Linkage of Osteoporosis to Chromosome 20p12 and Association to BMP2
Open accessAbstract
Osteoporotic fractures are a major cause of morbidity and mortality in ageing populations. Osteoporosis, defined as low bone mineral density (BMD) and associated fractures, have significant genetic components that are largely unknown. Linkage analysis in a large number of extended osteoporosis families in Iceland, using a phenotype that combines osteoporotic fractures and BMD measurements, showed linkage to Chromosome 20p12.3 (multipoint allele-sharing LOD, 5.10; p value, 6.3 x 10(-7)), results that are statistically significant after adjusting for the number of phenotypes tested and the genome-wide search. A follow-up association analysis using closely spaced polymorphic markers was performed. Three variants in the bone morphogenetic protein 2 (BMP2) gene, a missense polymorphism and two anonymous single nucleotide polymorphism haplotypes, were determined to be associated with osteoporosis in the Icelandic patients. The association is seen with many definitions of an osteoporotic phenotype, including osteoporotic fractures as well as low BMD, both before and after menopause. A replication study with a Danish cohort of postmenopausal women was conducted to confirm the contribution of the three identified variants. In conclusion, we find that a region on the short arm of Chromosome 20 contains a gene or genes that appear to be a major risk factor for osteoporosis and osteoporotic fractures, and our evidence supports the view that BMP2 is at least one of these genes.
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The largest study, in Icelandic and Danish cohorts, links BMP2 polymorphisms to low BMD and fracture risk.
“the largest study to date, in Icelandic and Danish cohorts, suggests that polymorphisms of the BMP2 gene are linked to low BMD and fracture risk”
From Pathogenesis of osteoporosis: concepts, conflicts, and prospects (2005) · cites this paper as [79]
The Abstract and Results (Haplotype Confirmation in Danish Cohort; page numbers unavailable) report BMP2-variant associations with low BMD and osteoporotic fractures in Icelandic patients, with supporting results in a Danish cohort. The copy describes a large Icelandic study but does not establish that it was the largest study to date. (LLM, conf=0.82)
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Risch, N., & Teng, J. (1998) · Genome Research · doi:10.1101/gr.8.12.1273 · Cited by 366 · see citing works
Flagged first, then by citations
Research works printed but not linked: 51
- Boyden LM Mao J Belsky J Mitzner L Farhi A High bone density due to a mutation in LDL-receptor-related protein 5 N Engl J Med 2002 346 1513 1521 12015390
- Carn G Koller DL Peacock M Hui SL Evans WE Sibling pair linkage and association studies between peak bone mineral density and the gene locus for the osteoclast-specific subunit (OC116) of the vacuolar proton pump on chromosome 11p12–13 J Clin Endocrinol Metab 2002 87 3819 3824 12161516
- Chen X Levine L Kwok PY Fluorescence polarization in homogeneous nucleic acid analysis Genome Res 1999 9 492 498 10330129 PMC310763
- Deng HW Xu FH Huang QY Shen H Deng H A whole-genome linkage scan suggests several genomic regions potentially containing quantitative trait loci for osteoporosis J Clin Endocrinol Metab 2002 87 5151 5159 12414886
- Devoto M Shimoya K Caminis J Ott J Tenenhouse A First-stage autosomal genome screen in extended pedigrees suggests genes predisposing to low bone mineral density on chromosomes 1p, 2p and 4q Eur J Hum Genet 1998 6 151 157 9781060
- Duncan EL Brown MA Sinsheimer J Bell J Carr AJ Suggestive linkage of the parathyroid receptor type 1 to osteoporosis J Bone Miner Res 1999 14 1993 1999 10620056
- Efstathiadou Z Tsatsoulis A Ioannidis JP Association of collagen Iα1 Sp1 polymorphism with the risk of prevalent fractures: A meta-analysis J Bone Miner Res 2001 16 1586 1592 11547828
- Frattini A Orchard PJ Sobacchi C Giliani S Abinun M Defects in TCIRG1 subunit of the vacuolar proton pump are responsible for a subset of human autosomal recessive osteopetrosis Nat Genet 2000 25 343 346 10888887
- Fujii M Takeda K Imamura T Aoki H Sampath TK Roles of bone morphogenetic protein type I receptors and Smad proteins in osteoblast and chondroblast differentiation Mol Biol Cell 1999 10 3801 3813 10564272 PMC25680
- Gong Y Slee RB Fukai N Rawadi G Roman-Roman S LDL receptor-related protein 5 (LRP5) affects bone accrual and eye development Cell 2001 107 513 523 11719191
- Goring HH Terwilliger JD Blangero J Large upward bias in estimation of locus-specific effects from genomewide scans Am J Hum Genet 2001 69 1357 1369 11593451 PMC1235546
- Gretarsdottir S Sveinbjornsdottir S Jonsson HH Jakobsson F Einarsdottir E Localization of a susceptibility gene for common forms of stroke to 5q12 Am J Hum Genet 2002 70 593 603 11833004 PMC384939
- Gretarsdottir S Thorleifsson G Reynisdottir ST Manolescu A Jonsdottir S The gene encoding phosphodiesterase 4D confers risk of ischemic stroke Nat Genet 2003 35 131 138 14517540
- Gudbjartsson DF Jonasson K Frigge ML Kong A Allegro, a new computer program for multipoint linkage analysis Nat Genet 2000 25 12 13 10802644
- Gulcher JR Stefansson K The Icelandic Healthcare Database and informed consent N Engl J Med 2000 342 1827 1830 10853008
- Gulcher JR Kristjansson K Gudbjartsson H Stefansson K Protection of privacy by third-party encryption in genetic research in Iceland Eur J Hum Genet 2000 8 739 742 11039572
- Gulcher JR Kong A Stefansson K The genealogic approach to human genetics of disease Cancer J 2001a 7 61 68 11269649
- Gulcher JR Kong A Stefansson K The role of linkage studies for common diseases Curr Opin Genet Dev 2001b 11 264 267 11377961
- Hedrick PW Gametic disequilibrium measures: Proceed with caution Genetics 1987 117 331 341 3666445 PMC1203208
- Hodge SE The information contained in multiple sibling pairs Genet Epidemiol 1984 1 109 122 6599401
- Kanzler B Foreman RK Labosky PA Mallo M BMP signaling is essential for development of skeletogenic and neurogenic cranial neural crest Development 2000 127 1095 1104 10662648
- Karasik D Myers RH Hannan MT Gagnon D McLean RR Mapping of quantitative ultrasound of the calcaneus bone to chromosome 1 by genome-wide linkage analysis Osteoporos Int 2002 13 796 802 12378368
- Katagiri T Yamaguchi A Komaki M Abe E Takahashi N Bone morphogenetic protein-2 converts the differentiation pathway of C2C12 myoblasts into the osteoblast lineage J Cell Biol 1994 127 1755 1766 7798324 PMC2120318
- Koller DL Rodriguez LA Christian JC Slemenda CW Econs MJ Linkage of a QTL contributing to normal variation in bone mineral density to chromosome 11q12–13 J Bone Miner Res 1998 13 1903 1908 9844108
- Koller DL Econs MJ Morin PA Christian JC Hui SL Genome screen for QTLs contributing to normal variation in bone mineral density and osteoporosis J Clin Endocrinol Metab 2000 85 3116 3120 10999795
- Koller DL Liu G Econs MJ Hui SL Morin PA Genome screen for quantitative trait loci underlying normal variation in femoral structure J Bone Miner Res 2001 16 985 991 11393795
- Kong A Cox NJ Allele-sharing models: Lod scores and accurate linkage tests Am J Hum Genet 1997 61 1179 1188 9345087 PMC1716027
- Kong A Gudbjartsson DF Sainz J Jonsdottir GM Gudjonsson SA A high-resolution recombination map of the human genome Nat Genet 2002 31 241 247 12053178
- Kornak U Schulz A Friedrich W Uhlhaas S Kremens B Mutations in the α3 subunit of the vacuolar H(+)-ATPase cause infantile malignant osteopetrosis Hum Mol Genet 2000 9 2059 2063 10942435
- Kruglyak L Daly MJ Reeve-Daly MP Lander ES Parametric and nonparametric linkage analysis: A unified multipoint approach Am J Hum Genet 1996 58 1347 1363 8651312 PMC1915045
- Lander E Kruglyak L Genetic dissection of complex traits: Guidelines for interpreting and reporting linkage results Nat Genet 1995 11 241 247 7581446
- Lewontin RC The interaction of selection and linkage. I. General considerations: Heterotic models Genetics 1964 49 49 46 17248194 PMC1210557
- Little RD Carulli JP Del Mastro RG Dupuis J Osborne M A mutation in the LDL receptor-related protein 5 gene results in the autosomal dominant high-bone-mass trait Am J Hum Genet 2002 70 11 19 11741193 PMC419982
- Mann V Hobson EE Li B Stewart TL Grant SF A COL1A1 Sp1 binding site polymorphism predisposes to osteoporotic fracture by affecting bone density and quality J Clin Invest 2001 107 899 907 11285309 PMC199568
- Marshall D Johnell O Wedel H Meta-analysis of how well measures of bone mineral density predict occurrence of osteoporotic fractures BMJ 1996 312 1254 1259 8634613 PMC2351094
- Mundy GR Chen D Zhao M Dallas S Xu C Growth regulatory factors and bone Rev Endocr Metab Disord 2001 2 105 115 11704973
- Nicolae DL Allele sharing models in genne mapping: A likelihood approach [dissertation] 1999 Chicago, Illinois Department of Statistics, University of Chicago 126
- Niu T Chen C Cordell H Yang J Wang B A genome-wide scan for loci linked to forearm bone mineral density Hum Genet 1999 104 226 233 10323246
- Peacock M Turner CH Econs MJ Foroud T Genetics of osteoporosis Endocr Rev 2002 23 303 326 12050122
- Ray NF Chan JK Thamer M Melton LJ Medical expenditures for the treatment of osteoporotic fractures in the United States in 1995: Report from the National Osteoporosis Foundation J Bone Miner Res 1997 12 24 35 9240722
- Reid IR Relationships among body mass, its components, and bone Bone 2002 31 547 555 12477567
- Spotila LD Caminis J Devoto M Shimoya K Sereda L Osteopenia in 37 members of seven families: Analysis based on a model of dominant inheritance Mol Med 1996 2 313 324 8784784 PMC2230150
- Stefansson H Sigurdsson E Steinthorsdottir V Bjornsdottir S Sigmundsson T Neuregulin 1 and susceptibility to schizophrenia Am J Hum Genet 2002 71 877 892 12145742 PMC378543
- Takazawa Y Tsuji K Nifuji A Kurosawa H Ito Y An osteogenesis-related transcription factor, core-binding factor A1, is constitutively expressed in the chondrocytic cell line TC6, and its expression is upregulated by bone morphogenetic protein-2 J Endocrinol 2000 165 579 586 10828841
- van Hul E Gram J Bollerslev J van Wesenbeeck L Mathysen D Localization of the gene causing autosomal dominant osteopetrosis type I to chromosome 11q12–13 J Bone Miner Res 2002 17 1111 1117 12054167
- Weeks DE Lange K The affected-pedigree-member method of linkage analysis Am J Hum Genet 1988 42 315 326 3422543 PMC1715269
- Whittemore AS Halpern J A class of tests for linkage using affected pedigree members Biometrics 1994 50 118 127 8086596
- Wilson SG Reed PW Bansal A Chiano M Lindersson M Comparison of genome screens for two independent cohorts provides replication of suggestive linkage of bone mineral density to 3p21 and 1p36 Am J Hum Genet 2003 72 144 155 12478480 PMC378619
- Wozney JM Rosen V Celeste AJ Mitsock LM Whitters MJ Novel regulators of bone formation: Molecular clones and activities Science 1988 242 1528 1534 3201241
- Wozney JM Rosen V Byrne M Celeste AJ Moutsatsos I Growth factors influencing bone development J Cell Sci 1990 13 Suppl 149 156 2084114
- Zhang H Bradley A Mice deficient for BMP2 are nonviable and have defects in amnion/chorion and cardiac development Development 1996 122 2977 2986 8898212
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- Authors
- Styrkarsdottir, U., Cazier, J.-B., Kong, A., Rolfsson, O., Larsen, H., Bjarnadottir, E., Johannsdottir, V. D., Sigurdardottir, M. S., Bagger, Y., Christiansen, C., Reynisdottir, I., Grant, S. F. A., Jonasson, K., Frigge, M. L., Gulcher, J. R., Sigurdsson, G., & Stefansson, K.
- Affiliations
- deCODE Genetics (Iceland) (IS)
- Center for Clinical & Basic Research (DK)
- National University Hospital of Iceland (IS)
- Corresponding author
- Sigurdsson, Gunnar
- ORCID
- Venue
- PLoS Biology
- Publisher
- Public Library of Science (PLoS)
- Published
- 2003-11-03
- Volume
- 1
- Issue
- 3
- Pages
- e69
- ISSN
- 1544-9173 (ISSN-L)
- 1545-7885
- PMC
- PMC270020
- OpenAlex
- W2085266575
- Cited by
- 248
- References
- 1
- Citations by year
- 2024: 2 · 2023: 2 · 2022: 2 · 2021: 9 · 2019: 7 · 2018: 6 · 2017: 9 · 2016: 7 · 2015: 8 · 2014: 8 · 2013: 12 · 2012: 12
- FWCI
- 22.84
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- PLoS Biology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, other-oa)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- University of Birmingham Research Portal (University of Birmingham) (submittedVersion, other-oa)
- Hirsla (Landspítali University Hospital) (submittedVersion)
- Topics
- Health Sciences › Medicine › Orthopedics and Sports Medicine › Bone health and osteoporosis research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bone Metabolism and Diseases
- Keywords
- osteoporosis, osteoporotic fractures, BMP-2, genetic linkage, genetic association, osteopenia, postmenopausal women, Icelandic families, single nucleotide polymorphisms, missense polymorphisms
- MeSH terms
- Alleles, Chromosome Mapping, Chromosomes, Human, Pair 20, Genotype, Haplotypes, Humans, Iceland, Genetic Linkage, Lod Score, Molecular Sequence Data, Osteoporosis, Phenotype, Polymorphism, Genetic, Risk Factors, Genetic Variation, Cohort Studies, Bone Density, Linkage Disequilibrium, Transforming Growth Factor beta, Bone Morphogenetic Proteins, Mutation, Missense, Polymorphism, Single Nucleotide, Bone Morphogenetic Protein 2
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