Application of ribonucleoside vanadyl complex (RVC) for developing a multifunctional tissue preservative solution
Open accessAbstract
The quality of biological samples greatly affects the accuracy of scientific results. However, RNA in cryopreserved tissues gradually degrades during storage, leading to errors in the results of subsequent experiments. A suitable sample preservative solution can prolong storage and enhance the research value of samples. Here, we developed a sample preservative solution using the properties of the ribonucleoside vanadyl complex (RVC) and compared its effects on RNA and DNA quality, protein activity, and tissue morphology with the commercially available and widely used RNAlater® Stabilization Solution. The results showed that both the RVC-based preservative solution and RNAlater can effectively delay RNA degradation in tissue samples stored at 4°C or -80°C compared with samples stored without any preservative solution. In contrast to RNAlater, the RVC-based preservative solution did not result in damage to the tissue morphology or a loss of protein activity. Additionally, the RVC-based preservative solution did not affect the RNA and genomic DNA contents of the tissue samples or the results of subsequent experimental analyses. An RVC-based reagent can be used as a multifunctional yet relatively inexpensive tissue preservative solution to provide a comprehensive and cost-effective method for preserving samples for tissue banks.
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The nucleus isolation protocol effectively maintains nucleus structure without shrinkage.
“Consistent with the preservative function of VRC proven in maintaining tissue morphology (Shieh et al., 2018), these findings show that our nucleus isolation protocol effectively maintains nucleus structure without shrinkage.”
From Robust single-nucleus RNA sequencing reveals depot-specific cell population dynamics in adipose tissue remodeling during obesity (2025) · cites this paper as Shieh et al., 2018
This observation aligns with a recent study that demonstrated the preservative properties of VRC, protecting tissue morphology, as well as RNA, protein, and genomic DNA quality.
“This observation aligns with a recent study that demonstrated the preservative properties of VRC, protecting tissue morphology, as well as RNA, protein, and genomic DNA quality (Shieh et al., 2018).”
From Robust single-nucleus RNA sequencing reveals depot-specific cell population dynamics in adipose tissue remodeling during obesity (2025) · cites this paper as Shieh et al., 2018
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- [1]Li M, Reilly C. Assessing the quality of hybridized RNA in Affymetrix GeneChips using linear regression. J Biomol Tech. 2008; 19(2): 122– 8.; PubMed Central PMCID: PMCPMC2361161. 19137095 PMC2361161
- [2]Viljoen KS, Blackburn JM. Quality assessment and data handling methods for Affymetrix Gene 1.0 ST arrays with variable RNA integrity. BMC Genomics. 2013; 14: 14 doi: 10.1186/1471-2164-14-14; PubMed Central PMCID: PMCPMC3557148. 23324084 PMC3557148 · DOI
- [3]Popova T, Mennerich D, Weith A, Quast K. Effect of RNA quality on transcript intensity levels in microarray analysis of human post-mortem brain tissues. BMC Genomics. 2008; 9: 91 doi: 10.1186/1471-2164-9-91; PubMed Central PMCID: PMCPMC2268927. 18298816 PMC2268927 · DOI
- [4]Chen EA, Souaiaia T, Herstein JS, Evgrafov OV, Spitsyna VN, Rebolini DF, et al Effect of RNA integrity on uniquely mapped reads in RNA-Seq. BMC Res Notes. 2014; 7: 753 doi: 10.1186/1756-0500-7-753; PubMed Central PMCID: PMCPMC4213542. 25339126 PMC4213542 · DOI
- [5]Reiman M, Laan M, Rull K, Sober S. Effects of RNA integrity on transcript quantification by total RNA sequencing of clinically collected human placental samples. FASEB J. 2017; 31(8): 3298– 308. doi: 10.1096/fj.201601031RR. 28446590 · DOI
- [6]Le Page C, Kobel M, de Ladurantaye M, Rahimi K, Madore J, Babinszky S, et al Specimen quality evaluation in Canadian biobanks participating in the COEUR repository. Biopreserv Biobank. 2013; 11(2): 83– 93. doi: 10.1089/bio.2012.0044. 24845429 · DOI
- [7]Wang TH, Chen CC, Liang KH, Chen CY, Chuang WY, Ueng SH, et al A Multivariate Evaluation of Factors Affecting the Quality of Freshly Frozen Tissue Specimens. Biopreserv Biobank. 2017; 15(4): 344– 9. doi: 10.1089/bio.2016.0104. 28541714 · DOI
- [8]Hostein I, Stock N, Soubeyran I, Marty M, De Mascarel I, Bui M, et al Nucleic acid quality preservation by an alcohol-based fixative: comparison with frozen tumors in a routine pathology setting. Diagnostic molecular pathology: the American journal of surgical pathology, part B. 2011; 20(1): 52– 62. doi: 10.1097/PDM.0b013e3181e71ba5. 21326040 · DOI
- [9]Hatzis C, Sun H, Yao H, Hubbard RE, Meric-Bernstam F, Babiera GV, et al Effects of tissue handling on RNA integrity and microarray measurements from resected breast cancers. J Natl Cancer Inst. 2011; 103(24): 1871– 83. doi: 10.1093/jnci/djr438; PubMed Central PMCID: PMCPMC3243675. 22034635 PMC3243675 · DOI
- [10]Shabihkhani M, Lucey GM, Wei B, Mareninov S, Lou JJ, Vinters HV, et al The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings. Clinical biochemistry. 2014; 47(4–5): 258– 66. doi: 10.1016/j.clinbiochem.2014.01.002; PubMed Central PMCID: PMCPMC3982909. 24424103 PMC3982909 · DOI
- [11]Heumuller-Klug S, Sticht C, Kaiser K, Wink E, Hagl C, Wessel L, et al Degradation of intestinal mRNA: a matter of treatment. World J Gastroenterol. 2015; 21(12): 3499– 508. doi: 10.3748/wjg.v21.i12.3499; PubMed Central PMCID: PMCPMC4375571. 25834314 PMC4375571 · DOI
- [12]Wang Y, Zheng H, Chen J, Zhong X, Wang Y, Wang Z, et al The Impact of Different Preservation Conditions and Freezing-Thawing Cycles on Quality of RNA, DNA, and Proteins in Cancer Tissue. Biopreserv Biobank. 2015; 13(5): 335– 47. doi: 10.1089/bio.2015.0029. 26484573 · DOI
- [13]Martin NM, Cooke KM, Radford CC, Perley LE, Silasi M, Flannery CA. Time course analysis of RNA quality in placenta preserved by RNAlater or flash freezing. Am J Reprod Immunol. 2017; 77(4). doi: 10.1111/aji.12637; PubMed Central PMCID: PMCPMC5397349. 28138995 PMC5397349 · DOI
- [14]Hawley D, Aluri H, Armaos H, Kim G, Kublin C, Zoukhri D. Human postmortem lacrimal and submandibular glands stored in RNAlater are suitable for molecular, biochemical, and cell biological studies. Mol Vis. 2016; 22: 1221– 8.; PubMed Central PMCID: PMCPMC5070571. 27777501 PMC5070571
- [15]Roos-van Groningen MC, Eikmans M, Baelde HJ, de Heer E, Bruijn JA. Improvement of extraction and processing of RNA from renal biopsies. Kidney Int. 2004; 65(1): 97– 105. doi: 10.1111/j.1523-1755.2004.00366.x. 14675040 · DOI
- [16]Viertler C, Groelz D, Gundisch S, Kashofer K, Reischauer B, Riegman PH, et al A new technology for stabilization of biomolecules in tissues for combined histological and molecular analyses. J Mol Diagn. 2012; 14(5): 458– 66. doi: 10.1016/j.jmoldx.2012.05.002. 22749745 · DOI
- [17]Berger SL. Isolation of cytoplasmic RNA: ribonucleoside-vanadyl complexes. Methods in enzymology. 1987; 152: 227– 34.. 2443795
- [18]Liakh LA, Khil'ko SN, Aspetov RD, Nosik DN, Novokhatskii AS. [ Purification and identification of mRNA of immune (gamma) interferon from human splenocytes]. Biokhimiia. 1983; 48(10): 1739– 46.. 6416307
- [19]Berger SL, Birkenmeier CS. Inhibition of intractable nucleases with ribonucleoside—vanadyl complexes: isolation of messenger ribonucleic acid from resting lymphocytes. Biochemistry. 1979; 18(23): 5143– 9.. 497174
- [20]del Prete MJ, Vernal R, Dolznig H, Mullner EW, Garcia-Sanz JA. Isolation of polysome-bound mRNA from solid tissues amenable for RT-PCR and profiling experiments. Rna. 2007; 13(3): 414– 21. doi: 10.1261/rna.79407; PubMed Central PMCID: PMCPMC1800518. 17237355 PMC1800518 · DOI
- [21]Nicolaides NC, Stoeckert CJ Jr. A simple, efficient method for the separate isolation of RNA and DNA from the same cells. Biotechniques. 1990; 8(2): 154– 6.. 1690560
- [22]Frazier AD, Champney WS. The vanadyl ribonucleoside complex inhibits ribosomal subunit formation in Staphylococcus aureus. The Journal of antimicrobial chemotherapy. 2012; 67(9): 2152– 7. doi: 10.1093/jac/dks182; PubMed Central PMCID: PMCPMC3417690. 22643191 PMC3417690 · DOI
- [23]Frazier AD, Champney WS. Inhibition of ribosomal subunit synthesis in Escherichia coli by the vanadyl ribonucleoside complex. Curr Microbiol. 2013; 67(2): 226– 33. doi: 10.1007/s00284-013-0350-5; PubMed Central PMCID: PMCPMC3696395. 23512123 PMC3696395 · DOI
- [24]Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, et al Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc. 2012; 7(3): 562– 78. doi: 10.1038/nprot.2012.016; PubMed Central PMCID: PMCPMC3334321. 22383036 PMC3334321 · DOI
- [25]Smith JJ, Gunasekera TS, Barardi CR, Veal D, Vesey G. Determination of Cryptosporidium parvum oocyst viability by fluorescence in situ hybridization using a ribosomal RNA-directed probe. J Appl Microbiol. 2004; 96(2): 409– 17.. 14723702
- [26]Reddy KJ, Gilman M. Preparation of bacterial RNA. Curr Protoc Mol Biol. 2001;Chapter 4:Unit4 doi: 10.1002/0471142727.mb0404s21. 18265238 · DOI
- [27]Lee CH, Leeds P, Ross J. Purification and characterization of a polysome-associated endoribonuclease that degrades c-myc mRNA in vitro. The Journal of biological chemistry. 1998; 273(39): 25261– 71.. 9737991
- [28]Tregidgo C, Levitt JA, Suhling K. Effect of refractive index on the fluorescence lifetime of green fluorescent protein. Journal of biomedical optics. 2008; 13(3): 031218 doi: 10.1117/1.2937212. 18601542 · DOI
- [29]Suhling K, Siegel J, Phillips D, French PM, Leveque-Fort S, Webb SE, et al Imaging the environment of green fluorescent protein. Biophys J. 2002; 83(6): 3589– 95. doi: 10.1016/S0006-3495(02)75359-9; PubMed Central PMCID: PMCPMC1302434. 12496126 PMC1302434 · DOI
- [30]Gray JC. The inhibition of ribonuclease activity and the isolation of polysomes from leaves of the french bean, Phaseolus vulgaris. Arch Biochem Biophys. 1974; 163(1): 343– 8.. 4369318
- [31]Berger SL, Hitchcock MJ, Zoon KC, Birkenmeier CS, Friedman RM, Chang EH. Characterization of interferon messenger RNA synthesis in Namalva cells. J Biol Chem. 1980; 255(7): 2955– 61.. 7358718
- [32]Egberts E, Hackett PB, Traub P. Inhibition of ribonucleases by ribonucleotides and transition state analogs in cell-free extracts from Ehrlich ascites tumor cells. Hoppe Seylers Z Physiol Chem. 1977; 358(4): 475– 90.. 324884
- [33]Dickson KA, Haigis MC, Raines RT. Ribonuclease inhibitor: structure and function. Prog Nucleic Acid Res Mol Biol. 2005; 80: 349– 74. doi: 10.1016/S0079-6603(05)80009-1; PubMed Central PMCID: PMCPMC2811166. 16164979 PMC2811166 · DOI
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Sorted by citations
So, J., Strobel, O., Wann, J., Kim, K., Paul, A., Acri, D. J., Dabin, L. C., Kim, J., Peng, G., & Roh, H. C. (2025) · eLife · doi:10.7554/elife.97981 · Cited by 18 · see citing works
- Authors
- Shieh, T.-M., Chen, C.-Y., Hsueh, C., Yu, C.-C., Chen, C.-C., & Wang, T.-H.
- Affiliations
- China Medical University (TW)
- Chang Gung University of Science and Technology (TW)
- Chang Gung Memorial Hospital (TW)
- Chung Shan Medical University (TW)
- Corresponding author
- Wang, Tong-Hong
- Venue
- PLOS ONE
- Publisher
- Public Library of Science (PLoS)
- Published
- 2018-03-14
- Volume
- 13
- Issue
- 3
- Pages
- e0194393
- ISSN
- 1932-6203 (ISSN-L)
- PMC
- PMC5851642
- OpenAlex
- W2793522306
- Cited by
- 12
- References
- 0
- Citations by year
- 2025: 2 · 2024: 3 · 2023: 3 · 2022: 1 · 2020: 3
- FWCI
- 0.27
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- PLoS ONE (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Ministry of Science and Technology, Taiwan (MOST 105-2320-B-182A-004-)
- Chang Gung Medical Foundation (CRRPG3F0071)
- Topics
- Physical Sciences › Chemistry › Inorganic Chemistry › Vanadium and Halogenation Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Molecular Biology Techniques and Applications
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Keywords
- RNA degradation, cryopreservation, tissue banking, RNAlater, DNA integrity, protein activity, tissue morphology, sample preservation
- MeSH terms
- Animals, Male, Mice, Inbred BALB C, Ribonucleosides, Tissue Preservation, Vanadates, Organ Preservation Solutions, RNA Stability, Mice, Protein Stability
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