Complex‐centric proteome profiling by SEC‐SWATH‐MS

Cited by (140)

Items 101–140 of 140

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4. High-Resolution Complexome Profiling by Cryoslicing BN-MS Analysis
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10. Rv1985c-Driven Transcriptional Network Rewiring Underlies Lineage-Specific Phenotypes in Mycobacterium tuberculosis
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12. Towards a systematic characterization of protein complex function: a natural language processing and machine-learning framework
    Varun S. Sharma, Andrea Fossati, Rodolfo Ciuffa, Marija Buljan, Evan G. Williams, Zhen Chen, Wenguang Shao, Patrick G. A. Pedrioli, Anthony Wayne Purcell, María Rodríguez Martínez et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
13. Integrated multi-omics reveals anaplerotic insufficiency in methylmalonyl-CoA mutase deficiency
    Patrick Forny, Ximena Bonilla, David Lamparter, Wenguang Shao, Tanja Plessl, Caroline Frei, Anna Bingisser, Sandra Götze, Audrey van Drogen, Keith Harshman et al. · 2022 · medRxiv
14. A Chromatography-Guided Co-Fractionation Mass Spectrometry Strategy for Rapid Profiling of Drug-Perturbed Protein Complexes
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15. An Enigma of N-termini dependent protein degradation
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16. Capturing protein-protein interactions in plants: recent advances, challenges, and opportunities
    Berry Dickey, Yatendra Singh, Sirapa Maharjan, Yongjian Qiu, Sixue Chen · 2026 · Frontiers in Molecular Biosciences
17. mini-Complexome Profiling (mCP), an FDR-controlled workflow for global targeted detection of protein complexes
    Hugo Amedei, Niels Benjamin Paul, Brian Foo, Lisa Neuenroth, Stephan E. Lehnart, Henning Urlaub, Christof Lenz · 2024 · Frontiers in Analytical Science
18. Integrated Immunoprecipitation: Blue Native Gel Electrophoresis—Mass Spectrometry for the Identification of Protein Subcomplexes
    Sophie J. F. van der Spek, August Benjamin Smit, Nikhil Janak Pandya · 2019 · Neuromethods
19. Proteome-transcriptome alignment of molecular portraits achieved by self-contained gene set analysis: Consensus colon cancer subtypes case study
    Galina V. Glazko, Boris L. Zybailov, Frank Emmert‐Streib, Ancha V. Baranova, Yasir Rahmatallah · 2019 · PLoS ONE
20. Moving beyond the current limits of data analysis in longevity and healthy lifespan studies
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21. Systematic dissection of phosphorylation-dependent YAP1 complex formation elucidates a key role for PTPN14 in Hippo signal integration
    Federico Uliana, Rodolfo Ciuffa, Ranjan Kumar Mishra, Andrea Fossati, Fabian Frommelt, Martin Mehnert, Eivind Salmorin Birkeland, Matthias Peter, Nicolas Tapon, Ruedi H. Aebersold et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
22. OMICS – Mass Spectrometry-Based Proteomics in Systems Biology Research
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23. A Multiplexed SEC-MS Approach to Systematically Study the Interplay Between Protein Assembly-States and Phosphorylation Events
    Ella Doron‐Mandel, Benjamin J. Bokor, Yanzhe Ma, Lena Annika Street, Lauren C. Tang, Ahmed A. Abdou, Neel H. Shah, George Rosenberger, Marko Jovanović · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
24. DIP-MS: A novel ultra-deep interaction proteomics for the deconvolution of protein complexes
    Fabian Frommelt, Andrea Fossati, Federico Uliana, Fabian Wendt, Peng Xue, Moritz Heusel, Bernd Wollscheid, Ruedi H. Aebersold, Rodolfo Ciuffa, Matthias Gstaiger · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
25. Elucidation of protein-protein interactions in mitochondria by cross-linking mass spectrometry
    A. Linden · 2020 · eDiss (Georg-August-Universität Göttingen)
26. Phospholamban - Identification of novel interaction partners
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27. Multiplexed profiling of kinase interactomes quantifies cellular network plasticity
    Martin G. Golkowski, Andrea Lius, Tanmay Sapre, Ho-Tak Lau, Taylor Moreno, Dustin J. Maly, Shao‐En Ong · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
28. Discovery of Native Protein Complexes by Liquid Chromatography Followed by Quantitative Mass Spectrometry
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29. Elucidating the dynamic remodelling of Escherichia coli interactome in different growth conditions using multiplex co‐fractionation MS (mCF‐MS)
    Teck Yew Low · 2023 · PROTEOMICS
30. Strategy for Experimental Studies of Target Protein Interactomics
    P. Ershov, Y. Mezentsev, E. Yablokov, L. Kaluzhskiy, O. Gnedenko, A. Gilep, A. S. Ivanov · 2024 · Biomedical Chemistry Research and Methods
31. ProteoAutoNet: high-throughput co-eluted protein analysis with robotics and a multi-database search strategy
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32. HIT-MAP: A Scalable Approach to Multimodal Mapping of Subcellular Organization
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33. Dissect Protein Interactions Using Mass Spectrometry
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34. Complex assembly and activity states as multifaceted protein attributes explaining phenotypic variability
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35. Unifying proteomic technologies with ProteinProjector
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38. Practices for shrimp disease detection, control, management, and genetics improvement
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40. Quantitative interactome mapping of skeletal muscle insulin resistance
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