PreprintCited by 140Machine Learning in Materials ScienceArtificial Intelligence ApplicationsVarious Chemistry Research Topics

Accelerated end-to-end chemical synthesis development with large language models

Open access
Ruan, Yixiang, Lu, Chenyin, Xu, Ning, Zhang, Jian, Xuan, Jun, Pan, Jianzhang, Fang, Qun, Gao, Hanyu +4 more·2024·Nature Communications

Abstract

The rapid emergence of large language model (LLM) technology presents significant opportunities to facilitate the development of synthetic reactions. In this work, we leveraged the power of GPT-4 to build a multi-agent system to handle fundamental tasks involved throughout the chemical synthesis development process. The multi-agent system comprises six specialized LLM-based agents, including Literature Scouter, Experiment Designer, Hardware Executor, Spectrum Analyzer, Separation Instructor, and Result Interpreter, which are pre-prompted to accomplish the designated tasks. A web application was built with the multi-agent system as the backend to allow chemist users to interact with experimental platforms and analyze results via natural language, thus, requiring zero-coding skills to allow easy access for all chemists. We demonstrated this multi-agent system on the development of a recently developed copper/TEMPO catalyzed aerobic alcohol oxidation to aldehyde reaction, and this LLM multi-agent copiloted end-to-end reaction development process includes: literature search and information extraction, substrate scope and condition screening, reaction kinetics study, reaction condition optimization, reaction scale-up and product purification. This work showcases the trilogy among chemist users, LLM-based agents, and automated experimental platforms to reform the traditional expert-centric and labor-intensive reaction development workflow.

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Crossref · 10.26434/chemrxiv-2024-6wmg4

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Authors
Ruan, Y., Lu, C., Xu, N., Zhang, J., Xuan, J., Pan, J., Fang, Q., Gao, H., Shen, X., Ye, N., Zhang, Q., & Mo, Y.
Affiliations
  • Zhejiang University (CN)
  • Zhejiang University
  • Hong Kong University of Science and Technology (HK)
  • Novartis (China) (CN)
  • Rezubio Pharmaceuticals Co. Ltd.
Corresponding author
Mo, Yiming
Venue
Nature Communications
Published
2024-05-07
Volume
15
Issue
1
Pages
10160-10160
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4404641323
Cited by
140
References
4
Citations by year
2026: 84 · 2025: 50 · 2024: 6
FWCI
13.19
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by-nc-nd)
  • ChemRxiv (acceptedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • The Novartis Repository (Novartis) (acceptedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
  • Rare & Special e-Zone (The Hong Kong University of Science and Technology) (submittedVersion)
Funders
National Natural Science Foundation of China (22478335, 22108242, 22227812)
Topics
  • Physical Sciences › Materials Science › Materials Chemistry › Machine Learning in Materials Science
  • Physical Sciences › Computer Science › Artificial Intelligence › Artificial Intelligence Applications
  • Physical Sciences › Chemistry › Physical and Theoretical Chemistry › Various Chemistry Research Topics
Keywords
large language models, GPT-4, LLM agents, aerobic oxidation of alcohols, reaction condition optimization, reaction kinetics, product purification, nucleophilic aromatic substitution, web application
MeSH terms
Alcohols, Aldehydes, Catalysis, Copper, Cyclic N-Oxides, Kinetics, Oxidation-Reduction, Software, Chemistry Techniques, Synthetic

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