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High-pH reversed-phase chromatography with fraction concatenation for 2D proteomic analysis
Open accessAbstract
Orthogonal high-resolution separations are critical for attaining improved analytical dynamic range and protein coverage in proteomic measurements. High-pH reversed-phase liquid chromatography (RPLC), followed by fraction concatenation, affords better peptide analysis than conventional strong cation-exchange chromatography applied for 2D proteomic analysis. For example, concatenated high-pH RPLC increased identification of peptides (by 1.8-fold) and proteins (by 1.6-fold) in shotgun proteomics analyses of a digested human protein sample. Additional advantages of high-pH RPLC with fraction concatenation include improved protein sequence coverage, simplified sample processing and reduced sample losses, making this an attractive alternative to strong cation-exchange chromatography in conjunction with second-dimension low-pH RPLC for 2D proteomics analyses.
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Cites
Large-scale phosphorylation analysis of mouse liver
Villén, J., Beausoleil, S. A., Gerber, S. A., & Gygi, S. P. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0609836104 · Cited by 730
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Khan, S. A., Wollaston-Hayden, E. E., Markowski, T. W., Higgins, L., & Mashek, D. G. (2015) · Journal of Lipid Research · doi:10.1194/jlr.m056812 · Cited by 64
Metadata
- Authors
- Yang, F., Shen, Y., Camp, D. G., & Smith, R. D.
- Venue
- Expert Review of Proteomics
- Publisher
- Informa UK Limited
- Published
- 2012-04
- Volume
- 9
- Issue
- 2
- Pages
- 129-134
- ISSN
- 1478-9450 (ISSN-L)
- 1744-8387
- OpenAlex
- W2052365638
- Cited by
- 294
- References
- 1
- FWCI
- 5.59
- Type
- journal article
- Language
- en
- Open access
- green
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- Yang, F., Shen, Y., Camp, D. G., & Smith, R. D. (2012). High-pH reversed-phase chromatography with fraction concatenation for 2D proteomic analysis. Expert Review of Proteomics. https://doi.org/10.1586/epr.12.15
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