Mouse Microbiota Models: Comparing Germ-Free Mice and Antibiotics Treatment as Tools for Modifying Gut Bacteria

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    Natalie Rutkowski, Brenda Yang, Elise F. Gray-Gaillard, Anna Ruta, Joscelyn C. Mejías, Michael Patatanian, Christopher Cherry, Nazmiye Celik, Katlin B. Stivers, Shri Ramanujam et al. · 2025 · Proceedings of the National Academy of Sciences
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    Ziyun Zhou, Arianna Lamanna, Rashi Halder, Emeline Pansart, Shaman Narayanasamy, Besma Boussoufa, Thamila Kerkour, Paul Wilmes, Evan G. Williams · 2026 · Microbiome
  33. Gut Microbiota: A New Marker of Cardiovascular Disease
    Giulia Pontarollo, Klytaimnistra Kiouptsi, Franziska Bayer, Christoph Reinhardt · 2021 · Elsevier eBooks
  34. The role of microbiota-gut-brain axis in neurodegenerative diseases: biochemical and therapeutic aspects
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    Jorge López‐Tello, Zoe Schofield, Raymond Kiu, Matthew J. Dalby, Douwe van Sinderen, Gwénaëlle Le Gall, Amanda Nancy Sferruzzi-Perri, Lindsay J. Hall · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
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  51. Caenorhabditis elegans model for in vivo screening of human gut microbiota mediated colonization and colonization resistance against Clostridioides difficile
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  54. Fecal Bacterial community and potential pathogens from Sunda Porcupine (Hystrix javanica) based on nanopore 16S rRNA amplicon sequencing
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  55. Effects of Antibiotics on the Uterine Microbial Community of Mice
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  56. Elucidating the role of microbes in celiac disease through gnotobiotic modeling
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  58. The microbiome is dispensable for normal respiratory function and chemoreflexes in mice
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  59. Commensal bacteria education history calibrates the naivety and activation threshold of adaptive antiviral immune system
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  61. Role of gut microbiome in pathogenesis and treatment of diseases: Multidisciplinary experts’ opinion of the Asian Medical Experts Academy (AMEA)
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  64. Differential microbial community assembly following co-housing versus microbiota transplant
    James S. Weagley, Luis Alberto Chica Cárdenas, Ana Romani, Meagan E. Sullender, Somya Aggarwal, Heyde Makimaa, Michael P. Hogarty, Rachel Rodgers, Elizabeth A. Kennedy, Lynne R. Foster et al. · 2025 · The ISME Journal
  65. Intestinal microbiota regulates naïve lymphocyte migration in Peyer’s patches
    Johanna Kabbert, Anne Kaminski, Oliver Pabst, Milas Ugur · 2025 · Frontiers in Immunology
  66. The hologenome in brain health and disease
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  67. DPO production by gut commensals suggests a broader role in bacterial communication and host-microbiome interactions
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  68. Gut Microbiota and Colorectal Cancer: Is Microbial Dysbiosis in Carcinogenesis an Emerging Risk Factor?
    Olurotimi J. Badero, Emmanuel S. Meribole, Olutomiwa Ayoola Omokore, Ibrahim Olalekan Quadri, Perelade Jojo Kingdom, Ifeanyichukwu C. Ogbuiyi-Chima, Samuel O Ogunnoiki, Precious M. Samuel-Ogunnoiki, Olaitan Oluwadara Adeyoola, Bamikole Tosin Osibowale et al. · 2026 · Cureus
  69. Cross-talking between polycystic ovarian syndrome and gut microbiome: a comprehensive review
    Sudrita Roy Choudhury, Samarpita Koner, Rajen Dey · 2026 · Middle East Fertility Society Journal
  70. Modeling versatility as the hallmark of model organisms
    Guido I. Prieto, Alejandro Fábregas‐Tejeda · 2026 · History & Philosophy of the Life Sciences
  71. Disruption of the gut microbiota in regulator of G protein signaling 14 knockout (RGS14 KO) mice alters the metabolome and reduces enhanced exercise capacity
    Candace R. Longoria, Daniel D. DeSio, Marko K. Oydanich, Xiaoyang Su, Eric N. Chiles, Lee J. Kerkhof, Olufunmilola A. Ibironke, Max M. Häggblom, Nathan P. Wages, John J. Guers et al. · 2026 · European Journal of Applied Physiology
  72. The role of the gut microbiome in nicotine withdrawal and dependence
    Eda Köşeli, Katarzyna M. Tyc, Belle Buzzi, Hamid I. Akbarali, Mohamad Imad Damaj · 2026 · Nicotine & Tobacco Research
  73. Gestational dysbiosis is associated with altered early-life microbial seeding and favors pathobiont expansion in offspring
    Mohammed Moutaz Nakhal, Faheema Nafees, Ayishal B. Mydeen, Ibrahim Baydoun, Mohammad I. K. Hamad · 2026 · iScience
  74. Alternative antibiotic regimens improve palatability and welfare in mice for gut bacterial depletion
    Kaoutar Abaakil, Yang Bi, Laetitia Firmenich, Xuan Yang, Mariam Alireza, Shahriar Mueed, Monica Campos, Marko Storch, Despoina Chrysostomou, Julian Roberto Marchesi et al. · 2026 · Lab Animal
  75. Early-life Gut Microbiota and Allergic Diseases: Immune Regulatory Mechanisms and Intervention Progress
    Lei Yu, Maolan Wu, Ting Fan Leung, Xiangrong Zheng · 2026 · Clinical Reviews in Allergy & Immunology
  76. Distinct compositional changes but shared quantitative microbiome and anti-inflammatory modulations by diet
    Hannah K. Ruple, Lynn Schintgen, Eva Haasis, Alena M. Bubeck, Sarah Schlaudt, Anna Ewertz, Clara-Sophie Dobeleit, Yvonne Soltow, Axel Lorentz, W. Florian Fricke · 2026 · Cell Reports
  77. Value of Vitamin D Administration Versus Suppressing Gut Microbiota in Modifying Metabolic Associated Osteoarthritis in Rats
    Mie Gomaa, Safya Ebraheem Esmaeel · 2020 · The Medical Journal of Cairo University/The Medical Journal of Cairo University
  78. From Standard to Region-specific Monocrops
    Diego Silva Garzón · 2021 · Swiss Journal of Sociocultural Anthropology
  79. Gut Microbiota and Immune Responses
    Tobin Lee · 2022 · Science Insights
  80. Kinetic and mechanistic diversity of intestinal immune homeostasis characterized by rapid removal of gut bacteria
    Da-Jung Jung, Ledia Gebremedhin, Byoungsook Goh, Ji‐Sun Yoo, Francesca S. Gazzaniga, Dennis Lee Kasper, Sungwhan F. Oh · 2023 · Gut Microbes
  81. The Gut Microbiome, a Possible Key to Multidisciplinary Clinical Practice - Literature Review
    Cristina Gabriela Șchiopu, Radu Sebastian Gavril, Cristinel Ștefănescu, Irina Eşanu, Florin Mitu · 2023 · Internal Medicine
  82. Interplay Between Gut-microbiota and Neurodegeneration
    Sumel Ashique, Radheshyam Pal, Shubneesh Kumar, Bharti Verma, Nitish Kumar, Ivan Kahwa, Arshad Farid, Neeraj Mishra, Prashant Kumar, Farzad Taghizadeh‐Hesary · 2024 · BENTHAM SCIENCE PUBLISHERS eBooks
  83. The enduring effects of antimicrobials and lipopolysaccharide on the cellular mechanisms and behaviours associated with neurodegeneration in pubertal male and female CD1 mice
    Pasquale Esposito, Eleni Dubé‐Zinatelli, Michelle Gandelman, Ella Liu, Luna Cappelletti, Jacky Liang, Nafissa Ismail · 2024 · Neuroscience
  84. The Efficacy of Fecal Microbiota Transplantation in Mouse Models Infected with Clostridioides difficile from the Perspective of Metabolic Profiling: A Systematic Review
    Anna Voziki, Olga Deda, Melina Kachrimanidou · 2024 · Metabolites
  85. The Future of Gastrointestinal Physiology: 2020 and Beyond
    Stephen Jacob Pandol · 2021 · Frontiers in Physiology
  86. Nursing care of the pediatric patient following strabismus repair surgery.
    Bernadette Nickerson · 2002 · PubMed
  87. Defining the role of individual gut commensal microbes and host-microbe interactions
    Tingting Ju · 2019 · ERA: Education and Research Archive (University of Alberta)
  88. Microbiota-Independent Antiviral Effects of Antibiotics on Enteric Viruses
    Mikal A. Woods Acevedo, Julie K. Pfeiffer · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  89. Extracellular Vesicles From a Gut Symbiont Mediate Adenosinergic Responses to Promote Immune Tolerance
    Tao Xu, Lidan Zhao, Md Zohorul Islam, Loc Pham, Martina Sassone‐Corsi, Ramnik J. Xavier, Christophe O. Benoist, Aleksandar David Kostic · 2022 · SSRN Electronic Journal
  90. Microbiota In Vivo Imaging Approaches to Study Host-Microbe Interactions in Preclinical and Clinical Settings
    Giuseppina Campisciano, Stefania Biffi · 2022 · SSRN Electronic Journal
  91. The laboratory mouse
    Kathleen R. Pritchett‐Corning, Joseph Paul Garner · 2024 · Wiley eBooks
  92. Antibiotic-associated neutropenia is marked by depletion of intestinal Lachnospiraceae in pediatric patients
    Josaura Fernandez Sanchez, Rachel Rodgers, Arushana Maknojia, Nusrat Shaikh, Hannah H. Yan, Marlyd E. Mejia, Hope Hendricks, Robert R. Jenq, Pavan R. Reddy, Ritu Banerjee et al. · 2024 · medRxiv
  93. Modeling A Western Lifestyle in Mice: A Novel Approach to Eradicating Aerobic Spore-Forming Bacteria from the Colonic Microbiome and Assessing Long Term Clinical Outcomes.
    Edward Horwell, William T. Ferreira, Huynh A. Hong, Philip E. Bearn, Simon M. Cutting · 2024 · Preprints.org
  94. Commensal enteric virome regulates intestinal carbohydrate sensing via Th17 cells
    Fengqing Lin, Lianglan Li, Yuanpeng He, Shujie Xu, Qiufen Mo, Wangsen Cao, Aikun Fu, Weiqin Li · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  95. Gut Competition Dynamics of Live Bacterial Therapeutics Are Shaped by Microbiome Complexity, Diet, and Therapeutic Transgenes
    Nicole Siguenza, Sharyl Bailey, Mohammad Sadegi, Hanna Gootin, Maria Denalene Tiu, Jeffrey D. Price, Amanda E. Ramer‐Tait, Amir Zarrinpar · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  96. Antibiotic-induced microbiota depletion impairs the pro-regenerative response to a biological scaffold in mice
    Natalie Rutkowski, Brenda Yang, Elise F. Gray-Gaillard, Anna Ruta, Joscelyn C. Mejías, Michael Patatanian, Christopher Cherry, Katlin B. Stivers, Shri Ramanujam, Nathan L. Price et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  97. Dual Oxygen-Partitioned Co-Culture Uncovers Microbe-Specific Epithelial Stress and Homeostatic Programs
    Jae-Eun Lee, Taewon Kim, Seongwon Park, Ji Young Lee, Kyoung Su Kim, Hong Koh, Keunwook Lee, Dong-Woo Lee, Nam Joo Kang · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  98. Single-Cell RNA Sequencing Reveals Commensal Microbes Amplify Sex-Specific Immune Programming in the Murine Lung
    Alexandra Melton, Krista Ferrari, Joseph P. Hoffmann, Kejing Song, Jay K. Kolls, Janet E. McCombs · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  99. Impact of polyphenols and feeding rhythms on the immunomodulation properties of the probiotic bacteria in the gastro-intestinal tract
    Alissar Al Tarraf · 2021 · theses.fr (ABES)
  100. The microbiome and incurable diseases: discussion review
    Shimon E. Shatzmiller, Galina Zats, Inbal Lapidot, Rami Krieger · 2019 · Journal of Microbiology & Experimentation