by Rap1 signaling, Curr. Opin. Cell Biol., 21, 684, 10.1016/j.ceb.2009.06.004 · DOI
  4. Boettner, 2000, The junctional multidomain protein AF-6 is a binding partner of the Rap1A GTPase and associates with the actin cytoskeletal regulator profilin, Proc. Natl. Acad. Sci. USA, 97, 9064, 10.1073/pnas.97.16.9064 · DOI
  5. Boettner, 2003, The AF-6 homolog canoe acts as a Rap1 effector during dorsal closure of the Drosophila embryo, Genetics, 165, 159, 10.1093/genetics/165.1.159 · DOI
  6. Bonello, 2018, Rap1 acts via multiple mechanisms to position Canoe and adherens junctions and mediate apical-basal polarity establishment, Development, 145, dev157941, 10.1242/dev.157941 · DOI
  7. Bunney, 2006, Structural and mechanistic insights into ras association domains of phospholipase C epsilon, Mol. Cell, 21, 495, 10.1016/j.molcel.2006.01.008 · DOI
  8. Cherfils, 2013, Regulation of small GTPases by GEFs, GAPs, and GDIs, Physiol. Rev., 93, 269, 10.1152/physrev.00003.2012 · DOI · Paper page
  9. Choi, 2011, The single Drosophila ZO-1 protein Polychaetoid regulates embryonic morphogenesis in coordination with Canoe/Afadin and Enabled, Mol. Biol. Cell, 22, 2010, 10.1091/mbc.e10-12-1014 · DOI
  10. Choi, 2013, Rap1 and Canoe/afadin are essential for establishment of apical-basal polarity in the Drosophila embryo, Mol. Biol. Cell, 24, 945, 10.1091/mbc.e12-10-0736 · DOI
  11. Choi, 2016, Remodeling the zonula adherens in response to tension and the role of afadin in this response, J. Cell Biol., 213, 243, 10.1083/jcb.201506115 · DOI
  12. Chou, 1996, The autosomal FLP-DFS technique for generating germline mosaics in Drosophila melanogaster, Genetics, 144, 1673, 10.1093/genetics/144.4.1673 · DOI
  13. DeAngelis, 2019, Dissection of the Drosophila pupal retina for immunohistochemistry, western analysis, and RNA isolation, J. Vis. Exp., 145, 10.3791/59299 · DOI
  14. Dusaban, 2015, PLCepsilon mediated sustained signaling pathways, Adv. Biol. Regul., 57, 17, 10.1016/j.jbior.2014.09.014 · DOI
  15. Gaengel, 2003, Egfr signaling regulates ommatidial rotation and cell motility in the Drosophila eye via MAPK/Pnt signaling and the Ras effector Canoe/AF6, Development, 130, 5413, 10.1242/dev.00759 · DOI
  16. Grillo-Hill, 2009, Dynamic cell shapes and contacts in the developing Drosophila retina are regulated by the Ig cell adhesion protein hibris, Dev. Dyn., 238, 2223, 10.1002/dvdy.21981 · DOI
  17. Gurley, 2023, Exploring the evolution and function of Canoe's intrinsically disordered region in linking cell-cell junctions to the cytoskeleton during embryonic morphogenesis, PLoS ONE, 18, e0289224, 10.1371/journal.pone.0289224 · DOI · Paper page
  18. Harris, 2004, Adherens junction-dependent and -independent steps in the establishment of epithelial cell polarity in Drosophila, J. Cell Biol., 167, 135, 10.1083/jcb.200406024 · DOI
  19. Hiremath, 2023, Rap1 regulates lumen continuity via Afadin in renal epithelia, Dev. Biol., 501, 20, 10.1016/j.ydbio.2023.05.003 · DOI
  20. Hunter, 2000, Regulated expression of nullo is required for the formation of distinct apical and basal adherens junctions in the Drosophila blastoderm, J. Cell Biol., 150, 391, 10.1083/jcb.150.2.391 · DOI
  21. Iwasawa, 2012, R-Ras controls axon branching through afadin in cortical neurons, Mol. Biol. Cell, 23, 2793, 10.1091/mbc.e12-02-0103 · DOI
  22. Johnson, 2021, Hexagonal patterning of the Drosophila eye, Dev. Biol., 478, 173, 10.1016/j.ydbio.2021.07.004 · DOI
  23. Johnson, 2009, A quantitative method to analyze Drosophila pupal eye patterning, PLoS ONE, 4, e7008, 10.1371/journal.pone.0007008 · DOI
  24. Jürgens, 1984, Mutations affecting the pattern of the larval cuticle in Drosophila melanogaster: II. Zygotic loci on the third chromosome, Roux's Arch. Dev. Biol., 193, 283, 10.1007/BF00848157 · DOI
  25. Kelley, 2001, Phospholipase C(epsilon): a novel Ras effector, EMBO J., 20, 743, 10.1093/emboj/20.4.743 · DOI
  26. Kuriyama, 1996, Identification of AF-6 and canoe as putative targets for Ras, J. Biol. Chem., 271, 607, 10.1074/jbc.271.2.607 · DOI
  27. Linnemann, 1999, Thermodynamic and kinetic characterization of the interaction between the Ras binding domain of AF6 and members of the Ras subfamily, J. Biol. Chem., 274, 13556, 10.1074/jbc.274.19.13556 · DOI
  28. Manning, 2019, The Drosophila Afadin and ZO-1 homologues Canoe and Polychaetoid act in parallel to maintain epithelial integrity when challenged by adherens junction remodeling, Mol. Biol. Cell, 30, 1938, 10.1091/mbc.E19-04-0209 · DOI
  29. Matsuo, 1997, Regulation of cone cell formation by Canoe and Ras in the developing Drosophila eye, Development, 124, 2671, 10.1242/dev.124.14.2671 · DOI
  30. Matsuo, 1999, The Canoe protein is necessary in adherens junctions for development of ommatidial architecture in the Drosophila compound eye, Cell Tissue Res., 298, 397, 10.1007/s004419900107 · DOI
  31. McParland, 2024, The Dilute domain in Canoe is not essential for linking cell junctions to the cytoskeleton but supports morphogenesis robustness, J. Cell Sci., 137, jcs261734, 10.1242/jcs.261734 · DOI
  32. Mirdita, 2022, ColabFold: making protein folding accessible to all, Nat. Methods, 19, 679, 10.1038/s41592-022-01488-1 · DOI · Paper page
  33. Mott, 2015, Structures of Ras superfamily effector complexes: what have we learnt in two decades?, Crit. Rev. Biochem. Mol. Biol., 50, 85, 10.3109/10409238.2014.999191 · DOI
  34. Pannekoek, 2020, Multiple Rap1 effectors control Epac1-mediated tightening of endothelial junctions, Small GTPases, 11, 346, 10.1080/21541248.2018.1431512 · DOI
  35. Perez-Vale, 2020, Orchestrating morphogenesis: building the body plan by cell shape changes and movements, Development, 147, dev191049, 10.1242/dev.191049 · DOI
  36. Perez-Vale, 2021, Multivalent interactions make adherens junction-cytoskeletal linkage robust during morphogenesis, J. Cell Biol., 220, e202104087, 10.1083/jcb.202104087 · DOI
  37. Perez-Vale, 2023, Rap1 regulates apical contractility to allow embryonic morphogenesis without tissue disruption and acts in part via Canoe-independent mechanisms, Mol. Biol. Cell, 34, ar7, 10.1091/mbc.E22-05-0176 · DOI
  38. Quilliam, 1999, M-Ras/R-Ras3, a transforming ras protein regulated by Sos1, GRF1, and p120 Ras GTPase-activating protein, interacts with the putative Ras effector AF6, J. Biol. Chem., 274, 23850, 10.1074/jbc.274.34.23850 · DOI · Paper page
  39. Rugema, 2020, Structure of phospholipase Cepsilon reveals an integrated RA1 domain and previously unidentified regulatory elements, Commun. Biol., 3, 445, 10.1038/s42003-020-01178-8 · DOI
  40. Sawyer, 2009, The Drosophila afadin homologue Canoe regulates linkage of the actin cytoskeleton to adherens junctions during apical constriction, J. Cell Biol., 186, 57, 10.1083/jcb.200904001 · DOI
  41. Sawyer, 2011, A contractile actomyosin network linked to adherens junctions by Canoe/afadin helps drive convergent extension, Mol. Biol. Cell, 22, 2491, 10.1091/mbc.e11-05-0411 · DOI
  42. Shao, 1999, Biochemical characterization of the Ras-related GTPases Rit and Rin, Arch. Biochem. Biophys., 371, 207, 10.1006/abbi.1999.1448 · DOI
  43. Smith, 2023, Defining bone fide effectors of RAS GTPases, BioEssays, 45, e2300088, 10.1002/bies.202300088 · DOI
  44. Smith, 2017, Evolution of AF6-RAS association and its implications in mixed-lineage leukemia, Nat. Commun., 8, 1099, 10.1038/s41467-017-01326-5 · DOI
  45. Song, 2002, Differential roles of Ras and Rap1 in growth factor-dependent activation of phospholipase C epsilon, Oncogene, 21, 8105, 10.1038/sj.onc.1206003 · DOI
  46. Spahn, 2012, The PDZ-GEF Dizzy regulates the establishment of adherens junctions required for ventral furrow formation in Drosophila, J. Cell Sci., 125, 3801, 10.1242/jcs.101196 · DOI
  47. Tawa, 2010, Role of afadin in vascular endothelial growth factor- and sphingosine 1-phosphate-induced angiogenesis, Circ. Res., 106, 1731, 10.1161/CIRCRESAHA.110.216747 · DOI
  48. Van Aelst, 1994, Ras partners, Cold Spring Harb. Symp. Quant. Biol., 59, 181, 10.1101/SQB.1994.059.01.022 · DOI
  49. Varadi, 2022, AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models, Nucleic Acids Res., 50, D439, 10.1093/nar/gkab1061 · DOI · Paper page
  50. Walther, 2018, Rap1, Canoe and Mbt cooperate with Bazooka to promote zonula adherens assembly in the fly photoreceptor, J. Cell Sci., 131, jcs207779, 10.1242/jcs.207779 · DOI
  51. Wieschaus, 1986, Looking at embryos, 199
  52. Wohlgemuth, 2005, Recognizing and defining true Ras binding domains I: biochemical analysis, J. Mol. Biol., 348, 741, 10.1016/j.jmb.2005.02.048 · DOI

Metadata

Authors
McParland, E. D., Gurley, N. J., Wolfsberg, L. R., Butcher, T. A., Bhattarai, A., Jensen, C. C., Johnson, R. I., Slep, K. C., & Peifer, M.
Affiliations
  • University of North Carolina at Chapel Hill (US)
  • Wesleyan University (US)
Corresponding author
  • Slep, Kevin C.
  • Peifer, Mark
Venue
Journal of Cell Science
Published
2024-12-01
Volume
137
Issue
23
ISSN
  • 0021-9533 (ISSN-L)
  • 1477-9137
OpenAlex
W4403768074
Cited by
6
References
1
Citations by year
2026: 2 · 2025: 3 · 2024: 1
FWCI
0.81
Type
journal article
Language
en
Open access
Locations
  • Journal of Cell Science (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • PubMed Central (publishedVersion, cc-by)
Funders
  • National Institutes of Health (R35 GM118096, R15 GM114729)
  • University of North Carolina at Chapel Hill
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
  • Health Sciences › Medicine › Immunology and Allergy › Cell Adhesion Molecules Research
Keywords
canoes, afadin, Ras association domain, Rap1, adherens junctions, actomyosin cytoskeleton, cell shape changes, cell migration, Drosophila embryo
MeSH terms
Protein Domains, Animals, Cytoskeleton, Drosophila melanogaster, Intercellular Junctions, Morphogenesis, Protein Binding, ras Proteins, Adherens Junctions, Drosophila Proteins

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review